Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004729.1

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

27528 .. 31772

Gene Structure 4245 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

atgatcagcggaaaggacatttacgaggtccttgcgagccttgtgccgctttacgtagccatgatcttggcctatggctcggtccggtggtggaagatcttcaccccggaccagtgctccggcatcaaccgattcgtggcggtttttgccgttcctttgctttcttttcacttcatttcttccaatgatccgtacgtcatgaactaccggttcatagcggcggactcgttgcagaaagtggtgattctggtggctctattcctctggcagatcttctccaagcgcggcaacctcgagtggatgatctcgctcttctccctctcgactctccccaacactctcgtcatgggcattcctctgttgaaggccatgtacggcgacttttcggccactctcatggttcaaatcgtggtgctgcagagcgtcatctggtacactctcatgctcttcatgttcgagtacagaggagccaaactcttgatctcagagcagttcccggaaaccgctgggtccatcacctcgtttcgggtggactccgacgtcgtttcgcttaacggacgagagcctttggagacggatgccgagattggagaggatgggaagttacacgtggtggtgagaagatcggtggcgtcgtcgatggtgtcgtctatcaagtcgcacgggttcaactccttgaattccggcatgacgcctcgagcttcgaacctaaccggcgttgagatttattccgttcagtcgtctcgtgaacagacgccgagggcatccagcttcaaccagactgacttctacaccatgttcaattccagagaggcgcagagccctaaacacggttgcaccaacagcttcaagggcgggtttggcgatgtttactcgttccagtcatcgaaaggcgtagctccgaggacttcaaattttcatgaggatatgaagagaggggcaaggagcatgagctgtgagctgttcaatgccgggacggtgccttcgtacccgcctccaaatcccatgttttcgaggtctaccagtggcggacaggagaagaaggaaagcggcggcgccggtgccggtgccgttgtcggtggtggtgcaatgtctaataaggagcttcatatgtttgtttggagctcgagtgcttcatcggtttccgaagggagtcagaaacatgcagttaacagggctgcctctactgattttgggggcattgattcttctagggctgctcaacatgatcatccaattgctggttcaagagggatgcaaaaattgattcagaatatgagttctggaaggaaaatgagtggagatgtcgagctcgaaatagaagaaggaaccaagtttccagcaagtgcaacctcatatagtagccgccataagaagatggacatggaagacggaggtgtgacaaagaagcaacagatgcctcctgcaagtgtcatgactaggcttatactgatcatggtgtggagaaagctcattagaaatcccaacagctacgccagtctccttggtttattcatggctttgcagccaaagatcatagcttgtggaaaagcagtagcaacattcggaatggctgttaggttcttgataggcccagcagtgattgctgcatgctccgtagctgttgacctggcgggtttcgtccgacccggcccccccaaggtcgcctcacctcgtccggccgctccgtggcgtccgcccgcccagacgctgcccccaggccgagatcgaagcaaccccagaatttgtagtccttcagcgtctcatctagtcctccactgcggtgatgacattagccacgttcttcctttggccgagctagcagcccctcaaacccagtcaagaaaaaagtcatcctgttgcctttttttttttgcctcagtcaagaaaagccaacaattggctgggcaaggtttcaccggtggaaggccaaaattccttgtggctggtcaccacatcagttttctgagctggagcccgggcaaagcaagtccacacatagtcaagaaatgtcaaggtcgaaaagtcaaggcgtcgactagtcaagaaactgttcactgccactggacatgggtttccacccgttctgtttcttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0001666 