Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004984.1

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

11300 .. 12186

Gene Structure 887 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 576 bp

atggcaagcaatgaagaacagaaattccaagttagaaaactagagctctcggacaaaagcaagggatttatagaactactgcagcagctaaccacttgcgattctgtatctgacaaagactttgaagatcgattcatggagcttcagtcccgtgctgaagaccatcaggtgtttgttatagaagatgatcgttctgggaagattgttgcaactggtagtgtcttcattgaaaggaagtttataaggaactgtggtaaagttgggcacattgaagacgttgtggttgattccaatgctcgcggacattcattgggaagccaaaagagaaagaaagagcacctgaacacaagtgtccgtcatgtaaacgccgtccaagttcggcgaggaggaagaagaagaagaagaagaggaaggggcttcttccaacgccgtggaggaataaaaatgagagctgagaagcctctggttctgcctgattcgaccggcaaagtgcgccgtcaaccggtgaagaatcaacgtcctcggagccatggtgaagaagatgcctattcctctcaaaaccaaaatcagaattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004343 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006040 GO:0006044 GO:0006047 GO:0006048 GO:0006139 GO:0006725 GO:0006793 GO:0006807 GO:0008080 GO:0008150 GO:0008152 GO:0009058 GO:0009225 GO:0009226 GO:0009987 GO:0012505 GO:0016407 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0018130 GO:0019438 GO:0034641 GO:0034654 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046349 GO:0046483 GO:0055086 GO:0071704 GO:1901071 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00520 map00520

Pfam Domains

Protein Families

Acetyltransf_1

Protein Analysis

191

Amino Acids

22.01

Weight (kDa)

10.29

Isoelectric Point (pI)

