Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005137.1

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

134105 .. 143896

Gene Structure 9792 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2004 bp

atggtgcaggtatcgggccggttcgggttacccaaacttagagatattggaaaccgagaccgacccgtggccaaggttctcggttcggtttcagcccggaccgtcaaaagtagcagaaaagcccgacccgaatggtcgggttctcgggtttccggatcggtccctcggctcatctcatatggctttcgacgcttgacggagcctcttactatcgtgttcacgcttcccgcatcatttgtacaaccaactggtcaaagtagtggtgtgagcaatgggtctagaaggagagaaagaggcaggccagtcaattcccgctttttagcagacgacggtccaagggagaagttcactaccaccaacctcaacgacgctggtcgtagagtatctatcaaagaaagtttcgttaaagaggaacatgccaagggattcgccctaggacaacctcatcaatccaaaaaaaaaaaagagaaaaaagaagaagaagaagaaacatggaatgttggatattcacaacgccggatttcgacgacttccgaactacatgtgtcatcaaagacaagtgatgatccgaattttgttgggatcacaaactcagattatgagttagatgggaatgatgatgaagtcttgtttcagaagaatgtggatggtgatgcaaacgtagtgcctaagtatgaagaaatggggtttgatgaaaatatctcagatgatgcaaaagaatatgatgaattcagtagtgtgaattcaagtgatagtgaaggtgaagatagggggggcctttcagagtcaaggggaagaggagatttcatgctcaagagtacaagtccaccttcatgcatggcatatggaaaatggagtagagggcatttaaaattcgggaatagggactttggaatggagatagggtaccaaatgtgttatagggctaaggcaaaagctgagaaaatggcagagggaagttgcagacccatcataggattggatgggtgtcacttaaagtttgttcataaggggcaactactttcagcagtagatattgatggcaacaatgggatgtattccatagcttgggccattgttgggcatgaaaccagagattcatgggcctggggatggacacactacactgaacttgagttgaagcagaggttgtgggcagtggccagatcaaccaccatggcccaatacactaagaatatggatgagatgaataagatatctctcaaagcttgggattggtgtaacaacaggcatgcaaggcattgggcattacaatccaatgattggaggtttgaagtacaaggcagaggtgttgcatatgaatcaggagtgattactcaacactttgtggcattggatctgaggaaatgcacatgcagaagatgggatctgtgtggactgccatgtggctggtctccatatgattttgtctctaaatggtacacacgtaagaagtatattgaggcatatgaggttatgattcatcccatagctggtggtgaggaatgggatcataaagatagtcgcgtctctgatataaaaaccctccgcagtctcagagttgagaaaaccctctcggattcttcttcatcttttgccgcgctctccgtcgctcaatcttccaaactcaagttctattctcgactcagtttctccggcgatctcctccgatcatcaacagatatggatacgtcaaacccgtctgtttttgtgaatgcagagctgctgcggttgtatgttggaaggcaggttcgggcgttgattcaggttgtgcaactggatgctggatctgtcattggcaaatctactgatgaaattcagttaattgtaaagggcaccccaccctttcctcttacaaaatttgttgaggtcataggtattgctgacggcgataaatctatccaagctagcatatggaacaactttggtgacacaattgacacgcatgcttacaatcagctttgcttgcttgcaaatggagaatttaagcacttgttcatctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03030 ko03420 ko03430 ko03440 ko03460 map03030 map03420 map03430 map03440 map03460

Pfam Domains

Protein Families

Rep_fac-A_3

Protein Analysis

667

Amino Acids

75.09

Weight (kDa)

8.58

Isoelectric Point (pI)

40.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rep_fac-A_3	PF08661	562 - 663	1e-18	Replication factor A protein 3