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0005886 GO:0006810 GO:0006950 GO:0008150 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009743 GO:0009746 GO:0009749 GO:0009914 GO:0009921 GO:0009925 GO:0009926 GO:0009958 GO:0009966 GO:0010033 GO:0010252 GO:0010315 GO:0010329 GO:0010646 GO:0010817 GO:0010928 GO:0012505 GO:0015562 GO:0016020 GO:0016323 GO:0022857 GO:0023051 GO:0032991 GO:0034284 GO:0036293 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0045178 GO:0048583 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0060918 GO:0065007 GO:0065008 GO:0070482 GO:0071944 GO:0080161 GO:0098590 GO:0098796 GO:0098797 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mem_trans

Protein Analysis

698

Amino Acids

75.89

Weight (kDa)

9.65

Isoelectric Point (pI)

48.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mem_trans	PF03547	10 - 508	1.2e-69	Membrane transport protein
Mem_trans	PF03547	502 - 546	2.4e-06	Membrane transport protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	539
AatII	GACGTC	1 cut(s)	543
AccB1I	GGYRCC	4 cut(s)	979, 1055, 1061, 1067
AccB7I	CCANNNNNTGG	2 cut(s)	1241, 1900
AccBSI	CCGCTC	1 cut(s)	1685
AccI	GTMKAC	2 cut(s)	1019, 2036
AccII	CGCG	1 cut(s)	285
AclWI	GGATC	1 cut(s)	182
AcoI	YGGCCR	3 cut(s)	387, 1680, 1812
AcsI	RAATTY	4 cut(s)	679, 913, 1743, 1934
AcuI	CTGAAG	1 cut(s)	1740
AcvI	CACGTG	1 cut(s)	610
AcyI	GRCGYC	7 cut(s)	540, 632, 692, 755, 1056, 1693, 2033
AdeI	CACNNNGTG	1 cut(s)	613
AfaI	GTAC	5 cut(s)	194, 374, 434, 461, 989
AfiI	CCNNNNNNNGG	8 cut(s)	136, 525, 830, 1241, 1660, 1689, 1900, 1926
AflIII	ACRYGT	1 cut(s)	607
AgeI	ACCGGT	2 cut(s)	207, 1919
AhlI	ACTAGT	1 cut(s)	2039
AjnI	CCWGG	2 cut(s)	1629, 1717
AjuI	GAANNNNNNNTTGG	2 cut(s)	1228, 1260
AleI	CACNNNNGTG	1 cut(s)	1782
AloI	GAACNNNNNNTCC	2 cut(s)	1321, 1353
Alw21I	GWGCWC	3 cut(s)	119, 1127, 1314
Alw26I	GTCTC	4 cut(s)	566, 747, 1505, 1767
AlwI	GGATC	1 cut(s)	182
AlwNI	CAGNNNCTG	1 cut(s)	1711
Ama87I	CYCGRG	4 cut(s)	293, 696, 1126, 1978
AoxI	GGCC	9 cut(s)	69, 366, 387, 1591, 1651, 1680, 1720, 1812, 1928
ApeKI	GCWGC	7 cut(s)	415, 1178, 1217, 1525, 1607, 1711, 1823
ApoI	RAATTY	4 cut(s)	679, 913, 1743, 1934
ArsI	GACNNNNNNTTYG	2 cut(s)	967, 999
AsiGI	ACCGGT	2 cut(s)	207, 1919
Asp700I	GAANNNNTTC	2 cut(s)	98, 2052
