Rmu_sc0004655.1_g000001

Belongs to the glycosyltransferase 2 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004655.1
N/A
Physical Location & Seq
Reverse (-)
1565 .. 5701
4137 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2541 bp
atggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatggtcagttacatggtcagtgacatgaaattatacgaggacatggcggccaaaattggaaatgcagtgaacctaggccgcatttcagaagaagtgagatcaaaacataaaggcttttctcgatgggaatcatattcatcaaaacgtgaccatgaaaccattcttcaaatagtaattgatgggagagacccaaatgcaagagatgttgaagggtgtgcgttgccaactttggtgtatttggctcgggagaagagaccccagattcaccataacttcaaagctggtgctatgaatgctctgattagggtatcgtcaaatataagcaatgggaagttgattcttaatgtagactgtgacatgtattcaaacaactcgaaggccataagggatgcactctgcttcttaatggacgaagaacaaggccatgagattgcatacgtacagttcccgcagaatttcgataacctaaccaagaatgaattatacgcttcattacgagtatatttcgaggtggaattccatggcctggataattattgggggacaccatatattggaagtggatgctttcacagaagagaaactctttgtgggaagaaattcagcaaggtaaataagagtgagatgaaatgggaggacaaaaaaggtgaagaaattggcattcatgaattagaagaaagttcaaaaagtcttgcgagttgtacatttgaagagaacacacaatggggaaaggagatgggtttgaaatatgggtgtccggttgaagatgtgataacggcgttattgatccaatgccgaggatggaaatcagtgtattgcaatccaacaaggaaagctttcttaggattagctcctaccacattgcttcaggcacttgtgcagcataagagatggtcggaaggccaccttcagattacgctgtctaagtacagtgttgtatggtatggccgtggaaagattggtttaggccatcaacttggataccttcgctacaacttatgggctgctaattgctgggcaacactaatttactcaactcttccttcactttacctccttagaggcacgtccttatttcctcagaacattgggagctttgtggagtttctatggtgtggaggcacgagcttaggttggtggaacgaccaacgtatatggctttaccagagaacaacctcatacttatttgccttcatcgacaccattgtacactacctcggatacagagattcagcatttgtaataacagccaaggtggccgatgaagacgtgtccgaacgatatgagaaagaaatcatggaattcgggggctcgtctccaatgtttaccgtgctggcaacacttgcattgctcaatctgtactgctttgcctggtttctgaaggcagcaaccactggaacaaagggtattgcagaggtttatgagacaatgtccttgcagattcttctatgtgtggttttgattgtcattaacctaccgttgtacgaagccctatacctaaggaaggacaaggggaagttgccgagctctgtagcatttaagtcgatggcatttgctggatttgcttgcatatgttttaaatttctatattaa

Protein Analysis

846

Amino Acids

96.49

Weight (kDa)

4.65

Isoelectric Point (pI)