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1738
Acc65I	GGTACC	1 cut(s)	906
AccB1I	GGYRCC	2 cut(s)	906, 1835
AccB7I	CCANNNNNTGG	2 cut(s)	1068, 1284
AccII	CGCG	2 cut(s)	1527, 1601
AccIII	TCCGGA	1 cut(s)	152
AciI	CCGC	5 cut(s)	228, 313, 1549, 1599, 1729
AclWI	GGATC	7 cut(s)	163, 560, 590, 1365, 1395, 1518, 1795
AcoI	YGGCCR	2 cut(s)	69, 1161
AcsI	RAATTY	7 cut(s)	571, 728, 742, 872, 1815, 1859, 1982
AdeI	CACNNNGTG	1 cut(s)	1348
AfaI	GTAC	5 cut(s)	240, 820, 908, 1299, 1442
AfiI	CCNNNNNNNGG	7 cut(s)	67, 974, 1068, 1080, 1113, 1284, 1493
AflIII	ACRYGT	2 cut(s)	541, 1445
AgsI	TTSAA	3 cut(s)	747, 1141, 1295
AjnI	CCWGG	1 cut(s)	1106
AjuI	GAANNNNNNNTTGG	2 cut(s)	1616, 1648
AloI	GAACNNNNNNTCC	2 cut(s)	1734, 1766
AluBI	AGCT	7 cut(s)	938, 1067, 1229, 1493, 1723, 1907, 1960
AluI	AGCT	7 cut(s)	938, 1067, 1229, 1493, 1723, 1907, 1960
Alw26I	GTCTC	5 cut(s)	51, 1419, 1435, 1534, 1559
AlwI	GGATC	7 cut(s)	163, 560, 590, 1365, 1395, 1518, 1795
Ama87I	CYCGRG	1 cut(s)	144
Aor13HI	TCCGGA	1 cut(s)	152
AoxI	GGCC	8 cut(s)	16, 69, 299, 775, 1071, 1104, 1161, 1179
ApeKI	GCWGC	2 cut(s)	1723, 1726
ApoI	RAATTY	7 cut(s)	571, 728, 742, 872, 1815, 1859, 1982
Asp718I	GGTACC	1 cut(s)	906
AspA2I	CCTAGG	1 cut(s)	433
AspLEI	GCGC	1 cut(s)	1603
AspS9I	GGNCC	8 cut(s)	16, 99, 160, 332, 775, 1071, 1104, 1180
AsuC2I	CCSGG	1 cut(s)	97
AsuHPI	GGTGA	4 cut(s)	662, 773, 1511, 1940
AsuNHI	GCTAGC	1 cut(s)	1907
AvaI	CYCGRG	1 cut(s)	144
AvaII	GGWCC	3 cut(s)	99, 160, 332
AvrII	CCTAGG	1 cut(s)	433
BaeGI	GKGCMC	1 cut(s)	1838
BaeI	ACNNNNGTAYC	2 cut(s)	1432, 1465
BalI	TGGCCA	2 cut(s)	71, 1163
BanI	GGYRCC	2 cut(s)	906, 1835
BbvI	GCAGC	2 cut(s)	1710, 1713
BccI	CCATC	7 cut(s)	602, 641, 977, 977, 1034, 1107, 1377
BceAI	ACGGC	1 cut(s)	1903
BciT130I	CCWGG	1 cut(s)	1108
BciVI	GTATCC	1 cut(s)	1681
BcnI	CCSGG	1 cut(s)	97
BcoDI	GTCTC	5 cut(s)	51, 1419, 1435, 1534, 1559
BfaI	CTAG	3 cut(s)	279, 434, 1908
BfuAI	ACCTGC	1 cut(s)	1738
BfuI	GTATCC	1 cut(s)	1681
BisI	GCNGC	3 cut(s)	1599, 1724, 1727
BlnI	CCTAGG	1 cut(s)	433
BlsI	GCNGC	3 cut(s)	1600, 1725, 1728
Bme1390I	CCNGG	2 cut(s)	97, 1108
Bme18I	GGWCC	3 cut(s)	99, 160, 332
BmeT110I	CYCGRG	1 cut(s)	144
BmgT120I	GGNCC	8 cut(s)	16, 99, 160, 332, 775, 1071, 1104, 1180
BmiI	GGNNCC	5 cut(s)	162, 201, 776, 908, 1837
BmrFI	CCNGG	2 cut(s)	97, 1108