AspLEI	GCGC	3 cut(s)	285, 817, 1058
AspS9I	GGNCC	6 cut(s)	28, 82, 109, 510, 1592, 1652
AsuC2I	CCSGG	6 cut(s)	107, 497, 973, 1650, 1979, 1980
AsuHPI	GGTGA	8 cut(s)	94, 253, 508, 628, 1662, 1796, 1909, 1943
AsuII	TTCGAA	1 cut(s)	704
AsuNHI	GCTAGC	1 cut(s)	1819
AvaI	CYCGRG	4 cut(s)	293, 696, 1126, 1978
AvaII	GGWCC	4 cut(s)	28, 82, 109, 510
BanI	GGYRCC	4 cut(s)	979, 1055, 1061, 1067
BanII	GRGCYC	4 cut(s)	824, 1127, 1314, 1979
BarI	GAAGNNNNNNTAC	2 cut(s)	356, 388
BauI	CACGAG	1 cut(s)	744
BbrPI	CACGTG	1 cut(s)	610
BbsI	GAAGAC	1 cut(s)	1395
Bbv12I	GWGCWC	3 cut(s)	119, 1127, 1314
BbvI	GCAGC	7 cut(s)	402, 1165, 1204, 1537, 1594, 1698, 1835
BccI	CCATC	4 cut(s)	521, 590, 634, 1372
BceAI	ACGGC	3 cut(s)	134, 391, 1055
BcgI	CGANNNNNNTGC	4 cut(s)	14, 25, 48, 59
BciT130I	CCWGG	2 cut(s)	1631, 1719
BclI	TGATCA	3 cut(s)	3, 1228, 1452
BcnI	CCSGG	6 cut(s)	107, 497, 973, 1650, 1979, 1980
BcoDI	GTCTC	4 cut(s)	566, 747, 1505, 1767
BcuI	ACTAGT	1 cut(s)	2039
BfaI	CTAG	5 cut(s)	1212, 1440, 1769, 1820, 2040
BfmI	CTRYAG	1 cut(s)	416
BfoI	RGCGCY	1 cut(s)	1059
BglII	AGATCT	2 cut(s)	96, 270
Bme1390I	CCNGG	8 cut(s)	107, 497, 973, 1631, 1650, 1719, 1979, 1980
Bme18I	GGWCC	4 cut(s)	28, 82, 109, 510
BmeT110I	CYCGRG	4 cut(s)	293, 696, 1126, 1978
BmgT120I	GGNCC	6 cut(s)	28, 82, 109, 510, 1592, 1652
BmiI	GGNNCC	9 cut(s)	469, 511, 981, 1057, 1063, 1069, 1330, 1654, 1976
BmrFI	CCNGG	8 cut(s)	107, 497, 973, 1631, 1650, 1719, 1979, 1980
BmrI	ACTGGG	1 cut(s)	1831
BmsI	GCATC	5 cut(s)	132, 568, 773, 1245, 1407
BmtI	GCTAGC	1 cut(s)	1823
BmuI	ACTGGG	1 cut(s)	1831
BpiI	GAAGAC	1 cut(s)	1395
BplI	GAGNNNNNCTC	2 cut(s)	459, 491
BpmI	CTGGAG	1 cut(s)	1993
Bpu14I	TTCGAA	1 cut(s)	704
BpuMI	CCSGG	6 cut(s)	107, 497, 973, 1650, 1979, 1980
BsaAI	YACGTR	2 cut(s)	55, 610
BsaHI	GRCGYC	7 cut(s)	540, 632, 692, 755, 1056, 1693, 2033
BsaJI	CCNNGG	8 cut(s)	105, 758, 902, 1504, 1659, 1688, 1717, 1978
BsaWI	WCCGGW	3 cut(s)	84, 207, 1919
BsaXI	ACNNNNNCTCC	4 cut(s)	101, 131, 1114, 1144
Bsc4I	CCNNNNNNNGG	8 cut(s)	136, 525, 830, 1241, 1660, 1689, 1900, 1926
Bse118I	RCCGGY	5 cut(s)	207, 713, 1058, 1064, 1919
Bse1I	ACTGG	6 cut(s)	112, 880, 1023, 1497, 1837, 2069
Bse3DI	GCAATG	1 cut(s)	1095
BseBI	CCWGG	2 cut(s)	1631, 1719
BseDI	CCNNGG	8 cut(s)	105, 758, 902, 1504, 1659, 1688, 1717, 1978
BseGI	GGATG	7 cut(s)	306, 583, 601, 764, 1231, 1260, 1853