48.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cellulose_synt PF03552 328 - 524 5.9e-53 Cellulose synthase
Cellulose_synt PF03552 546 - 818 1.9e-31 Cellulose synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 1474, 1502
AccI GTMKAC 1 cut(s) 1296
AciI CCGC 3 cut(s) 995, 1027, 1397
AclWI GGATC 1 cut(s) 1729
AcoI YGGCCR 3 cut(s) 996, 1894, 2205
AcsI RAATTY 5 cut(s) 1402, 1463, 1547, 2249, 2528
AcuI CTGAAG 3 cut(s) 1799, 1841, 2348
AfaI GTAC 6 cut(s) 1389, 1651, 1877, 2157, 2309, 2432
AfiI CCNNNNNNNGG 3 cut(s) 1474, 1502, 2452
AflIII ACRYGT 2 cut(s) 1305, 2217
AgsI TTSAA 8 cut(s) 1115, 1157, 1225, 1314, 1632, 1658, 1693, 1712
AjiI CACGTC 2 cut(s) 2016, 2218
AjnI CCWGG 2 cut(s) 1473, 2318
AluBI AGCT 6 cut(s) 1229, 1784, 1799, 2043, 2076, 2475
AluI AGCT 6 cut(s) 1229, 1784, 1799, 2043, 2076, 2475
Alw21I GWGCWC 1 cut(s) 2477
Alw26I GTCTC 4 cut(s) 1128, 1195, 2268, 2366
AlwI GGATC 1 cut(s) 1729
Ama87I CYCGRG 1 cut(s) 1191
AoxI GGCC 9 cut(s) 996, 1024, 1326, 1369, 1471, 1849, 1894, 1915, 2205
ApeKI GCWGC 3 cut(s) 1828, 1952, 2333
ApoI RAATTY 5 cut(s) 1402, 1463, 1547, 2249, 2528
Asp700I GAANNNNTTC 3 cut(s) 1107, 1547, 1784
AspA2I CCTAGG 1 cut(s) 1021
AsuHPI GGTGA 2 cut(s) 1205, 1607
AvaI CYCGRG 1 cut(s) 1191
AvrII CCTAGG 1 cut(s) 1021
AxyI CCTNAGG 1 cut(s) 2447
BanII GRGCYC 2 cut(s) 2261, 2477
BauI CACGAG 1 cut(s) 2071
BbsI GAAGAC 1 cut(s) 2220
Bbv12I GWGCWC 1 cut(s) 2477
BbvI GCAGC 3 cut(s) 1840, 1939, 2345
BccI CCATC 7 cut(s) 1065, 1121, 1678, 1743, 1833, 1926, 2488
BceAI ACGGC 2 cut(s) 1740, 1881
BcgI CGANNNNNNTGC 2 cut(s) 2472, 2506
BciT130I CCWGG 2 cut(s) 1475, 2320
BciVI GTATCC 2 cut(s) 1922, 2162
BcoDI GTCTC 4 cut(s) 1128, 1195, 2268, 2366
BfaI CTAG 1 cut(s) 1022
BfmI CTRYAG 1 cut(s) 2478
BfuI GTATCC 2 cut(s) 1922, 2162
BglI GCCNNNNNGGC 1 cut(s) 2204
BisI GCNGC 5 cut(s) 996, 1027, 1829, 1953, 2334
BlnI CCTAGG 1 cut(s) 1021
BlsI GCNGC 5 cut(s) 997, 1028, 1830, 1954, 2335
Bme1390I CCNGG 2 cut(s) 1475, 2320
BmeT110I CYCGRG 1 cut(s) 1191
BmgBI CACGTC 2 cut(s) 2016, 2218
BmrFI CCNGG 2 cut(s) 1475, 2320
BmsI GCATC 2 cut(s) 1327, 1502
BpiI GAAGAC 1 cut(s) 2220
Bpu10I CCTNAGC 1 cut(s) 2077
BsaAI YACGTR 1 cut(s) 1387
BsaBI GATNNNNATC 2 cut(s) 1075, 1753
BsaI GGTCTC 2 cut(s) 1128, 1195
BsaJI CCNNGG 6 cut(s) 1021, 1468, 1744, 1897, 2164, 2199
BsaWI WCCGGW 1 cut(s) 1705
BsaXI ACNNNNNCTCC 2 cut(s) 1986, 2016
Bsc4I CCNNNNNNNGG 3 cut(s) 1474, 1502, 2452
Bse1I ACTGG 1 cut(s) 2347
Bse21I CCTNAGG 1 cut(s) 2447