BmsI	GCATC	4 cut(s)	239, 643, 700, 1771
BmtI	GCTAGC	1 cut(s)	1911
BoxI	GACNNNNGTC	2 cut(s)	330, 372
Bpu10I	CCTNAGC	1 cut(s)	927
BpuEI	CTTGAG	3 cut(s)	797, 1154, 1613
BpuMI	CCSGG	1 cut(s)	97
BsaAI	YACGTR	1 cut(s)	1448
BsaI	GGTCTC	2 cut(s)	51, 1419
BsaJI	CCNNGG	8 cut(s)	66, 72, 164, 335, 420, 433, 1107, 1176
BsaWI	WCCGGW	1 cut(s)	152
BsaXI	ACNNNNNCTCC	2 cut(s)	890, 920
Bsc4I	CCNNNNNNNGG	7 cut(s)	67, 974, 1068, 1080, 1113, 1284, 1493
Bse118I	RCCGGY	1 cut(s)	18
Bse1I	ACTGG	3 cut(s)	253, 302, 1782
Bse3DI	GCAATG	1 cut(s)	277
BseAI	TCCGGA	1 cut(s)	152
BseBI	CCWGG	1 cut(s)	1108
BseDI	CCNNGG	8 cut(s)	66, 72, 164, 335, 420, 433, 1107, 1176
BseGI	GGATG	7 cut(s)	652, 988, 1059, 1118, 1207, 1483, 1786
BseLI	CCNNNNNNNGG	7 cut(s)	67, 974, 1068, 1080, 1113, 1284, 1493
BseMI	GCAATG	1 cut(s)	277
BseMII	CTCAG	6 cut(s)	606, 717, 930, 1352, 1570, 1660
BseNI	ACTGG	3 cut(s)	253, 302, 1782
BseRI	GAGGAG	2 cut(s)	813, 1655
BseSI	GKGCMC	1 cut(s)	1838
BseXI	GCAGC	2 cut(s)	1710, 1713
BsgI	GTGCAG	1 cut(s)	26
Bsh1236I	CGCG	2 cut(s)	1527, 1601
BshFI	GGCC	8 cut(s)	18, 71, 301, 777, 1073, 1106, 1163, 1181
BshNI	GGYRCC	2 cut(s)	906, 1835
BsiHKCI	CYCGRG	1 cut(s)	144
BsiSI	CCGG	5 cut(s)	19, 97, 153, 517, 1656
BslFI	GGGAC	2 cut(s)	146, 899
BslI	CCNNNNNNNGG	7 cut(s)	67, 974, 1068, 1080, 1113, 1284, 1493
BsmAI	GTCTC	5 cut(s)	51, 1419, 1435, 1534, 1559
BsmBI	CGTCTC	1 cut(s)	1534
BsmFI	GGGAC	2 cut(s)	146, 899
BsmI	GAATGC	1 cut(s)	1720
BsnI	GGCC	8 cut(s)	18, 71, 301, 777, 1073, 1106, 1163, 1181
Bso31I	GGTCTC	2 cut(s)	51, 1419
BsoBI	CYCGRG	1 cut(s)	144
Bsp1286I	GDGCHC	1 cut(s)	1838
Bsp13I	TCCGGA	1 cut(s)	152
Bsp1407I	TGTACA	1 cut(s)	238
Bsp19I	CCATGG	1 cut(s)	1176
BspACI	CCGC	5 cut(s)	228, 313, 1549, 1599, 1729
BspANI	GGCC	8 cut(s)	18, 71, 301, 777, 1073, 1106, 1163, 1181
BspCNI	CTCAG	6 cut(s)	605, 716, 931, 1353, 1569, 1659
BspEI	TCCGGA	1 cut(s)	152
BspFNI	CGCG	2 cut(s)	1527, 1601
BspLI	GGNNCC	5 cut(s)	162, 201, 776, 908, 1837
BspMI	ACCTGC	1 cut(s)	1738
BspOI	GCTAGC	1 cut(s)	1911
BspPI	GGATC	7 cut(s)	163, 560, 590, 1365, 1395, 1518, 1795
BspT107I	GGYRCC	2 cut(s)	906, 1835
BspTNI	GGTCTC	2 cut(s)	51, 1419
BsrDI	GCAATG	1 cut(s)	277
BsrFI	RCCGGY	1 cut(s)	18
BsrGI	TGTACA	1 cut(s)	238
BsrI	ACTGG	3 cut(s)	253, 302, 1782
BssAI	RCCGGY	1 cut(s)	18
BssECI	CCNNGG	8 cut(s)	66, 72, 164, 335, 420, 433, 1107, 1176