BseLI	CCNNNNNNNGG	8 cut(s)	136, 525, 830, 1241, 1660, 1689, 1900, 1926
BseMI	GCAATG	1 cut(s)	1095
BseMII	CTCAG	3 cut(s)	498, 1893, 1958
BseNI	ACTGG	6 cut(s)	112, 880, 1023, 1497, 1837, 2069
BseRI	GAGGAG	1 cut(s)	480
BseX3I	CGGCCG	1 cut(s)	1680
BseXI	GCAGC	7 cut(s)	402, 1165, 1204, 1537, 1594, 1698, 1835
BseYI	CCCAGC	3 cut(s)	506, 1594, 1904
Bsh1236I	CGCG	1 cut(s)	285
Bsh1285I	CGRYCG	1 cut(s)	1683
BshFI	GGCC	9 cut(s)	71, 368, 389, 1593, 1653, 1682, 1722, 1814, 1930
BshNI	GGYRCC	4 cut(s)	979, 1055, 1061, 1067
BshTI	ACCGGT	2 cut(s)	207, 1919
BsiEI	CGRYCG	1 cut(s)	1683
BsiHKAI	GWGCWC	3 cut(s)	119, 1127, 1314
BsiHKCI	CYCGRG	4 cut(s)	293, 696, 1126, 1978
BsiWI	CGTACG	1 cut(s)	192
BslFI	GGGAC	1 cut(s)	988
BslI	CCNNNNNNNGG	8 cut(s)	136, 525, 830, 1241, 1660, 1689, 1900, 1926
BsmAI	GTCTC	4 cut(s)	566, 747, 1505, 1767
BsmBI	CGTCTC	3 cut(s)	566, 747, 1767
BsmFI	GGGAC	1 cut(s)	988
BsmI	GAATGC	1 cut(s)	351
BsnI	GGCC	9 cut(s)	71, 368, 389, 1593, 1653, 1682, 1722, 1814, 1930
BsoBI	CYCGRG	4 cut(s)	293, 696, 1126, 1978
Bsp119I	TTCGAA	1 cut(s)	704
Bsp1286I	GDGCHC	5 cut(s)	119, 824, 1127, 1314, 1979
BspANI	GGCC	9 cut(s)	71, 368, 389, 1593, 1653, 1682, 1722, 1814, 1930
BspCNI	CTCAG	3 cut(s)	497, 1892, 1959
BspFNI	CGCG	1 cut(s)	285
BspHI	TCATGA	3 cut(s)	198, 919, 1434
BspLI	GGNNCC	9 cut(s)	469, 511, 981, 1057, 1063, 1069, 1330, 1654, 1976
BspMAI	CTGCAG	1 cut(s)	420
BspOI	GCTAGC	1 cut(s)	1823
BspPI	GGATC	1 cut(s)	182
BspQI	GCTCTTC	2 cut(s)	317, 452
BspT104I	TTCGAA	1 cut(s)	704
BspT107I	GGYRCC	4 cut(s)	979, 1055, 1061, 1067
BsrBI	CCGCTC	1 cut(s)	1685
BsrDI	GCAATG	1 cut(s)	1095
BsrFI	RCCGGY	5 cut(s)	207, 713, 1058, 1064, 1919
BsrI	ACTGG	6 cut(s)	112, 880, 1023, 1497, 1837, 2069
BssAI	RCCGGY	5 cut(s)	207, 713, 1058, 1064, 1919
BssECI	CCNNGG	8 cut(s)	105, 758, 902, 1504, 1659, 1688, 1717, 1978
BssNI	GRCGYC	7 cut(s)	540, 632, 692, 755, 1056, 1693, 2033
BssSI	CACGAG	1 cut(s)	744
BssT1I	CCWWGG	2 cut(s)	1504, 1659
Bst2BI	CACGAG	1 cut(s)	744
Bst2UI	CCWGG	2 cut(s)	1631, 1719
Bst4CI	ACNGT	3 cut(s)	833, 979, 2053
Bst6I	CTCTTC	3 cut(s)	317, 452, 926
BstACI	GRCGYC	7 cut(s)	540, 632, 692, 755, 1056, 1693, 2033
BstAPI	GCANNNNNTGC	2 cut(s)	1417, 1604
BstBAI	YACGTR	2 cut(s)	55, 610
BstBI	TTCGAA	1 cut(s)	704
BstC8I	GCNNGC	4 cut(s)	37, 1612, 1701, 1821
BstDEI	CTNAG	3 cut(s)	484, 1879, 1967
