Rmu_sc0005478.1_g000006

Kynurenine formamidase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005478.1
N/A
Physical Location & Seq
Forward (+)
22828 .. 24211
1384 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 735 bp
atgaatccaatccttctccttctcctcttctcccttcagaccaccctctcttacgccaccacagcctacccttccattccaggcaccacccccgtcgacatctcctccggtgccaccgccaccaacctgatccccccctcaccgcgaaggactcattcacccccgatctcctccctgacatgccgacgtttgactccgttgactacgtcggccagttcctctggctctgagatgaagctccccacccacacggggacccacattgacgcccccggccacgtcttcgatcactacttcgatgccagcttcgacgtcgattctctcgacttggatgtccgccatcagagacgatctcaaccactcctgcaccggcctcacaatcagagcactgcatctggactccgatccccttacacaatctcctcaaccagtcctgcaccgacctcacactccaaaggatgcaggaatccggtcaccagttcggcagtcgaatttgggatttcggtgactggttatctgattccggtcactggacgccagactccggtcaccggttgccaaagcacagcaagggaatgcaacatgacagctgatgctcttgccaaaaggagtactgagcatgctcctggtctcatcatctttgaggatcctcctactcatgctgtgaatgctttcttgcatgacttagctggtatttccagacctagaggaactgggatttctgctgctccttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cyclase

Protein Analysis

244

Amino Acids

25.88

Weight (kDa)

8.44

Isoelectric Point (pI)

