Rmu_sc0005034.1_g000003

No description available

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005034.1
N/A
Physical Location & Seq
Forward (+)
38578 .. 38844
267 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 267 bp
atgaatgaagaagaccccagaaggctgtgggtctcactcgaagaaagatttggcaatgtctgtgactccctgcttcttgacctagaagtgagatggcatagcctccgcttatgtgatttcaagtcagttcttgactacaactcggaagcacttcacattaaatccttaatggaattatgtggtaaagatatcacaaatgcgatgttgattgagaagactctctcgaccttccctgtctcagcattgatggttgctaagaactattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

88

Amino Acids

10.21

Weight (kDa)

5.04

Isoelectric Point (pI)

55.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 106
AgsI TTSAA 1 cut(s) 121
AjuI GAANNNNNNNTTGG 2 cut(s) 33, 65
Alw26I GTCTC 2 cut(s) 37, 241
Asp700I GAANNNNTTC 1 cut(s) 150
BbsI GAAGAC 2 cut(s) 18, 221
BccI CCATC 2 cut(s) 87, 241
BcoDI GTCTC 2 cut(s) 37, 241
BfaI CTAG 1 cut(s) 83
BpiI GAAGAC 2 cut(s) 18, 221
BsaI GGTCTC 1 cut(s) 37
Bse3DI GCAATG 1 cut(s) 61
BseMI GCAATG 1 cut(s) 61
BseMII CTCAG 1 cut(s) 252
BsmAI GTCTC 2 cut(s) 37, 241
Bso31I GGTCTC 1 cut(s) 37
BspACI CCGC 1 cut(s) 106
BspCNI CTCAG 1 cut(s) 251
BspTNI GGTCTC 1 cut(s) 37
BsrDI GCAATG 1 cut(s) 61
BstDEI CTNAG 2 cut(s) 238, 255
BstMAI GTCTC 2 cut(s) 37, 241
BstV2I GAAGAC 2 cut(s) 18, 221
BtgZI GCGATG 1 cut(s) 215
CviJI RGCY 2 cut(s) 25, 102
CviKI_1 RGCY 2 cut(s) 25, 102
DdeI CTNAG 2 cut(s) 238, 255
Eco31I GGTCTC 1 cut(s) 37
Eco32I GATATC 1 cut(s) 190
EcoRV GATATC 1 cut(s) 190
FaiI YATR 3 cut(s) 99, 112, 178
FspBI CTAG 1 cut(s) 83
HinfI GANTC 2 cut(s) 65, 217
Hpy188I TCNGA 1 cut(s) 145
Hpy188III TCNNGA 3 cut(s) 77, 131, 223
HpyAV CCTTC 2 cut(s) 15, 238
HpyF3I CTNAG 2 cut(s) 238, 255
LpnPI CCDG 3 cut(s) 31, 83, 246
MaeI CTAG 1 cut(s) 83
MaeIII GTNAC 1 cut(s) 62
MboII GAAGA 4 cut(s) 20, 23, 53, 226
MluCI AATT 1 cut(s) 173
MlyI GAGTC 2 cut(s) 59, 211
MnlI CCTC 1 cut(s) 113
MroXI GAANNNNTTC 1 cut(s) 150
MseI TTAA 2 cut(s) 159, 167
NmuCI GTSAC 1 cut(s) 62
PdmI GAANNNNTTC 1 cut(s) 150
PleI GAGTC 2 cut(s) 59, 211
PpsI GAGTC 2 cut(s) 59, 211
SaqAI TTAA 2 cut(s) 159, 167
SchI GAGTC 2 cut(s) 59, 211
SetI ASST 2 cut(s) 84, 230
Sse9I AATT 1 cut(s) 173
SsiI CCGC 1 cut(s) 106
SspMI CTAG 1 cut(s) 83
TaqI TCGA 2 cut(s) 39, 224
TasI AATT 1 cut(s) 173
Tru1I TTAA 2 cut(s) 159, 167
Tru9I TTAA 2 cut(s) 159, 167
TseFI GTSAC 1 cut(s) 62
Tsp45I GTSAC 1 cut(s) 62
TspDTI ATGAA 2 cut(s) 17, 21
XmnI GAANNNNTTC 1 cut(s) 150
XspI CTAG 1 cut(s) 83
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.