BstDSI	CCRYGG	1 cut(s)	1688
BstEII	GGTNACC	1 cut(s)	1949
BstF5I	GGATG	7 cut(s)	306, 583, 601, 764, 1231, 1260, 1853
BstFNI	CGCG	1 cut(s)	285
BstH2I	RGCGCY	1 cut(s)	1059
BstHHI	GCGC	3 cut(s)	285, 817, 1058
BstMAI	GTCTC	4 cut(s)	566, 747, 1505, 1767
BstMCI	CGRYCG	1 cut(s)	1683
BstMWI	GCNNNNNNNGC	7 cut(s)	146, 843, 852, 861, 1417, 1604, 1820
BstNI	CCWGG	2 cut(s)	1631, 1719
BstNSI	RCATGY	2 cut(s)	1166, 1614
BstPI	GGTNACC	1 cut(s)	1949
BstSCI	CCNGG	8 cut(s)	105, 495, 971, 1629, 1648, 1717, 1977, 1978
BstSFI	CTRYAG	1 cut(s)	416
BstSNI	TACGTA	1 cut(s)	55
BstUI	CGCG	1 cut(s)	285
BstV1I	GCAGC	7 cut(s)	402, 1165, 1204, 1537, 1594, 1698, 1835
BstV2I	GAAGAC	1 cut(s)	1395
BstX2I	RGATCY	2 cut(s)	96, 270
BstXI	CCANNNNNNTGG	2 cut(s)	67, 397
BstYI	RGATCY	2 cut(s)	96, 270
BstZI	CGGCCG	1 cut(s)	1680
BsuRI	GGCC	9 cut(s)	71, 368, 389, 1593, 1653, 1682, 1722, 1814, 1930
BtgI	CCRYGG	1 cut(s)	1688
BtgZI	GCGATG	1 cut(s)	879
BtsCI	GGATG	7 cut(s)	306, 583, 601, 764, 1231, 1260, 1853
BtsI	GCAGTG	3 cut(s)	1605, 1777, 2056
BtsIMutI	CAGTG	6 cut(s)	119, 1030, 1605, 1777, 2056, 2062
Cac8I	GCNNGC	4 cut(s)	37, 1612, 1701, 1821
CaiI	CAGNNNCTG	1 cut(s)	1711
CciI	TCATGA	3 cut(s)	198, 919, 1434
CfoI	GCGC	3 cut(s)	285, 817, 1058
Cfr10I	RCCGGY	5 cut(s)	207, 713, 1058, 1064, 1919
Cfr13I	GGNCC	6 cut(s)	28, 82, 109, 510, 1592, 1652
Cfr9I	CCCGGG	1 cut(s)	1978
CpoI	CGGWCCG	1 cut(s)	82
CseI	GACGC	8 cut(s)	412, 621, 700, 763, 1682, 1717, 1749, 2022
Csp6I	GTAC	5 cut(s)	193, 373, 433, 460, 988
CspAI	ACCGGT	2 cut(s)	207, 1919
CspI	CGGWCCG	1 cut(s)	82
CviQI	GTAC	5 cut(s)	193, 373, 433, 460, 988
DdeI	CTNAG	3 cut(s)	484, 1879, 1967
DinI	GGCGCC	1 cut(s)	1057
DraIII	CACNNNGTG	1 cut(s)	613
DrdI	GACNNNNNNGTC	1 cut(s)	539
DseDI	GACNNNNNNGTC	1 cut(s)	539
EaeI	YGGCCR	3 cut(s)	387, 1680, 1812
EagI	CGGCCG	1 cut(s)	1680
Eam1104I	CTCTTC	3 cut(s)	317, 452, 926
EarI	CTCTTC	3 cut(s)	317, 452, 926
EciI	GGCGGA	3 cut(s)	236, 1044, 1686
Ecl136II	GAGCTC	2 cut(s)	1125, 1312
EclXI	CGGCCG	1 cut(s)	1680
Eco105I	TACGTA	1 cut(s)	55
Eco130I	CCWWGG	2 cut(s)	1504, 1659
Eco24I	GRGCYC	4 cut(s)	824, 1127, 1314, 1979
Eco47I	GGWCC	4 cut(s)	28, 82, 109, 510
Eco52I	CGGCCG	1 cut(s)	1680
Eco53kI	GAGCTC	2 cut(s)	1125, 1312
Eco57I	CTGAAG	1 cut(s)	1740
Eco72I	CACGTG	1 cut(s)	610
Eco88I	CYCGRG	4 cut(s)	293, 696, 1126, 1978
Eco91I	GGTNACC	1 cut(s)	1949