Bse3DI GCAATG 3 cut(s) 1279, 1808, 2294
Bse8I GATNNNNATC 2 cut(s) 1075, 1753
BseBI CCWGG 2 cut(s) 1475, 2320
BseDI CCNNGG 6 cut(s) 1021, 1468, 1744, 1897, 2164, 2199
BseGI GGATG 3 cut(s) 1342, 1517, 1754
BseJI GATNNNNATC 2 cut(s) 1075, 1753
BseLI CCNNNNNNNGG 3 cut(s) 1474, 1502, 2452
BseMI GCAATG 3 cut(s) 1279, 1808, 2294
BseMII CTCAG 1 cut(s) 2042
BseNI ACTGG 1 cut(s) 2347
BseXI GCAGC 3 cut(s) 1840, 1939, 2345
BseYI CCCAGC 1 cut(s) 1962
BsgI GTGCAG 1 cut(s) 1847
BshFI GGCC 9 cut(s) 998, 1026, 1328, 1371, 1473, 1851, 1896, 1917, 2207
BsiHKAI GWGCWC 1 cut(s) 2477
BsiHKCI CYCGRG 1 cut(s) 1191
BsiSI CCGG 1 cut(s) 1706
BslFI GGGAC 1 cut(s) 1504
BslI CCNNNNNNNGG 3 cut(s) 1474, 1502, 2452
BsmAI GTCTC 4 cut(s) 1128, 1195, 2268, 2366
BsmBI CGTCTC 1 cut(s) 2268
BsmFI GGGAC 1 cut(s) 1504
BsmI GAATGC 2 cut(s) 1246, 1608
BsnI GGCC 9 cut(s) 998, 1026, 1328, 1371, 1473, 1851, 1896, 1917, 2207
Bso31I GGTCTC 2 cut(s) 1128, 1195
BsoBI CYCGRG 1 cut(s) 1191
Bsp1286I GDGCHC 2 cut(s) 2261, 2477
Bsp1407I TGTACA 2 cut(s) 1649, 2155
Bsp143I GATC 2 cut(s) 1046, 1734
Bsp19I CCATGG 1 cut(s) 1468
BspACI CCGC 3 cut(s) 995, 1027, 1397
BspANI GGCC 9 cut(s) 998, 1026, 1328, 1371, 1473, 1851, 1896, 1917, 2207
BspCNI CTCAG 1 cut(s) 2041
BspHI TCATGA 1 cut(s) 1612
BspPI GGATC 1 cut(s) 1729
BspTNI GGTCTC 2 cut(s) 1128, 1195
BsrDI GCAATG 3 cut(s) 1279, 1808, 2294
BsrGI TGTACA 2 cut(s) 1649, 2155
BsrI ACTGG 1 cut(s) 2347
BssECI CCNNGG 6 cut(s) 1021, 1468, 1744, 1897, 2164, 2199
BssMI GATC 2 cut(s) 1046, 1734
BssSI CACGAG 1 cut(s) 2071
BssT1I CCWWGG 3 cut(s) 1021, 1468, 2199
Bst2BI CACGAG 1 cut(s) 2071
Bst2UI CCWGG 2 cut(s) 1475, 2320
Bst4CI ACNGT 5 cut(s) 1301, 1392, 1880, 2278, 2427
Bst6I CTCTTC 4 cut(s) 1193, 1519, 1653, 1992
BstAPI GCANNNNNTGC 1 cut(s) 2291
BstAUI TGTACA 2 cut(s) 1649, 2155
BstBAI YACGTR 1 cut(s) 1387
BstC8I GCNNGC 2 cut(s) 2283, 2515
BstDEI CTNAG 6 cut(s) 1789, 1872, 2006, 2028, 2077, 2447
BstDSI CCRYGG 2 cut(s) 1468, 1897
BstENI CCTNNNNNAGG 1 cut(s) 2450
BstF5I GGATG 3 cut(s) 1342, 1517, 1754
BstKTI GATC 2 cut(s) 1049, 1737
BstMAI GTCTC 4 cut(s) 1128, 1195, 2268, 2366
BstMBI GATC 2 cut(s) 1046, 1734
BstMWI GCNNNNNNNGC 4 cut(s) 1241, 2204, 2291, 2510
BstNI CCWGG 2 cut(s) 1475, 2320
BstNSI RCATGY 1 cut(s) 1309
BstSCI CCNGG 2 cut(s) 1473, 2318
BstSFI CTRYAG 1 cut(s) 2478
BstSNI TACGTA 1 cut(s) 1387
BstV1I GCAGC 3 cut(s) 1840, 1939, 2345
BstV2I GAAGAC 1 cut(s) 2220
BstXI CCANNNNNNTGG 1 cut(s) 1925
Bsu36I CCTNAGG 1 cut(s) 2447
BsuI GTATCC 2 cut(s) 1922, 2162