60.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 332
AatII GACGTC 1 cut(s) 315
AccB1I GGYRCC 2 cut(s) 83, 110
AccI GTMKAC 1 cut(s) 96
AccII CGCG 1 cut(s) 145
AciI CCGC 3 cut(s) 117, 143, 337
AclWI GGATC 4 cut(s) 124, 399, 641, 654
AcoI YGGCCR 2 cut(s) 210, 274
AcsI RAATTY 1 cut(s) 491
AcuI CTGAAG 1 cut(s) 20
AcyI GRCGYC 3 cut(s) 267, 312, 535
AfaI GTAC 1 cut(s) 613
AfiI CCNNNNNNNGG 4 cut(s) 252, 530, 544, 551
AgeI ACCGGT 1 cut(s) 551
AjiI CACGTC 1 cut(s) 280
AjnI CCWGG 2 cut(s) 79, 625
AluBI AGCT 4 cut(s) 238, 306, 590, 689
AluI AGCT 4 cut(s) 238, 306, 590, 689
Alw21I GWGCWC 1 cut(s) 389
Alw26I GTCTC 2 cut(s) 340, 635
AlwI GGATC 4 cut(s) 124, 399, 641, 654
AoxI GGCC 3 cut(s) 210, 274, 371
ApeKI GCWGC 1 cut(s) 725
ApoI RAATTY 1 cut(s) 491
AsiGI ACCGGT 1 cut(s) 551
Asp700I GAANNNNTTC 1 cut(s) 671
AspS9I GGNCC 1 cut(s) 255
AsuC2I CCSGG 1 cut(s) 273
AsuHPI GGTGA 5 cut(s) 132, 150, 466, 517, 541
AvaII GGWCC 1 cut(s) 255
BamHI GGATCC 1 cut(s) 646
BanI GGYRCC 2 cut(s) 83, 110
BbsI GAAGAC 1 cut(s) 274
Bbv12I GWGCWC 1 cut(s) 389
BbvI GCAGC 1 cut(s) 712
BccI CCATC 1 cut(s) 348
BciT130I CCWGG 2 cut(s) 81, 627
BcnI CCSGG 1 cut(s) 273
BcoDI GTCTC 2 cut(s) 340, 635
BfaI CTAG 1 cut(s) 705
BisI GCNGC 1 cut(s) 726
BlsI GCNGC 1 cut(s) 727
BmcAI AGTACT 1 cut(s) 613
Bme1390I CCNGG 3 cut(s) 81, 273, 627
Bme18I GGWCC 1 cut(s) 255
BmgBI CACGTC 1 cut(s) 280
BmgT120I GGNCC 1 cut(s) 255
BmiI GGNNCC 5 cut(s) 85, 112, 256, 257, 648
BmrFI CCNGG 3 cut(s) 81, 273, 627
BmrI ACTGGG 1 cut(s) 723
BmsI GCATC 4 cut(s) 289, 401, 449, 583
BmuI ACTGGG 1 cut(s) 723
BoxI GACNNNNGTC 1 cut(s) 545
BpiI GAAGAC 1 cut(s) 274
BplI GAGNNNNNCTC 2 cut(s) 337, 369
BpuMI CCSGG 1 cut(s) 273
BsaHI GRCGYC 3 cut(s) 267, 312, 535
BsaI GGTCTC 1 cut(s) 635
BsaJI CCNNGG 1 cut(s) 271
BsaWI WCCGGW 5 cut(s) 107, 469, 523, 544, 551
BsaXI ACNNNNNCTCC 4 cut(s) 89, 119, 404, 434
Bsc4I CCNNNNNNNGG 4 cut(s) 252, 530, 544, 551
Bse118I RCCGGY 2 cut(s) 369, 551
Bse1I ACTGG 6 cut(s) 213, 429, 477, 514, 535, 718
BseBI CCWGG 2 cut(s) 81, 627
BseDI CCNNGG 1 cut(s) 271
BseGI GGATG 2 cut(s) 337, 464
BseLI CCNNNNNNNGG 4 cut(s) 252, 530, 544, 551
BseMII CTCAG 2 cut(s) 219, 606
BseNI ACTGG 6 cut(s) 213, 429, 477, 514, 535, 718
BseRI GAGGAG 4 cut(s) 14, 94, 160, 412
BseXI GCAGC 1 cut(s) 712
BsgI GTGCAG 2 cut(s) 350, 420
Bsh1236I CGCG 1 cut(s) 145
BshFI GGCC 3 cut(s) 212, 276, 373
BshNI GGYRCC 2 cut(s) 83, 110
BshTI ACCGGT 1 cut(s) 551
BsiHKAI GWGCWC 1 cut(s) 389
BsiSI CCGG 7 cut(s) 108, 273, 370, 470, 524, 545, 552
BslFI GGGAC 1 cut(s) 268
BslI CCNNNNNNNGG 4 cut(s) 252, 530, 544, 551
BsmAI GTCTC 2 cut(s) 340, 635
BsmBI CGTCTC 1 cut(s) 340
BsmFI GGGAC 1 cut(s) 268
BsmI GAATGC 2 cut(s) 581, 673
BsnI GGCC 3 cut(s) 212, 276, 373
Bso31I GGTCTC 1 cut(s) 635
Bsp1286I GDGCHC 1 cut(s) 389
Bsp143I GATC 6 cut(s) 129, 165, 286, 350, 404, 646
BspACI CCGC 3 cut(s) 117, 143, 337
BspANI GGCC 3 cut(s) 212, 276, 373
BspCNI CTCAG 2 cut(s) 220, 607
BspFNI CGCG 1 cut(s) 145
BspLI GGNNCC 5 cut(s) 85, 112, 256, 257, 648
BspPI GGATC 4 cut(s) 124, 399, 641, 654
BspT107I GGYRCC 2 cut(s) 83, 110