EcoICRI	GAGCTC	2 cut(s)	1125, 1312
EcoO109I	RGGNCCY	1 cut(s)	28
EcoO65I	GGTNACC	1 cut(s)	1949
EcoRI	GAATTC	1 cut(s)	679
EcoRII	CCWGG	2 cut(s)	1629, 1717
EcoT14I	CCWWGG	2 cut(s)	1504, 1659
EcoT38I	GRGCYC	4 cut(s)	824, 1127, 1314, 1979
EgeI	GGCGCC	1 cut(s)	1057
EheI	GGCGCC	1 cut(s)	1057
ErhI	CCWWGG	2 cut(s)	1504, 1659
Esp3I	CGTCTC	3 cut(s)	566, 747, 1767
FaqI	GGGAC	1 cut(s)	988
FauI	CCCGC	4 cut(s)	848, 999, 1627, 1708
FauNDI	CATATG	1 cut(s)	1110
FbaI	TGATCA	3 cut(s)	3, 1228, 1452
FblI	GTMKAC	2 cut(s)	1019, 2036
FokI	GGATG	7 cut(s)	313, 590, 608, 751, 1218, 1267, 1840
FriOI	GRGCYC	4 cut(s)	824, 1127, 1314, 1979
FspBI	CTAG	5 cut(s)	1212, 1440, 1769, 1820, 2040
GlaI	GCGC	3 cut(s)	284, 816, 1057
GsaI	CCCAGC	3 cut(s)	510, 1598, 1908
GsuI	CTGGAG	1 cut(s)	1993
HaeII	RGCGCY	1 cut(s)	1059
HaeIII	GGCC	9 cut(s)	71, 368, 389, 1593, 1653, 1682, 1722, 1814, 1930
HgaI	GACGC	8 cut(s)	412, 621, 700, 763, 1682, 1717, 1749, 2022
HhaI	GCGC	3 cut(s)	285, 817, 1058
Hin1I	GRCGYC	7 cut(s)	540, 632, 692, 755, 1056, 1693, 2033
Hin6I	GCGC	3 cut(s)	283, 815, 1056
HinP1I	GCGC	3 cut(s)	283, 815, 1056
HincII	GTYRAC	3 cut(s)	1171, 1627, 2037
HindII	GTYRAC	3 cut(s)	1171, 1627, 2037
HinfI	GANTC	8 cut(s)	132, 224, 244, 325, 533, 1153, 1205, 1267
HpaI	GTTAAC	1 cut(s)	1171
HphI	GGTGA	8 cut(s)	94, 253, 508, 628, 1662, 1796, 1909, 1943
Hpy188I	TCNGA	9 cut(s)	487, 538, 903, 1147, 1158, 1272, 1568, 1646, 1968
Hpy99I	CGWCG	5 cut(s)	542, 545, 637, 640, 2038
HpyAV	CCTTC	8 cut(s)	358, 993, 1036, 1142, 1281, 1319, 1764, 1920
HpyCH4III	ACNGT	3 cut(s)	833, 979, 2053
HpyCH4IV	ACGT	5 cut(s)	54, 195, 540, 609, 1800
HpyF10VI	GCNNNNNNNGC	7 cut(s)	146, 843, 852, 861, 1417, 1604, 1820
HpyF3I	CTNAG	3 cut(s)	484, 1879, 1967
HpySE526I	ACGT	5 cut(s)	54, 195, 540, 609, 1800
Hsp92I	GRCGYC	7 cut(s)	540, 632, 692, 755, 1056, 1693, 2033
HspAI	GCGC	3 cut(s)	283, 815, 1056
KasI	GGCGCC	1 cut(s)	1055
Ksp22I	TGATCA	3 cut(s)	3, 1228, 1452
KspAI	GTTAAC	1 cut(s)	1171
LguI	GCTCTTC	2 cut(s)	317, 452
LmnI	GCTCC	9 cut(s)	122, 467, 904, 945, 1102, 1122, 1619, 1690, 1974
Lsp1109I	GCAGC	7 cut(s)	402, 1165, 1204, 1537, 1594, 1698, 1835
LweI	GCATC	5 cut(s)	132, 568, 773, 1245, 1407
MaeI	CTAG	5 cut(s)	1212, 1440, 1769, 1820, 2040
MaeII	ACGT	5 cut(s)	54, 195, 540, 609, 1800
MaeIII	GTNAC	3 cut(s)	603, 1399, 1949
MbiI	CCGCTC	1 cut(s)	1685
MfeI	CAATTG	2 cut(s)	1236, 1898