BssT1I	CCWWGG	5 cut(s)	72, 335, 420, 433, 1176
Bst2UI	CCWGG	1 cut(s)	1108
Bst4CI	ACNGT	2 cut(s)	103, 332
Bst6I	CTCTTC	1 cut(s)	790
BstAUI	TGTACA	1 cut(s)	238
BstBAI	YACGTR	1 cut(s)	1448
BstC8I	GCNNGC	6 cut(s)	299, 1254, 1909, 1947, 1967, 1971
BstDSI	CCRYGG	2 cut(s)	66, 1176
BstEII	GGTNACC	1 cut(s)	27
BstF5I	GGATG	7 cut(s)	652, 988, 1059, 1118, 1207, 1483, 1786
BstFNI	CGCG	2 cut(s)	1527, 1601
BstHHI	GCGC	1 cut(s)	1603
BstMAI	GTCTC	5 cut(s)	51, 1419, 1435, 1534, 1559
BstMWI	GCNNNNNNNGC	3 cut(s)	189, 1258, 1966
BstNI	CCWGG	1 cut(s)	1108
BstNSI	RCATGY	5 cut(s)	419, 545, 1256, 1377, 1949
BstPAI	GACNNNNGTC	2 cut(s)	330, 372
BstPI	GGTNACC	1 cut(s)	27
BstSCI	CCNGG	2 cut(s)	95, 1106
BstSLI	GKGCMC	1 cut(s)	1838
BstUI	CGCG	2 cut(s)	1527, 1601
BstV1I	GCAGC	2 cut(s)	1710, 1713
BstX2I	RGATCY	3 cut(s)	1357, 1387, 1787
BstXI	CCANNNNNNTGG	1 cut(s)	1410
BstYI	RGATCY	3 cut(s)	1357, 1387, 1787
BsuI	GTATCC	1 cut(s)	1681
BsuRI	GGCC	8 cut(s)	18, 71, 301, 777, 1073, 1106, 1163, 1181
BtgI	CCRYGG	2 cut(s)	66, 1176
BtsCI	GGATG	7 cut(s)	652, 988, 1059, 1118, 1207, 1483, 1786
BtsI	GCAGTG	1 cut(s)	1164
BtsIMutI	CAGTG	2 cut(s)	1125, 1164
BveI	ACCTGC	1 cut(s)	1738
Cac8I	GCNNGC	6 cut(s)	299, 1254, 1909, 1947, 1967, 1971
CfoI	GCGC	1 cut(s)	1603
Cfr10I	RCCGGY	1 cut(s)	18
Cfr13I	GGNCC	8 cut(s)	16, 99, 160, 332, 775, 1071, 1104, 1180
CpoI	CGGWCCG	1 cut(s)	99
CseI	GACGC	3 cut(s)	198, 377, 1516
Csp6I	GTAC	5 cut(s)	239, 819, 907, 1298, 1441
CspI	CGGWCCG	1 cut(s)	99
CviQI	GTAC	5 cut(s)	239, 819, 907, 1298, 1441
DraI	TTTAAA	1 cut(s)	870
DraIII	CACNNNGTG	1 cut(s)	1348
EaeI	YGGCCR	2 cut(s)	69, 1161
Eam1104I	CTCTTC	1 cut(s)	790
EarI	CTCTTC	1 cut(s)	790
Eco130I	CCWWGG	5 cut(s)	72, 335, 420, 433, 1176
Eco31I	GGTCTC	2 cut(s)	51, 1419
Eco32I	GATATC	1 cut(s)	1218
Eco47I	GGWCC	3 cut(s)	99, 160, 332
Eco88I	CYCGRG	1 cut(s)	144
Eco91I	GGTNACC	1 cut(s)	27
EcoO109I	RGGNCCY	1 cut(s)	775
EcoO65I	GGTNACC	1 cut(s)	27
EcoRI	GAATTC	2 cut(s)	728, 742
EcoRII	CCWGG	1 cut(s)	1106
EcoRV	GATATC	1 cut(s)	1218
EcoT14I	CCWWGG	5 cut(s)	72, 335, 420, 433, 1176
EcoT22I	ATGCAT	1 cut(s)	839
ErhI	CCWWGG	5 cut(s)	72, 335, 420, 433, 1176
Esp3I	CGTCTC	1 cut(s)	1534
FalI	AAGNNNNNCTT	2 cut(s)	814, 846
FaqI	GGGAC	2 cut(s)	146, 899
FauI	CCCGC	2 cut(s)	235, 320
FauNDI	CATATG	6 cut(s)	178, 844, 1318, 1420, 1468, 1913
