Rmu_sc0005532.1_g000007

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005532.1
N/A
Physical Location & Seq
Reverse (-)
22708 .. 23031
324 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 324 bp
atggccaagccccaaaacaaaagcactactccagtgaatgtgggggtcgttcttcatgaccttaatcattcagttagtggaaaaggcaagctccggtggaaaaggcagttccaaaaagaccatccactcgtctttggcgctgaattggatgtttctggactttgggcttatgatgctgcttttgcacttgcaatggcaattgaacgggtaattggaactggtagtagtttcggcttccaaaagtcgaatgcttctaacaactcgacaggacttgacacttttcttacctctccatatggtccaaaactttgcgaagccttgtaa

Protein Analysis

107

Amino Acids

11.54

Weight (kDa)

9.21

Isoelectric Point (pI)

32.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 3
AgsI TTSAA 1 cut(s) 203
AjuI GAANNNNNNNTTGG 2 cut(s) 195, 227
AluBI AGCT 1 cut(s) 91
AluI AGCT 1 cut(s) 91
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 1 cut(s) 176
AspLEI GCGC 1 cut(s) 140
AspS9I GGNCC 1 cut(s) 299
AvaII GGWCC 1 cut(s) 299
BalI TGGCCA 1 cut(s) 5
BbvI GCAGC 1 cut(s) 163
BccI CCATC 1 cut(s) 129
BfoI RGCGCY 1 cut(s) 141
BisI GCNGC 1 cut(s) 177
BlsI GCNGC 1 cut(s) 178
Bme18I GGWCC 1 cut(s) 299
BmgT120I GGNCC 1 cut(s) 299
BmsI GCATC 1 cut(s) 163
BpmI CTGGAG 1 cut(s) 15
BsaWI WCCGGW 1 cut(s) 93
Bse1I ACTGG 2 cut(s) 32, 223
Bse3DI GCAATG 1 cut(s) 198
BseGI GGATG 2 cut(s) 121, 154
BseMI GCAATG 1 cut(s) 198
BseNI ACTGG 2 cut(s) 32, 223
BseXI GCAGC 1 cut(s) 163
BshFI GGCC 1 cut(s) 5
BsiSI CCGG 1 cut(s) 94
BsmI GAATGC 1 cut(s) 253
BsnI GGCC 1 cut(s) 5
BspANI GGCC 1 cut(s) 5
BspHI TCATGA 1 cut(s) 55
BsrDI GCAATG 1 cut(s) 198
BsrI ACTGG 2 cut(s) 32, 223
BstC8I GCNNGC 1 cut(s) 89
BstF5I GGATG 2 cut(s) 121, 154
BstH2I RGCGCY 1 cut(s) 141
BstHHI GCGC 1 cut(s) 140
BstMWI GCNNNNNNNGC 2 cut(s) 173, 182
BstV1I GCAGC 1 cut(s) 163
BsuRI GGCC 1 cut(s) 5
BtsCI GGATG 2 cut(s) 121, 154
BtsIMutI CAGTG 1 cut(s) 39
Cac8I GCNNGC 1 cut(s) 89
CciI TCATGA 1 cut(s) 55
CfoI GCGC 1 cut(s) 140
Cfr13I GGNCC 1 cut(s) 299
CviAII CATG 1 cut(s) 56
CviJI RGCY 6 cut(s) 5, 10, 91, 167, 234, 317
CviKI_1 RGCY 6 cut(s) 5, 10, 91, 167, 234, 317
EaeI YGGCCR 1 cut(s) 3
Eco47I GGWCC 1 cut(s) 299
FaeI CATG 1 cut(s) 59
FaiI YATR 4 cut(s) 57, 171, 295, 297
FatI CATG 1 cut(s) 55
FauNDI CATATG 1 cut(s) 295
Fnu4HI GCNGC 1 cut(s) 177
FokI GGATG 2 cut(s) 108, 161
Fsp4HI GCNGC 1 cut(s) 177
GlaI GCGC 1 cut(s) 139
GluI GCNGC 1 cut(s) 177
GsuI CTGGAG 1 cut(s) 15
HaeII RGCGCY 1 cut(s) 141
HaeIII GGCC 1 cut(s) 5
HapII CCGG 1 cut(s) 94
HhaI GCGC 1 cut(s) 140
Hin1II CATG 1 cut(s) 59
Hin6I GCGC 1 cut(s) 138
HinP1I GCGC 1 cut(s) 138
HpaII CCGG 1 cut(s) 94
Hpy188III TCNNGA 2 cut(s) 56, 156
HpyCH4V TGCA 2 cut(s) 185, 191
HpyF10VI GCNNNNNNNGC 2 cut(s) 173, 182
Hsp92II CATG 1 cut(s) 59
HspAI GCGC 1 cut(s) 138
LmnI GCTCC 1 cut(s) 96
LpnPI CCDG 5 cut(s) 45, 107, 141, 204, 252
Lsp1109I GCAGC 1 cut(s) 163
LweI GCATC 1 cut(s) 163
MboII GAAGA 1 cut(s) 44
MfeI CAATTG 1 cut(s) 198
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 3 cut(s) 143, 198, 210
MluNI TGGCCA 1 cut(s) 5
MnlI CCTC 1 cut(s) 298
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 1 cut(s) 63
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 1 cut(s) 94
MunI CAATTG 1 cut(s) 198
Mva1269I GAATGC 1 cut(s) 253
MwoI GCNNNNNNNGC 2 cut(s) 173, 182
NdeI CATATG 1 cut(s) 295
NlaIII CATG 1 cut(s) 59
PagI TCATGA 1 cut(s) 55
PctI GAATGC 1 cut(s) 253
PkrI GCNGC 1 cut(s) 178
PspPI GGNCC 1 cut(s) 299
SaqAI TTAA 1 cut(s) 63
SatI GCNGC 1 cut(s) 177
Sau96I GGNCC 1 cut(s) 299
SetI ASST 3 cut(s) 63, 93, 290
SfaNI GCATC 1 cut(s) 163
SinI GGWCC 1 cut(s) 299
Sse9I AATT 3 cut(s) 143, 198, 210
TaqI TCGA 2 cut(s) 245, 263
TasI AATT 3 cut(s) 143, 198, 210
Tru1I TTAA 1 cut(s) 63
Tru9I TTAA 1 cut(s) 63
TscAI CASTG 1 cut(s) 39
TseI GCWGC 1 cut(s) 176
TspDTI ATGAA 1 cut(s) 44
TspRI CASTG 1 cut(s) 39
VpaK11BI GGWCC 1 cut(s) 299
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.