Rmu_sc0004524.1_g000011

heat shock protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004524.1
N/A
Physical Location & Seq
Forward (+)
52391 .. 52845
455 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 252 bp
atggaactgagaagaccattgaaaaaggagatcagtgatgatgaagaggttgaacccaagaaagaagaagaaagagttattgaggaagttgatgaggacaacgagaaagaggcaaagaagaaaaagaagatcaaggatgtttctcacgacatttttctgtggaagggctgcttgaatttcaaagtcgtcctctttgtcccaaagcgggcacaatttgacttgtttgacaccagaaagaagatgaacaactag

Protein Analysis

83

Amino Acids

10.05

Weight (kDa)

6.61

Isoelectric Point (pI)

54.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 205
AcsI RAATTY 1 cut(s) 175
AfiI CCNNNNNNNGG 1 cut(s) 205
AgsI TTSAA 4 cut(s) 22, 53, 175, 181
ApeKI GCWGC 1 cut(s) 168
ApoI RAATTY 1 cut(s) 175
BaeGI GKGCMC 1 cut(s) 211
BbsI GAAGAC 1 cut(s) 19
BbvI GCAGC 1 cut(s) 155
BfaI CTAG 1 cut(s) 250
BisI GCNGC 1 cut(s) 169
BlsI GCNGC 1 cut(s) 170
BpiI GAAGAC 1 cut(s) 19
Bsc4I CCNNNNNNNGG 1 cut(s) 205
BseGI GGATG 1 cut(s) 142
BseLI CCNNNNNNNGG 1 cut(s) 205
BseSI GKGCMC 1 cut(s) 211
BseXI GCAGC 1 cut(s) 155
BslFI GGGAC 1 cut(s) 182
BslI CCNNNNNNNGG 1 cut(s) 205
BsmFI GGGAC 1 cut(s) 182
Bsp1286I GDGCHC 1 cut(s) 211
Bsp143I GATC 2 cut(s) 30, 129
BspACI CCGC 1 cut(s) 205
BssMI GATC 2 cut(s) 30, 129
Bst6I CTCTTC 1 cut(s) 39
BstC8I GCNNGC 1 cut(s) 207
BstDEI CTNAG 1 cut(s) 8
BstF5I GGATG 1 cut(s) 142
BstKTI GATC 2 cut(s) 33, 132
BstMBI GATC 2 cut(s) 30, 129
BstSLI GKGCMC 1 cut(s) 211
BstV1I GCAGC 1 cut(s) 155
BstV2I GAAGAC 1 cut(s) 19
BtsCI GGATG 1 cut(s) 142
BtsIMutI CAGTG 1 cut(s) 40
Cac8I GCNNGC 1 cut(s) 207
CviJI RGCY 1 cut(s) 168
CviKI_1 RGCY 1 cut(s) 168
DdeI CTNAG 1 cut(s) 8
DpnI GATC 2 cut(s) 32, 131
DpnII GATC 2 cut(s) 30, 129
Eam1104I CTCTTC 1 cut(s) 39
EarI CTCTTC 1 cut(s) 39
FalI AAGNNNNNCTT 2 cut(s) 155, 187
FaqI GGGAC 1 cut(s) 182
FauI CCCGC 1 cut(s) 198
Fnu4HI GCNGC 1 cut(s) 169
FokI GGATG 1 cut(s) 149
Fsp4HI GCNGC 1 cut(s) 169
FspBI CTAG 1 cut(s) 250
GluI GCNGC 1 cut(s) 169
Hpy188III TCNNGA 1 cut(s) 146
HpyAV CCTTC 1 cut(s) 157
HpyF3I CTNAG 1 cut(s) 8
Kzo9I GATC 2 cut(s) 30, 129
LpnPI CCDG 1 cut(s) 244
Lsp1109I GCAGC 1 cut(s) 155
MaeI CTAG 1 cut(s) 250
MalI GATC 2 cut(s) 32, 131
MboI GATC 2 cut(s) 30, 129
MboII GAAGA 7 cut(s) 24, 56, 77, 80, 130, 139, 250
MhlI GDGCHC 1 cut(s) 211
MluCI AATT 2 cut(s) 175, 212
MnlI CCTC 5 cut(s) 40, 76, 88, 103, 200
NdeII GATC 2 cut(s) 30, 129
PkrI GCNGC 1 cut(s) 170
SatI GCNGC 1 cut(s) 169
Sau3AI GATC 2 cut(s) 30, 129
SduI GDGCHC 1 cut(s) 211
SetI ASST 1 cut(s) 51
SgeI CNNG 8 cut(s) 70, 115, 145, 158, 184, 218, 232, 243
Sse9I AATT 2 cut(s) 175, 212
SsiI CCGC 1 cut(s) 205
SspMI CTAG 1 cut(s) 250
TasI AATT 2 cut(s) 175, 212
TscAI CASTG 1 cut(s) 40
TseI GCWGC 1 cut(s) 168
TspDTI ATGAA 1 cut(s) 57
TspRI CASTG 1 cut(s) 40
XapI RAATTY 1 cut(s) 175
XspI CTAG 1 cut(s) 250
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.