BsuRI GGCC 9 cut(s) 998, 1026, 1328, 1371, 1473, 1851, 1896, 1917, 2207
BtgI CCRYGG 2 cut(s) 1468, 1897
BtrI CACGTC 2 cut(s) 2016, 2218
BtsCI GGATG 3 cut(s) 1342, 1517, 1754
BtsI GCAGTG 1 cut(s) 1020
Cac8I GCNNGC 2 cut(s) 2283, 2515
CciI TCATGA 1 cut(s) 1612
Csp6I GTAC 6 cut(s) 1388, 1650, 1876, 2156, 2308, 2431
CviQI GTAC 6 cut(s) 1388, 1650, 1876, 2156, 2308, 2431
DdeI CTNAG 6 cut(s) 1789, 1872, 2006, 2028, 2077, 2447
DpnI GATC 2 cut(s) 1048, 1736
DpnII GATC 2 cut(s) 1046, 1734
DraI TTTAAA 1 cut(s) 2527
EaeI YGGCCR 3 cut(s) 996, 1894, 2205
Eam1104I CTCTTC 4 cut(s) 1193, 1519, 1653, 1992
EarI CTCTTC 4 cut(s) 1193, 1519, 1653, 1992
Ecl136II GAGCTC 1 cut(s) 2475
Eco105I TACGTA 1 cut(s) 1387
Eco130I CCWWGG 3 cut(s) 1021, 1468, 2199
Eco24I GRGCYC 2 cut(s) 2261, 2477
Eco31I GGTCTC 2 cut(s) 1128, 1195
Eco53kI GAGCTC 1 cut(s) 2475
Eco57I CTGAAG 3 cut(s) 1799, 1841, 2348
Eco81I CCTNAGG 1 cut(s) 2447
Eco88I CYCGRG 1 cut(s) 1191
EcoICRI GAGCTC 1 cut(s) 2475
EcoNI CCTNNNNNAGG 1 cut(s) 2450
EcoRI GAATTC 2 cut(s) 1463, 2249
EcoRII CCWGG 2 cut(s) 1473, 2318
EcoT14I CCWWGG 3 cut(s) 1021, 1468, 2199
EcoT38I GRGCYC 2 cut(s) 2261, 2477
ErhI CCWWGG 3 cut(s) 1021, 1468, 2199
Esp3I CGTCTC 1 cut(s) 2268
FalI AAGNNNNNCTT 4 cut(s) 1768, 1800, 1839, 1871
FaqI GGGAC 1 cut(s) 1504
FauI CCCGC 1 cut(s) 1404
FauNDI CATATG 1 cut(s) 2519
FblI GTMKAC 1 cut(s) 1296
Fnu4HI GCNGC 5 cut(s) 996, 1027, 1829, 1953, 2334
FokI GGATG 3 cut(s) 1349, 1524, 1761
FriOI GRGCYC 2 cut(s) 2261, 2477
Fsp4HI GCNGC 5 cut(s) 996, 1027, 1829, 1953, 2334
FspBI CTAG 1 cut(s) 1022
GluI GCNGC 5 cut(s) 996, 1027, 1829, 1953, 2334
GsaI CCCAGC 1 cut(s) 1966
HaeIII GGCC 9 cut(s) 998, 1026, 1328, 1371, 1473, 1851, 1896, 1917, 2207
HapII CCGG 1 cut(s) 1706
HindIII AAGCTT 1 cut(s) 1782
HinfI GANTC 5 cut(s) 1076, 1210, 1285, 2177, 2389
HpaII CCGG 1 cut(s) 1706
HphI GGTGA 2 cut(s) 1205, 1607
Hpy166II GTNNAC 4 cut(s) 1018, 1297, 2158, 2274
Hpy188I TCNGA 8 cut(s) 1036, 1248, 1846, 1860, 2031, 2168, 2224, 2328
Hpy188III TCNNGA 3 cut(s) 1068, 1193, 1613
Hpy8I GTNNAC 4 cut(s) 1018, 1297, 2158, 2274
HpyAV CCTTC 9 cut(s) 1151, 1318, 1841, 1865, 1943, 2001, 2149, 2323, 2446
HpyCH4III ACNGT 5 cut(s) 1301, 1392, 1880, 2278, 2427
HpyCH4IV ACGT 5 cut(s) 1093, 1386, 2015, 2098, 2217
HpyF10VI GCNNNNNNNGC 4 cut(s) 1241, 2204, 2291, 2510
HpyF3I CTNAG 6 cut(s) 1789, 1872, 2006, 2028, 2077, 2447
HpySE526I ACGT 5 cut(s) 1093, 1386, 2015, 2098, 2217
Kzo9I GATC 2 cut(s) 1046, 1734
