Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005847.1

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

1554 .. 10167

Gene Structure 8614 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1911 bp

atggaggagaataaacagccactgctgtcgccaagagacgaggtggtgggagttccacagcatcatcaaccgatgcatgacaacctagattccttccctgcacccgcaaacccttctttcatttccagcactaccttcaatcccgactccgacgacattccacccatcaatggcgtccgcgacttcttccgagagttcaaccgagaatcgaagaagctctggtttctcgccggccccgccatcttcacttcactatgccagtactctctcggcgccgtcactcaagtcttcgccggccaggtcagcaccatcgacctcgccgccgtctccatcgagaactcggtcatcgctggattctgcttcggcgctttgctcggcatggggagtgcgcttgaaacgctgtgcggccaagcggtcggagccggacatctggacatgttaggaatctacatgcagaggtcgtgggtgatcctcaacgccaccagcgtagtgttgtgctttctgtacatttttgctcagcagattctgtacggaataggacagacggcggcgatatccaaggcggcgggggtgttcgccatatacatgataccgcagctgttcgcgtacgccatggtttttccgttggccaagtttctgcagtcgcagagcaagatgatggtgatggcggtgatcgcggcggtgacgctgatattgcacacggtgttcagctggctactgatgttgaagctcgggtggggcctggtgggcgcggcggtggtgctgaacgcgtcgtggtggatcatagtggtttctcagatggtgtacattttttccgggacttgtggtcgggcgtggactggtttctcatggaaggccttccatggtctgtgggcgtttgttaagttgtctcttgcgtcggcagtcatgctctgtttggaagtttggtattttatggcgttgattctcttcgctggatatctaaagaatgcagaagtttctgtggacggcctatccatatgcatgaacatattgggatggacaatcatgatgtcttttggcatgaatgcagcaataaggcccaacaatgaaagcttgacccaagcccaccgtccatctgcagcctccaatggtcgaccgctgccacccgataccagatcccgccgccgcaatcggtaccagccctcgccactgccactgactccagcctcgccgccgcaccgcaagacccgacctcgctgcctcaacccacgtcgaagcccgaccgaaccacgtcgaaaccagtcgaaagcagcccgattccgcatgtcaccgccaccgtccagcccctccaccacgctgccggtcatggggatccaggaagtgcctcaacactcgatccgcgttgcgccgccgcccactgagtccaaaatttcttccattgctcgtcgccaaaaccatccagcgccggacttgagtcgtaacccctctccaagaaactgtcgggccactagttttcaaattcccatccggcagtcgcgtcaagcaggcgaggcgagccaacgccgcccaagcacgccgccggacaagaagaaactcactcccttgctggcaacctgcattgtcatcaataacgttcaacctgtactctctggtgttgcaattggagcaggatggcaagcttttgtggcttatgtcaacataggctgttactatgtagttggggtaccattgggtttactctttgggtacaaatttgactggggtgttatggggatttggactggaatgctgttagggacagttcttcagacttgtgtccttttctatttggtttataagaccaactggaacaaagaggcttctatagctgaagacaggataaggaaatggggaggccaatcaaacaatcccaaagacgcggagaataatggcgcaaaagtttcgagttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006855 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009624 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0015238 GO:0015893 GO:0016020 GO:0016049 GO:0021700 GO:0022622 GO:0022857 GO:0030154 GO:0031090 GO:0032501 GO:0032502 GO:0040007 GO:0042221 GO:0042493 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0060560 GO:0071695 GO:0080147 GO:0090558 GO:0090627 GO:0098588 GO:0098805 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

636

Amino Acids

69.9

Weight (kDa)

9.71

Isoelectric Point (pI)