69.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acetyltransf_1	PF00583	39 - 107	2.4e-07	Acetyltransferase (GNAT) family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	242
AccII	CGCG	1 cut(s)	300
AciI	CCGC	1 cut(s)	300
AcsI	RAATTY	1 cut(s)	23
AcuI	CTGAAG	2 cut(s)	128, 177
AfiI	CCNNNNNNNGG	1 cut(s)	502
AgeI	ACCGGT	1 cut(s)	502
AgsI	TTSAA	3 cut(s)	125, 230, 272
AloI	GAACNNNNNNTCC	2 cut(s)	9, 41
AluBI	AGCT	4 cut(s)	46, 88, 142, 452
AluI	AGCT	4 cut(s)	46, 88, 142, 452
Alw21I	GWGCWC	2 cut(s)	48, 339
ApeKI	GCWGC	2 cut(s)	82, 85
ApoI	RAATTY	1 cut(s)	23
ArsI	GACNNNNNNTTYG	2 cut(s)	104, 136
AsiGI	ACCGGT	1 cut(s)	502
AspLEI	GCGC	1 cut(s)	495
AsuHPI	GGTGA	2 cut(s)	517, 545
BaeGI	GKGCMC	1 cut(s)	267
BanII	GRGCYC	1 cut(s)	48
BbsI	GAAGAC	3 cut(s)	165, 214, 279
Bbv12I	GWGCWC	2 cut(s)	48, 339
BbvI	GCAGC	2 cut(s)	94, 97
BccI	CCATC	1 cut(s)	171
BceAI	ACGGC	3 cut(s)	353, 414, 480
BfaI	CTAG	1 cut(s)	41
BfmI	CTRYAG	1 cut(s)	80
BisI	GCNGC	2 cut(s)	83, 86
BlsI	GCNGC	2 cut(s)	84, 87
BmiI	GGNNCC	1 cut(s)	527
BmsI	GCATC	1 cut(s)	532
BpiI	GAAGAC	3 cut(s)	165, 214, 279
Bsa29I	ATCGAT	1 cut(s)	130
BsaJI	CCNNGG	3 cut(s)	430, 521, 529
BsaWI	WCCGGW	1 cut(s)	502
BsaXI	ACNNNNNCTCC	4 cut(s)	131, 161, 517, 547
Bsc4I	CCNNNNNNNGG	1 cut(s)	502
Bse118I	RCCGGY	2 cut(s)	482, 502
Bse1I	ACTGG	1 cut(s)	217
Bse3DI	GCAATG	1 cut(s)	16
BseCI	ATCGAT	1 cut(s)	130
BseDI	CCNNGG	3 cut(s)	430, 521, 529
BseLI	CCNNNNNNNGG	1 cut(s)	502
BseMI	GCAATG	1 cut(s)	16
BseMII	CTCAG	1 cut(s)	444
BseNI	ACTGG	1 cut(s)	217
BseRI	GAGGAG	1 cut(s)	399
BseSI	GKGCMC	1 cut(s)	267
BseXI	GCAGC	2 cut(s)	94, 97
Bsh1236I	CGCG	1 cut(s)	300
Bsh1285I	CGRYCG	1 cut(s)	483
BshTI	ACCGGT	1 cut(s)	502
BshVI	ATCGAT	1 cut(s)	130
BsiEI	CGRYCG	1 cut(s)	483
BsiHKAI	GWGCWC	2 cut(s)	48, 339
BsiSI	CCGG	2 cut(s)	483, 503
BslFI	GGGAC	1 cut(s)	133
BslI	CCNNNNNNNGG	1 cut(s)	502
BsmFI	GGGAC	1 cut(s)	133
Bsp1286I	GDGCHC	3 cut(s)	48, 267, 339
Bsp143I	GATC	2 cut(s)	127, 187
Bsp19I	CCATGG	1 cut(s)	529
BspACI	CCGC	1 cut(s)	300
BspCNI	CTCAG	1 cut(s)	445
BspDI	ATCGAT	1 cut(s)	130
BspFNI	CGCG	1 cut(s)	300
BspLI	GGNNCC	1 cut(s)	527
BspMAI	CTGCAG	1 cut(s)	84
BsrDI	GCAATG	1 cut(s)	16
BsrFI	RCCGGY	2 cut(s)	482, 502
BsrI	ACTGG	1 cut(s)	217
BssAI	RCCGGY	2 cut(s)	482, 502
BssECI	CCNNGG	3 cut(s)	430, 521, 529
BssMI	GATC	2 cut(s)	127, 187
BssT1I	CCWWGG	1 cut(s)	529
Bst4CI	ACNGT	1 cut(s)	251
Bst6I	CTCTTC	1 cut(s)	400
BstC8I	GCNNGC	2 cut(s)	7, 298
BstDEI	CTNAG	1 cut(s)	453
BstDSI	CCRYGG	2 cut(s)	430, 529
BstFNI	CGCG	1 cut(s)	300
BstHHI	GCGC	1 cut(s)	495
BstKTI	GATC	2 cut(s)	130, 190
BstMBI	GATC	2 cut(s)	127, 187
BstMCI	CGRYCG	1 cut(s)	483
BstMWI	GCNNNNNNNGC	1 cut(s)	492
BstSFI	CTRYAG	1 cut(s)	80
BstSLI	GKGCMC	1 cut(s)	267
BstUI	CGCG	1 cut(s)	300
BstV1I	GCAGC	2 cut(s)	94, 97
BstV2I	GAAGAC	3 cut(s)	165, 214, 279
BstXI	CCANNNNNNTGG	1 cut(s)	431
Bsu15I	ATCGAT	1 cut(s)	130
BsuTUI	ATCGAT	1 cut(s)	130
BtgI	CCRYGG	2 cut(s)	430, 529
Cac8I	GCNNGC	2 cut(s)	7, 298
CfoI	GCGC	1 cut(s)	495
Cfr10I	RCCGGY	2 cut(s)	482, 502
ClaI	ATCGAT	1 cut(s)	130
CspAI	ACCGGT	1 cut(s)	502