BspTNI GGTCTC 1 cut(s) 635
BsrFI RCCGGY 2 cut(s) 369, 551
BsrI ACTGG 6 cut(s) 213, 429, 477, 514, 535, 718
BssAI RCCGGY 2 cut(s) 369, 551
BssECI CCNNGG 1 cut(s) 271
BssMI GATC 6 cut(s) 129, 165, 286, 350, 404, 646
BssNI GRCGYC 3 cut(s) 267, 312, 535
Bst2UI CCWGG 2 cut(s) 81, 627
Bst6I CTCTTC 1 cut(s) 32
BstACI GRCGYC 3 cut(s) 267, 312, 535
BstC8I GCNNGC 2 cut(s) 304, 621
BstDEI CTNAG 4 cut(s) 228, 615, 685, 732
BstEII GGTNACC 2 cut(s) 472, 547
BstF5I GGATG 2 cut(s) 337, 464
BstFNI CGCG 1 cut(s) 145
BstKTI GATC 6 cut(s) 132, 168, 289, 353, 407, 649
BstMAI GTCTC 2 cut(s) 340, 635
BstMBI GATC 6 cut(s) 129, 165, 286, 350, 404, 646
BstMWI GCNNNNNNNGC 2 cut(s) 62, 668
BstNI CCWGG 2 cut(s) 81, 627
BstNSI RCATGY 2 cut(s) 183, 623
BstPAI GACNNNNGTC 1 cut(s) 545
BstPI GGTNACC 2 cut(s) 472, 547
BstSCI CCNGG 3 cut(s) 79, 271, 625
BstUI CGCG 1 cut(s) 145
BstV1I GCAGC 1 cut(s) 712
BstV2I GAAGAC 1 cut(s) 274
BstX2I RGATCY 1 cut(s) 646
BstYI RGATCY 1 cut(s) 646
BsuRI GGCC 3 cut(s) 212, 276, 373
BtrI CACGTC 1 cut(s) 280
BtsCI GGATG 2 cut(s) 337, 464
BtsI GCAGTG 1 cut(s) 387
BtsIMutI CAGTG 2 cut(s) 387, 528
Cac8I GCNNGC 2 cut(s) 304, 621
Cfr10I RCCGGY 2 cut(s) 369, 551
Cfr13I GGNCC 1 cut(s) 255
CseI GACGC 2 cut(s) 275, 543
Csp6I GTAC 1 cut(s) 612
CspAI ACCGGT 1 cut(s) 551
CviAII CATG 5 cut(s) 180, 583, 620, 659, 680
CviJI RGCY 9 cut(s) 65, 212, 225, 238, 276, 306, 373, 590, 689
CviKI_1 RGCY 9 cut(s) 65, 212, 225, 238, 276, 306, 373, 590, 689
CviQI GTAC 1 cut(s) 612
DdeI CTNAG 4 cut(s) 228, 615, 685, 732
DpnI GATC 6 cut(s) 131, 167, 288, 352, 406, 648
DpnII GATC 6 cut(s) 129, 165, 286, 350, 404, 646
DrdI GACNNNNNNGTC 1 cut(s) 332
DseDI GACNNNNNNGTC 1 cut(s) 332
EaeI YGGCCR 2 cut(s) 210, 274
Eam1104I CTCTTC 1 cut(s) 32
EarI CTCTTC 1 cut(s) 32
EciI GGCGGA 1 cut(s) 326
Eco31I GGTCTC 1 cut(s) 635
Eco47I GGWCC 1 cut(s) 255
Eco57I CTGAAG 1 cut(s) 20
Eco91I GGTNACC 2 cut(s) 472, 547
EcoO109I RGGNCCY 1 cut(s) 255
EcoO65I GGTNACC 2 cut(s) 472, 547
EcoRII CCWGG 2 cut(s) 79, 625
Esp3I CGTCTC 1 cut(s) 340
FaeI CATG 5 cut(s) 183, 586, 623, 662, 683
FaiI YATR 5 cut(s) 181, 584, 621, 660, 681
FaqI GGGAC 1 cut(s) 268
FatI CATG 5 cut(s) 179, 582, 619, 658, 679
FblI GTMKAC 1 cut(s) 96
Fnu4HI GCNGC 1 cut(s) 726
FokI GGATG 2 cut(s) 344, 471
Fsp4HI GCNGC 1 cut(s) 726
FspBI CTAG 1 cut(s) 705
GluI GCNGC 1 cut(s) 726
HaeIII GGCC 3 cut(s) 212, 276, 373
HapII CCGG 7 cut(s) 108, 273, 370, 470, 524, 545, 552
HgaI GACGC 2 cut(s) 275, 543
Hin1I GRCGYC 3 cut(s) 267, 312, 535
Hin1II CATG 5 cut(s) 183, 586, 623, 662, 683
HincII GTYRAC 2 cut(s) 97, 201
HindII GTYRAC 2 cut(s) 97, 201
HinfI GANTC 8 cut(s) 4, 151, 193, 317, 399, 466, 520, 541
HpaII CCGG 7 cut(s) 108, 273, 370, 470, 524, 545, 552
HphI GGTGA 5 cut(s) 132, 150, 466, 517, 541
Hpy166II GTNNAC 2 cut(s) 97, 201
Hpy188I TCNGA 6 cut(s) 39, 229, 345, 384, 404, 519
Hpy188III TCNNGA 3 cut(s) 323, 396, 699
Hpy8I GTNNAC 2 cut(s) 97, 201
Hpy99I CGWCG 5 cut(s) 98, 189, 211, 314, 317
HpyAV CCTTC 5 cut(s) 23, 29, 44, 81, 141
HpyCH4IV ACGT 4 cut(s) 187, 206, 279, 312
HpyCH4V TGCA 6 cut(s) 367, 392, 437, 462, 579, 679