Fnu4HI	GCNGC	3 cut(s)	1599, 1724, 1727
FokI	GGATG	7 cut(s)	659, 995, 1066, 1125, 1214, 1470, 1793
Fsp4HI	GCNGC	3 cut(s)	1599, 1724, 1727
FspBI	CTAG	3 cut(s)	279, 434, 1908
GlaI	GCGC	1 cut(s)	1602
GluI	GCNGC	3 cut(s)	1599, 1724, 1727
HaeIII	GGCC	8 cut(s)	18, 71, 301, 777, 1073, 1106, 1163, 1181
HapII	CCGG	5 cut(s)	19, 97, 153, 517, 1656
HgaI	GACGC	3 cut(s)	198, 377, 1516
HhaI	GCGC	1 cut(s)	1603
Hin6I	GCGC	1 cut(s)	1601
HinP1I	GCGC	1 cut(s)	1601
HindIII	AAGCTT	1 cut(s)	1227
HinfI	GANTC	8 cut(s)	426, 785, 1097, 1322, 1480, 1580, 1644, 1762
HpaII	CCGG	5 cut(s)	19, 97, 153, 517, 1656
HphI	GGTGA	4 cut(s)	662, 773, 1511, 1940
Hpy166II	GTNNAC	5 cut(s)	219, 348, 827, 1397, 1443
Hpy188III	TCNNGA	6 cut(s)	153, 279, 814, 877, 1326, 1641
Hpy8I	GTNNAC	5 cut(s)	219, 348, 827, 1397, 1443
Hpy99I	CGWCG	5 cut(s)	192, 332, 371, 529, 1613
HpyAV	CCTTC	4 cut(s)	276, 752, 840, 1737
HpyCH4III	ACNGT	2 cut(s)	103, 332
HpyCH4IV	ACGT	3 cut(s)	660, 1447, 1691
HpyF10VI	GCNNNNNNNGC	3 cut(s)	189, 1258, 1966
HpySE526I	ACGT	3 cut(s)	660, 1447, 1691
HspAI	GCGC	1 cut(s)	1601
Kpn2I	TCCGGA	1 cut(s)	152
KpnI	GGTACC	1 cut(s)	910
LmnI	GCTCC	1 cut(s)	199
Lsp1109I	GCAGC	2 cut(s)	1710, 1713
LweI	GCATC	4 cut(s)	239, 643, 700, 1771
MaeI	CTAG	3 cut(s)	279, 434, 1908
MaeII	ACGT	3 cut(s)	660, 1447, 1691
MaeIII	GTNAC	4 cut(s)	27, 989, 1241, 1928
MfeI	CAATTG	1 cut(s)	1935
MflI	RGATCY	3 cut(s)	1357, 1387, 1787
MhlI	GDGCHC	1 cut(s)	1838
MlsI	TGGCCA	2 cut(s)	71, 1163
MluNI	TGGCCA	2 cut(s)	71, 1163
MlyI	GAGTC	2 cut(s)	794, 1638
MmeI	TCCRAC	2 cut(s)	481, 1720
Mox20I	TGGCCA	2 cut(s)	71, 1163
Mph1103I	ATGCAT	1 cut(s)	839
MroI	TCCGGA	1 cut(s)	152
MscI	TGGCCA	2 cut(s)	71, 1163
MseI	TTAA	5 cut(s)	405, 869, 995, 1823, 1986
MslI	CAYNNNNRTG	1 cut(s)	832
Msp20I	TGGCCA	2 cut(s)	71, 1163
MspI	CCGG	5 cut(s)	19, 97, 153, 517, 1656
MspR9I	CCNGG	2 cut(s)	97, 1108
MunI	CAATTG	1 cut(s)	1935
Mva1269I	GAATGC	1 cut(s)	1720
MvaI	CCWGG	1 cut(s)	1108
MvnI	CGCG	2 cut(s)	1527, 1601
MwoI	GCNNNNNNNGC	3 cut(s)	189, 1258, 1966
NciI	CCSGG	1 cut(s)	97
NcoI	CCATGG	1 cut(s)	1176
NdeI	CATATG	6 cut(s)	178, 844, 1318, 1420, 1468, 1913
NheI	GCTAGC	1 cut(s)	1907
NlaIV	GGNNCC	5 cut(s)	162, 201, 776, 908, 1837
NmeAIII	GCCGAG	1 cut(s)	145
NmuCI	GTSAC	2 cut(s)	989, 1928
NsiI	ATGCAT	1 cut(s)	839
NspI	RCATGY	5 cut(s)	419, 545, 1256, 1377, 1949