CviAII	CATG	3 cut(s)	136, 359, 530
CviJI	RGCY	8 cut(s)	46, 88, 142, 318, 417, 452, 460, 528
CviKI_1	RGCY	8 cut(s)	46, 88, 142, 318, 417, 452, 460, 528
DdeI	CTNAG	1 cut(s)	453
DpnI	GATC	2 cut(s)	129, 189
DpnII	GATC	2 cut(s)	127, 187
Eam1104I	CTCTTC	1 cut(s)	400
EarI	CTCTTC	1 cut(s)	400
Ecl136II	GAGCTC	1 cut(s)	46
Eco130I	CCWWGG	1 cut(s)	529
Eco24I	GRGCYC	1 cut(s)	48
Eco53kI	GAGCTC	1 cut(s)	46
Eco57I	CTGAAG	2 cut(s)	128, 177
EcoICRI	GAGCTC	1 cut(s)	46
EcoT14I	CCWWGG	1 cut(s)	529
EcoT38I	GRGCYC	1 cut(s)	48
ErhI	CCWWGG	1 cut(s)	529
FaeI	CATG	3 cut(s)	139, 362, 533
FaiI	YATR	6 cut(s)	71, 137, 179, 242, 360, 531
FaqI	GGGAC	1 cut(s)	133
FatI	CATG	3 cut(s)	135, 358, 529
Fnu4HI	GCNGC	2 cut(s)	83, 86
FriOI	GRGCYC	1 cut(s)	48
Fsp4HI	GCNGC	2 cut(s)	83, 86
FspBI	CTAG	1 cut(s)	41
GlaI	GCGC	1 cut(s)	494
GluI	GCNGC	2 cut(s)	83, 86
HapII	CCGG	2 cut(s)	483, 503
HhaI	GCGC	1 cut(s)	495
Hin1II	CATG	3 cut(s)	139, 362, 533
Hin6I	GCGC	1 cut(s)	493
HinP1I	GCGC	1 cut(s)	493
HincII	GTYRAC	1 cut(s)	500
HindII	GTYRAC	1 cut(s)	500
HinfI	GANTC	5 cut(s)	101, 132, 287, 476, 511
HpaII	CCGG	2 cut(s)	483, 503
HphI	GGTGA	2 cut(s)	517, 545
Hpy166II	GTNNAC	2 cut(s)	364, 500
Hpy188I	TCNGA	4 cut(s)	52, 112, 525, 570
Hpy8I	GTNNAC	2 cut(s)	364, 500
HpyAV	CCTTC	1 cut(s)	405
HpyCH4III	ACNGT	1 cut(s)	251
HpyCH4IV	ACGT	2 cut(s)	276, 517
HpyCH4V	TGCA	2 cut(s)	82, 209
HpyF10VI	GCNNNNNNNGC	1 cut(s)	492
HpyF3I	CTNAG	1 cut(s)	453
HpySE526I	ACGT	2 cut(s)	276, 517
Hsp92II	CATG	3 cut(s)	139, 362, 533
HspAI	GCGC	1 cut(s)	493
Kzo9I	GATC	2 cut(s)	127, 187
LmnI	GCTCC	2 cut(s)	139, 525
LpnPI	CCDG	8 cut(s)	152, 180, 198, 353, 449, 486, 496, 516
Lsp1109I	GCAGC	2 cut(s)	94, 97
LweI	GCATC	1 cut(s)	532
MaeI	CTAG	1 cut(s)	41
MaeII	ACGT	2 cut(s)	276, 517
MalI	GATC	2 cut(s)	129, 189
MboI	GATC	2 cut(s)	127, 187
MhlI	GDGCHC	3 cut(s)	48, 267, 339
MluCI	AATT	2 cut(s)	23, 571
MmeI	TCCRAC	1 cut(s)	448
MnlI	CCTC	7 cut(s)	377, 380, 401, 428, 471, 531, 562
MspI	CCGG	2 cut(s)	483, 503
MvnI	CGCG	1 cut(s)	300
MwoI	GCNNNNNNNGC	1 cut(s)	492
NcoI	CCATGG	1 cut(s)	529
NdeII	GATC	2 cut(s)	127, 187
NlaIII	CATG	3 cut(s)	139, 362, 533
NlaIV	GGNNCC	1 cut(s)	527
PfeI	GAWTC	5 cut(s)	101, 132, 287, 476, 511
PinAI	ACCGGT	1 cut(s)	502
PkrI	GCNGC	2 cut(s)	84, 87
PsiI	TTATAA	1 cut(s)	242
Psp124BI	GAGCTC	1 cut(s)	48
PspN4I	GGNNCC	1 cut(s)	527
PstI	CTGCAG	1 cut(s)	84
SacI	GAGCTC	1 cut(s)	48
SatI	GCNGC	2 cut(s)	83, 86
Sau3AI	GATC	2 cut(s)	127, 187
SduI	GDGCHC	3 cut(s)	48, 267, 339
SetI	ASST	8 cut(s)	48, 90, 144, 171, 279, 342, 454, 520
SfaNI	GCATC	1 cut(s)	532
SfcI	CTRYAG	1 cut(s)	80
Sse9I	AATT	2 cut(s)	23, 571
SsiI	CCGC	1 cut(s)	300
SspMI	CTAG	1 cut(s)	41
SstI	GAGCTC	1 cut(s)	48
StyI	CCWWGG	1 cut(s)	529
TaaI	ACNGT	1 cut(s)	251
TaiI	ACGT	2 cut(s)	279, 520
TaqI	TCGA	2 cut(s)	130, 479
TasI	AATT	2 cut(s)	23, 571
TfiI	GAWTC	5 cut(s)	101, 132, 287, 476, 511
TseI	GCWGC	2 cut(s)	82, 85
TspDTI	ATGAA	4 cut(s)	27, 124, 214, 297
TspGWI	ACGGA	1 cut(s)	344
XapI	RAATTY	1 cut(s)	23
XspI	CTAG	1 cut(s)	41

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.