LmnI GCTCC 2 cut(s) 1804, 2040
Lsp1109I GCAGC 3 cut(s) 1840, 1939, 2345
LweI GCATC 2 cut(s) 1327, 1502
MaeI CTAG 1 cut(s) 1022
MaeII ACGT 5 cut(s) 1093, 1386, 2015, 2098, 2217
MalI GATC 2 cut(s) 1048, 1736
MboI GATC 2 cut(s) 1046, 1734
MhlI GDGCHC 2 cut(s) 2261, 2477
MmeI TCCRAC 2 cut(s) 1796, 1824
MroXI GAANNNNTTC 3 cut(s) 1107, 1547, 1784
MseI TTAA 6 cut(s) 1290, 1352, 2418, 2487, 2526, 2539
MspI CCGG 1 cut(s) 1706
MspR9I CCNGG 2 cut(s) 1475, 2320
Mva1269I GAATGC 2 cut(s) 1246, 1608
MvaI CCWGG 2 cut(s) 1475, 2320
MwoI GCNNNNNNNGC 4 cut(s) 1241, 2204, 2291, 2510
NcoI CCATGG 1 cut(s) 1468
NdeI CATATG 1 cut(s) 2519
NdeII GATC 2 cut(s) 1046, 1734
NmeAIII GCCGAG 2 cut(s) 1769, 2496
NspI RCATGY 1 cut(s) 1309
PagI TCATGA 1 cut(s) 1612
PciI ACATGT 1 cut(s) 1305
PctI GAATGC 2 cut(s) 1246, 1608
PdmI GAANNNNTTC 3 cut(s) 1107, 1547, 1784
PfeI GAWTC 5 cut(s) 1076, 1210, 1285, 2177, 2389
PflMI CCANNNNNTGG 2 cut(s) 1474, 1502
PkrI GCNGC 5 cut(s) 997, 1028, 1830, 1954, 2335
Ppu21I YACGTR 1 cut(s) 1387
PscI ACATGT 1 cut(s) 1305
Psp124BI GAGCTC 1 cut(s) 2477
Psp6I CCWGG 2 cut(s) 1473, 2318
PspFI CCCAGC 1 cut(s) 1962
PspGI CCWGG 2 cut(s) 1473, 2318
RsaI GTAC 6 cut(s) 1389, 1651, 1877, 2157, 2309, 2432
RsaNI GTAC 6 cut(s) 1388, 1650, 1876, 2156, 2308, 2431
SacI GAGCTC 1 cut(s) 2477
SaqAI TTAA 6 cut(s) 1290, 1352, 2418, 2487, 2526, 2539
SatI GCNGC 5 cut(s) 996, 1027, 1829, 1953, 2334
Sau3AI GATC 2 cut(s) 1046, 1734
ScrFI CCNGG 2 cut(s) 1475, 2320
SduI GDGCHC 2 cut(s) 2261, 2477
SfaNI GCATC 2 cut(s) 1327, 1502
SfcI CTRYAG 1 cut(s) 2478
SnaBI TACGTA 1 cut(s) 1387
SsiI CCGC 3 cut(s) 995, 1027, 1397
SspMI CTAG 1 cut(s) 1022
SstI GAGCTC 1 cut(s) 2477
StyD4I CCNGG 2 cut(s) 1473, 2318
StyI CCWWGG 3 cut(s) 1021, 1468, 2199
TaaI ACNGT 5 cut(s) 1301, 1392, 1880, 2278, 2427
TaiI ACGT 5 cut(s) 1096, 1389, 2018, 2101, 2220
TaqI TCGA 6 cut(s) 1069, 1322, 1407, 1455, 2145, 2492
TatI WGTACW 4 cut(s) 1649, 1875, 2155, 2307
TauI GCSGC 2 cut(s) 998, 1029
TfiI GAWTC 5 cut(s) 1076, 1210, 1285, 2177, 2389
Tru1I TTAA 6 cut(s) 1290, 1352, 2418, 2487, 2526, 2539
Tru9I TTAA 6 cut(s) 1290, 1352, 2418, 2487, 2526, 2539
TseI GCWGC 3 cut(s) 1828, 1952, 2333
Van91I CCANNNNNTGG 2 cut(s) 1474, 1502
XagI CCTNNNNNAGG 1 cut(s) 2450
XapI RAATTY 5 cut(s) 1402, 1463, 1547, 2249, 2528
XceI RCATGY 1 cut(s) 1309
XmaJI CCTAGG 1 cut(s) 1021
XmiI GTMKAC 1 cut(s) 1296
XmnI GAANNNNTTC 3 cut(s) 1107, 1547, 1784
XspI CTAG 1 cut(s) 1022
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.