MflI	RGATCY	2 cut(s)	96, 270
MhlI	GDGCHC	5 cut(s)	119, 824, 1127, 1314, 1979
MluCI	AATT	8 cut(s)	679, 802, 913, 1236, 1262, 1743, 1898, 1934
Mly113I	GGCGCC	1 cut(s)	1056
MlyI	GAGTC	4 cut(s)	218, 319, 527, 1162
MmeI	TCCRAC	2 cut(s)	561, 1669
MroXI	GAANNNNTTC	2 cut(s)	98, 2052
MseI	TTAA	2 cut(s)	552, 1170
MslI	CAYNNNNRTG	3 cut(s)	395, 440, 1782
MspA1I	CMGCKG	2 cut(s)	9, 506
MspR9I	CCNGG	8 cut(s)	107, 497, 973, 1631, 1650, 1719, 1979, 1980
MunI	CAATTG	2 cut(s)	1236, 1898
Mva1269I	GAATGC	1 cut(s)	351
MvaI	CCWGG	2 cut(s)	1631, 1719
MvnI	CGCG	1 cut(s)	285
MwoI	GCNNNNNNNGC	7 cut(s)	146, 843, 852, 861, 1417, 1604, 1820
NarI	GGCGCC	1 cut(s)	1056
NciI	CCSGG	6 cut(s)	107, 497, 973, 1650, 1979, 1980
NdeI	CATATG	1 cut(s)	1110
NheI	GCTAGC	1 cut(s)	1819
NlaIV	GGNNCC	9 cut(s)	469, 511, 981, 1057, 1063, 1069, 1330, 1654, 1976
NmeAIII	GCCGAG	4 cut(s)	607, 783, 1748, 1840
NmuCI	GTSAC	2 cut(s)	1399, 1949
NspI	RCATGY	2 cut(s)	1166, 1614
NspV	TTCGAA	1 cut(s)	704
OliI	CACNNNNGTG	1 cut(s)	1782
PaeI	GCATGC	1 cut(s)	1614
PaeR7I	CTCGAG	3 cut(s)	293, 696, 1126
PagI	TCATGA	3 cut(s)	198, 919, 1434
PciSI	GCTCTTC	2 cut(s)	317, 452
PcsI	WCGNNNNNNNCGW	3 cut(s)	632, 644, 983
PctI	GAATGC	1 cut(s)	351
PdmI	GAANNNNTTC	2 cut(s)	98, 2052
PfeI	GAWTC	4 cut(s)	132, 244, 1205, 1267
Pfl23II	CGTACG	1 cut(s)	192
PflMI	CCANNNNNTGG	2 cut(s)	1241, 1900
PfoI	TCCNGGA	1 cut(s)	495
PinAI	ACCGGT	2 cut(s)	207, 1919
PleI	GAGTC	4 cut(s)	218, 319, 527, 1161
PluTI	GGCGCC	1 cut(s)	1059
PmaCI	CACGTG	1 cut(s)	610
PmlI	CACGTG	1 cut(s)	610
PpsI	GAGTC	4 cut(s)	218, 319, 527, 1161
Ppu21I	YACGTR	2 cut(s)	55, 610
PpuMI	RGGWCCY	1 cut(s)	28
Psp124BI	GAGCTC	2 cut(s)	1127, 1314
Psp5II	RGGWCCY	1 cut(s)	28
Psp6I	CCWGG	2 cut(s)	1629, 1717
PspCI	CACGTG	1 cut(s)	610
PspEI	GGTNACC	1 cut(s)	1949
PspFI	CCCAGC	3 cut(s)	506, 1594, 1904
PspGI	CCWGG	2 cut(s)	1629, 1717
PspLI	CGTACG	1 cut(s)	192
PspN4I	GGNNCC	9 cut(s)	469, 511, 981, 1057, 1063, 1069, 1330, 1654, 1976
PspPI	GGNCC	6 cut(s)	28, 82, 109, 510, 1592, 1652
PspPPI	RGGWCCY	1 cut(s)	28
PspXI	VCTCGAGB	3 cut(s)	293, 696, 1126
PstI	CTGCAG	1 cut(s)	420
PstNI	CAGNNNCTG	1 cut(s)	1711
PsuI	RGATCY	2 cut(s)	96, 270
RsaI	GTAC	5 cut(s)	194, 374, 434, 461, 989
RsaNI	GTAC	5 cut(s)	193, 373, 433, 460, 988
RseI	CAYNNNNRTG	3 cut(s)	395, 440, 1782
Rsr2I	CGGWCCG	1 cut(s)	82
RsrII	CGGWCCG	1 cut(s)	82