PaeI	GCATGC	2 cut(s)	1256, 1949
PciI	ACATGT	1 cut(s)	541
PcsI	WCGNNNNNNNCGW	1 cut(s)	1697
PctI	GAATGC	1 cut(s)	1720
PfeI	GAWTC	6 cut(s)	426, 1097, 1322, 1480, 1580, 1762
PflMI	CCANNNNNTGG	2 cut(s)	1068, 1284
PkrI	GCNGC	3 cut(s)	1600, 1725, 1728
PleI	GAGTC	2 cut(s)	793, 1638
PpsI	GAGTC	2 cut(s)	793, 1638
Ppu21I	YACGTR	1 cut(s)	1448
PscI	ACATGT	1 cut(s)	541
PshAI	GACNNNNGTC	2 cut(s)	330, 372
Psp6I	CCWGG	1 cut(s)	1106
PspEI	GGTNACC	1 cut(s)	27
PspGI	CCWGG	1 cut(s)	1106
PspN4I	GGNNCC	5 cut(s)	162, 201, 776, 908, 1837
PspPI	GGNCC	8 cut(s)	16, 99, 160, 332, 775, 1071, 1104, 1180
PsuI	RGATCY	3 cut(s)	1357, 1387, 1787
RsaI	GTAC	5 cut(s)	240, 820, 908, 1299, 1442
RsaNI	GTAC	5 cut(s)	239, 819, 907, 1298, 1441
RseI	CAYNNNNRTG	1 cut(s)	832
Rsr2I	CGGWCCG	1 cut(s)	99
RsrII	CGGWCCG	1 cut(s)	99
SaqAI	TTAA	5 cut(s)	405, 869, 995, 1823, 1986
SatI	GCNGC	3 cut(s)	1599, 1724, 1727
Sau96I	GGNCC	8 cut(s)	16, 99, 160, 332, 775, 1071, 1104, 1180
SchI	GAGTC	2 cut(s)	794, 1638
ScrFI	CCNGG	2 cut(s)	97, 1108
SduI	GDGCHC	1 cut(s)	1838
SfaNI	GCATC	4 cut(s)	239, 643, 700, 1771
SinI	GGWCC	3 cut(s)	99, 160, 332
SmiMI	CAYNNNNRTG	1 cut(s)	832
SmlI	CTYRAG	3 cut(s)	812, 1133, 1628
SmoI	CTYRAG	3 cut(s)	812, 1133, 1628
SphI	GCATGC	2 cut(s)	1256, 1949
SsiI	CCGC	5 cut(s)	228, 313, 1549, 1599, 1729
SspMI	CTAG	3 cut(s)	279, 434, 1908
StyD4I	CCNGG	2 cut(s)	95, 1106
StyI	CCWWGG	5 cut(s)	72, 335, 420, 433, 1176
TaaI	ACNGT	2 cut(s)	103, 332
TaiI	ACGT	3 cut(s)	663, 1450, 1694
TaqI	TCGA	3 cut(s)	187, 524, 1642
TaqII	GACCGA	2 cut(s)	75, 148
TatI	WGTACW	3 cut(s)	238, 818, 1297
TauI	GCSGC	1 cut(s)	1601
TfiI	GAWTC	6 cut(s)	426, 1097, 1322, 1480, 1580, 1762
Tru1I	TTAA	5 cut(s)	405, 869, 995, 1823, 1986
Tru9I	TTAA	5 cut(s)	405, 869, 995, 1823, 1986
TscAI	CASTG	2 cut(s)	1132, 1164
TseFI	GTSAC	2 cut(s)	989, 1928
TseI	GCWGC	2 cut(s)	1723, 1726
Tsp45I	GTSAC	2 cut(s)	989, 1928
TspGWI	ACGGA	2 cut(s)	212, 1597
TspRI	CASTG	2 cut(s)	1132, 1164
Van91I	CCANNNNNTGG	2 cut(s)	1068, 1284
VpaK11BI	GGWCC	3 cut(s)	99, 160, 332
XapI	RAATTY	7 cut(s)	571, 728, 742, 872, 1815, 1859, 1982
XbaI	TCTAGA	1 cut(s)	278
XceI	RCATGY	5 cut(s)	419, 545, 1256, 1377, 1949
XcmI	CCANNNNNNNNNTGG	1 cut(s)	976
XmaJI	CCTAGG	1 cut(s)	433
XspI	CTAG	3 cut(s)	279, 434, 1908
Zsp2I	ATGCAT	1 cut(s)	839

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.