51.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	79 - 239	1.3e-31	MatE
MatE	PF01554	300 - 352	3.7e-07	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1797
Acc36I	ACCTGC	1 cut(s)	1583
Acc65I	GGTACC	2 cut(s)	1155, 1684
AccB1I	GGYRCC	3 cut(s)	272, 1155, 1684
AccI	GTMKAC	1 cut(s)	1114
AccII	CGCG	8 cut(s)	180, 605, 677, 752, 770, 1362, 1498, 1880
AclI	AACGTT	1 cut(s)	1593
AclWI	GGATC	6 cut(s)	463, 788, 1131, 1327, 1340, 1351
AcoI	YGGCCR	3 cut(s)	295, 406, 627
AcsI	RAATTY	3 cut(s)	1389, 1479, 1712
AcuI	CTGAAG	2 cut(s)	1751, 1851
AcyI	GRCGYC	2 cut(s)	174, 273
AdeI	CACNNNGTG	1 cut(s)	703
AfaI	GTAC	9 cut(s)	263, 506, 530, 608, 806, 1157, 1605, 1686, 1709
AfiI	CCNNNNNNNGG	2 cut(s)	170, 1328
AflIII	ACRYGT	2 cut(s)	435, 768
AgsI	TTSAA	6 cut(s)	139, 199, 395, 727, 1478, 1598
AhdI	GACNNNNNGTC	1 cut(s)	825
AhlI	ACTAGT	1 cut(s)	1469
AjiI	CACGTC	2 cut(s)	1232, 1253
AjnI	CCWGG	3 cut(s)	297, 741, 1335
AluBI	AGCT	7 cut(s)	217, 598, 711, 730, 1074, 1640, 1829
AluI	AGCT	7 cut(s)	217, 598, 711, 730, 1074, 1640, 1829
Alw26I	GTCTC	3 cut(s)	30, 331, 894
AlwI	GGATC	6 cut(s)	463, 788, 1131, 1327, 1340, 1351
AlwNI	CAGNNNCTG	2 cut(s)	22, 526
Ama87I	CYCGRG	1 cut(s)	731
ApeKI	GCWGC	7 cut(s)	595, 1049, 1100, 1120, 1218, 1271, 1318
ApoI	RAATTY	3 cut(s)	1389, 1479, 1712
Asp700I	GAANNNNTTC	1 cut(s)	857
Asp718I	GGTACC	2 cut(s)	1155, 1684
AspLEI	GCGC	7 cut(s)	275, 368, 391, 752, 1369, 1426, 1895
AspS9I	GGNCC	4 cut(s)	233, 739, 1059, 1464
AsuC2I	CCSGG	1 cut(s)	817
AsuHPI	GGTGA	5 cut(s)	478, 673, 682, 694, 1281
AvaI	CYCGRG	1 cut(s)	731
BalI	TGGCCA	1 cut(s)	629
BamHI	GGATCC	1 cut(s)	1332
BanI	GGYRCC	3 cut(s)	272, 1155, 1684
BbsI	GAAGAC	2 cut(s)	280, 1839
BbvI	GCAGC	7 cut(s)	607, 1061, 1107, 1112, 1205, 1283, 1305
BceAI	ACGGC	4 cut(s)	260, 308, 561, 1003
BcgI	CGANNNNNNTGC	3 cut(s)	1200, 1234, 1884
BciT130I	CCWGG	3 cut(s)	299, 743, 1337
BcnI	CCSGG	1 cut(s)	817
BcoDI	GTCTC	3 cut(s)	30, 331, 894
BcuI	ACTAGT	1 cut(s)	1469
BfaI	CTAG	2 cut(s)	86, 1470
BfmI	CTRYAG	3 cut(s)	638, 1098, 1824
BfoI	RGCGCY	3 cut(s)	276, 369, 1427
BfuAI	ACCTGC	1 cut(s)	1583
BglI	GCCNNNNNGGC	1 cut(s)	747
BlpI	GCTNAGC	1 cut(s)	516
BmcAI	AGTACT	1 cut(s)	263
Bme1390I	CCNGG	4 cut(s)	299, 743, 817, 1337
BmeRI	GACNNNNNGTC	1 cut(s)	825
BmeT110I	CYCGRG	1 cut(s)	731
BmgBI	CACGTC	2 cut(s)	1232, 1253
BmgT120I	GGNCC	4 cut(s)	233, 739, 1059, 1464