HpyF10VI GCNNNNNNNGC 2 cut(s) 62, 668
HpyF3I CTNAG 4 cut(s) 228, 615, 685, 732
HpySE526I ACGT 4 cut(s) 187, 206, 279, 312
Hsp92I GRCGYC 3 cut(s) 267, 312, 535
Hsp92II CATG 5 cut(s) 183, 586, 623, 662, 683
KflI GGGWCCC 1 cut(s) 255
Kzo9I GATC 6 cut(s) 129, 165, 286, 350, 404, 646
LmnI GCTCC 3 cut(s) 243, 628, 733
Lsp1109I GCAGC 1 cut(s) 712
LweI GCATC 4 cut(s) 289, 401, 449, 583
MaeI CTAG 1 cut(s) 705
MaeII ACGT 4 cut(s) 187, 206, 279, 312
MaeIII GTNAC 4 cut(s) 472, 505, 526, 547
MalI GATC 6 cut(s) 131, 167, 288, 352, 406, 648
MboI GATC 6 cut(s) 129, 165, 286, 350, 404, 646
MboII GAAGA 2 cut(s) 19, 274
MflI RGATCY 1 cut(s) 646
MhlI GDGCHC 1 cut(s) 389
MluCI AATT 1 cut(s) 491
MlyI GAGTC 4 cut(s) 145, 187, 393, 535
MroXI GAANNNNTTC 1 cut(s) 671
MspA1I CMGCKG 1 cut(s) 590
MspI CCGG 7 cut(s) 108, 273, 370, 470, 524, 545, 552
MspR9I CCNGG 3 cut(s) 81, 273, 627
Mva1269I GAATGC 2 cut(s) 581, 673
MvaI CCWGG 2 cut(s) 81, 627
MvnI CGCG 1 cut(s) 145
MwoI GCNNNNNNNGC 2 cut(s) 62, 668
NciI CCSGG 1 cut(s) 273
NdeII GATC 6 cut(s) 129, 165, 286, 350, 404, 646
NlaIII CATG 5 cut(s) 183, 586, 623, 662, 683
NlaIV GGNNCC 5 cut(s) 85, 112, 256, 257, 648
NmuCI GTSAC 4 cut(s) 472, 505, 526, 547
NspI RCATGY 2 cut(s) 183, 623
PaeI GCATGC 1 cut(s) 623
PcsI WCGNNNNNNNCGW 1 cut(s) 321
PctI GAATGC 2 cut(s) 581, 673
PdmI GAANNNNTTC 1 cut(s) 671
PfeI GAWTC 4 cut(s) 4, 317, 466, 520
PflFI GACNNNGTC 1 cut(s) 205
PinAI ACCGGT 1 cut(s) 551
PkrI GCNGC 1 cut(s) 727
PleI GAGTC 4 cut(s) 145, 187, 393, 535
PpsI GAGTC 4 cut(s) 145, 187, 393, 535
PpuMI RGGWCCY 1 cut(s) 255
PshAI GACNNNNGTC 1 cut(s) 545
Psp5II RGGWCCY 1 cut(s) 255
Psp6I CCWGG 2 cut(s) 79, 625
PspEI GGTNACC 2 cut(s) 472, 547
PspGI CCWGG 2 cut(s) 79, 625
PspN4I GGNNCC 5 cut(s) 85, 112, 256, 257, 648
PspPI GGNCC 1 cut(s) 255
PspPPI RGGWCCY 1 cut(s) 255
PsuI RGATCY 1 cut(s) 646
PsyI GACNNNGTC 1 cut(s) 205
PvuII CAGCTG 1 cut(s) 590
RsaI GTAC 1 cut(s) 613
RsaNI GTAC 1 cut(s) 612
SalI GTCGAC 1 cut(s) 95
SatI GCNGC 1 cut(s) 726
Sau3AI GATC 6 cut(s) 129, 165, 286, 350, 404, 646
Sau96I GGNCC 1 cut(s) 255
ScaI AGTACT 1 cut(s) 613
SchI GAGTC 4 cut(s) 145, 187, 393, 535
ScrFI CCNGG 3 cut(s) 81, 273, 627
SduI GDGCHC 1 cut(s) 389
SfaNI GCATC 4 cut(s) 289, 401, 449, 583
SinI GGWCC 1 cut(s) 255
SphI GCATGC 1 cut(s) 623
Sse9I AATT 1 cut(s) 491
SsiI CCGC 3 cut(s) 117, 143, 337
SspMI CTAG 1 cut(s) 705
StyD4I CCNGG 3 cut(s) 79, 271, 625
TaiI ACGT 4 cut(s) 190, 209, 282, 315
TaqI TCGA 7 cut(s) 96, 285, 297, 309, 315, 324, 489
TasI AATT 1 cut(s) 491
TatI WGTACW 1 cut(s) 611
TfiI GAWTC 4 cut(s) 4, 317, 466, 520
TscAI CASTG 2 cut(s) 394, 535
TseFI GTSAC 4 cut(s) 472, 505, 526, 547
TseI GCWGC 1 cut(s) 725
Tsp45I GTSAC 4 cut(s) 472, 505, 526, 547
TspDTI ATGAA 2 cut(s) 17, 248
TspGWI ACGGA 1 cut(s) 186
TspRI CASTG 2 cut(s) 394, 535
Tth111I GACNNNGTC 1 cut(s) 205
VpaK11BI GGWCC 1 cut(s) 255
XapI RAATTY 1 cut(s) 491
XceI RCATGY 2 cut(s) 183, 623
XmiI GTMKAC 1 cut(s) 96
XmnI GAANNNNTTC 1 cut(s) 671
XspI CTAG 1 cut(s) 705
ZraI GACGTC 1 cut(s) 313
ZrmI AGTACT 1 cut(s) 613
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.