SacI	GAGCTC	2 cut(s)	1127, 1314
SalI	GTCGAC	1 cut(s)	2035
SapI	GCTCTTC	2 cut(s)	317, 452
SaqAI	TTAA	2 cut(s)	552, 1170
Sau96I	GGNCC	6 cut(s)	28, 82, 109, 510, 1592, 1652
SchI	GAGTC	4 cut(s)	218, 319, 527, 1162
ScrFI	CCNGG	8 cut(s)	107, 497, 973, 1631, 1650, 1719, 1979, 1980
SduI	GDGCHC	5 cut(s)	119, 824, 1127, 1314, 1979
SfaNI	GCATC	5 cut(s)	132, 568, 773, 1245, 1407
SfcI	CTRYAG	1 cut(s)	416
SfoI	GGCGCC	1 cut(s)	1057
Sfr274I	CTCGAG	3 cut(s)	293, 696, 1126
SfuI	TTCGAA	1 cut(s)	704
SgrAI	CRCCGGYG	2 cut(s)	1058, 1919
SinI	GGWCC	4 cut(s)	28, 82, 109, 510
SlaI	CTCGAG	3 cut(s)	293, 696, 1126
SmaI	CCCGGG	1 cut(s)	1980
SmiMI	CAYNNNNRTG	3 cut(s)	395, 440, 1782
SmlI	CTYRAG	3 cut(s)	293, 696, 1126
SmoI	CTYRAG	3 cut(s)	293, 696, 1126
SnaBI	TACGTA	1 cut(s)	55
SpeI	ACTAGT	1 cut(s)	2039
SphI	GCATGC	1 cut(s)	1614
SrfI	GCCCGGGC	1 cut(s)	1980
Sse9I	AATT	8 cut(s)	679, 802, 913, 1236, 1262, 1743, 1898, 1934
SspDI	GGCGCC	1 cut(s)	1055
SspMI	CTAG	5 cut(s)	1212, 1440, 1769, 1820, 2040
SstI	GAGCTC	2 cut(s)	1127, 1314
StyD4I	CCNGG	8 cut(s)	105, 495, 971, 1629, 1648, 1717, 1977, 1978
StyI	CCWWGG	2 cut(s)	1504, 1659
TaaI	ACNGT	3 cut(s)	833, 979, 2053
TaiI	ACGT	5 cut(s)	57, 198, 543, 612, 1803
TaqII	GACCGA	1 cut(s)	70
TasI	AATT	8 cut(s)	679, 802, 913, 1236, 1262, 1743, 1898, 1934
TatI	WGTACW	1 cut(s)	459
TauI	GCSGC	7 cut(s)	49, 221, 288, 1053, 1056, 1368, 1685
TfiI	GAWTC	4 cut(s)	132, 244, 1205, 1267
Tru1I	TTAA	2 cut(s)	552, 1170
Tru9I	TTAA	2 cut(s)	552, 1170
TscAI	CASTG	6 cut(s)	119, 1030, 1605, 1784, 2063, 2069
TseFI	GTSAC	2 cut(s)	1399, 1949
TseI	GCWGC	7 cut(s)	415, 1178, 1217, 1525, 1607, 1711, 1823
Tsp45I	GTSAC	2 cut(s)	1399, 1949
TspDTI	ATGAA	9 cut(s)	163, 202, 215, 439, 908, 944, 1097, 1125, 1504
TspGWI	ACGGA	7 cut(s)	180, 570, 590, 721, 1407, 1606, 1677
TspMI	CCCGGG	1 cut(s)	1978
TspRI	CASTG	6 cut(s)	119, 1030, 1605, 1784, 2063, 2069
Van91I	CCANNNNNTGG	2 cut(s)	1241, 1900
VpaK11BI	GGWCC	4 cut(s)	28, 82, 109, 510
XapI	RAATTY	4 cut(s)	679, 913, 1743, 1934
XceI	RCATGY	2 cut(s)	1166, 1614
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1901
XhoI	CTCGAG	3 cut(s)	293, 696, 1126
XmaI	CCCGGG	1 cut(s)	1978
XmiI	GTMKAC	2 cut(s)	1019, 2036
XmnI	GAANNNNTTC	2 cut(s)	98, 2052
XspI	CTAG	5 cut(s)	1212, 1440, 1769, 1820, 2040
ZraI	GACGTC	1 cut(s)	541

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.