BmiI	GGNNCC	7 cut(s)	235, 274, 421, 740, 1157, 1334, 1686
BmrFI	CCNGG	4 cut(s)	299, 743, 817, 1337
BmrI	ACTGGG	1 cut(s)	1729
BmsI	GCATC	2 cut(s)	63, 70
BmuI	ACTGGG	1 cut(s)	1729
BoxI	GACNNNNGTC	2 cut(s)	1434, 1775
BpiI	GAAGAC	2 cut(s)	280, 1839
BpmI	CTGGAG	1 cut(s)	1167
Bpu1102I	GCTNAGC	1 cut(s)	516
BpuEI	CTTGAG	2 cut(s)	267, 1453
BpuMI	CCSGG	1 cut(s)	817
BsaHI	GRCGYC	2 cut(s)	174, 273
BsaJI	CCNNGG	3 cut(s)	558, 612, 862
Bsc4I	CCNNNNNNNGG	2 cut(s)	170, 1328
Bse118I	RCCGGY	3 cut(s)	230, 293, 1321
Bse1I	ACTGG	6 cut(s)	259, 844, 1261, 1724, 1747, 1811
Bse3DI	GCAATG	1 cut(s)	1398
BseBI	CCWGG	3 cut(s)	299, 743, 1337
BseDI	CCNNGG	3 cut(s)	558, 612, 862
BseGI	GGATG	4 cut(s)	1022, 1417, 1485, 1637
BseLI	CCNNNNNNNGG	2 cut(s)	170, 1328
BseMI	GCAATG	1 cut(s)	1398
BseMII	CTCAG	3 cut(s)	530, 809, 1371
BseNI	ACTGG	6 cut(s)	259, 844, 1261, 1724, 1747, 1811
BseRI	GAGGAG	1 cut(s)	20
BseXI	GCAGC	7 cut(s)	607, 1061, 1107, 1112, 1205, 1283, 1305
BsgI	GTGCAG	1 cut(s)	84
Bsh1236I	CGCG	8 cut(s)	180, 605, 677, 752, 770, 1362, 1498, 1880
Bsh1285I	CGRYCG	3 cut(s)	417, 1118, 1245
BshNI	GGYRCC	3 cut(s)	272, 1155, 1684
BsiEI	CGRYCG	3 cut(s)	417, 1118, 1245
BsiHKCI	CYCGRG	1 cut(s)	731
BsiSI	CCGG	8 cut(s)	231, 294, 423, 816, 1322, 1427, 1489, 1541
BsiWI	CGTACG	1 cut(s)	606
BslFI	GGGAC	2 cut(s)	832, 1771
BslI	CCNNNNNNNGG	2 cut(s)	170, 1328
BsmAI	GTCTC	3 cut(s)	30, 331, 894
BsmBI	CGTCTC	2 cut(s)	30, 331
BsmFI	GGGAC	2 cut(s)	832, 1771
BsmI	GAATGC	3 cut(s)	973, 1051, 1752
BsoBI	CYCGRG	1 cut(s)	731
Bsp1407I	TGTACA	2 cut(s)	504, 804
Bsp143I	GATC	6 cut(s)	468, 672, 780, 1136, 1332, 1356
Bsp1720I	GCTNAGC	1 cut(s)	516
Bsp19I	CCATGG	2 cut(s)	612, 862
BspCNI	CTCAG	3 cut(s)	529, 808, 1372
BspFNI	CGCG	8 cut(s)	180, 605, 677, 752, 770, 1362, 1498, 1880
BspHI	TCATGA	1 cut(s)	1026
BspLI	GGNNCC	7 cut(s)	235, 274, 421, 740, 1157, 1334, 1686
BspMAI	CTGCAG	2 cut(s)	642, 1102
BspMI	ACCTGC	1 cut(s)	1583
BspPI	GGATC	6 cut(s)	463, 788, 1131, 1327, 1340, 1351
BspT107I	GGYRCC	3 cut(s)	272, 1155, 1684
BsrDI	GCAATG	1 cut(s)	1398
BsrFI	RCCGGY	3 cut(s)	230, 293, 1321
BsrGI	TGTACA	2 cut(s)	504, 804
BsrI	ACTGG	6 cut(s)	259, 844, 1261, 1724, 1747, 1811
BssAI	RCCGGY	3 cut(s)	230, 293, 1321
BssECI	CCNNGG	3 cut(s)	558, 612, 862
BssMI	GATC	6 cut(s)	468, 672, 780, 1136, 1332, 1356
BssNI	GRCGYC	2 cut(s)	174, 273
BssT1I	CCWWGG	3 cut(s)	558, 612, 862
Bst2UI	CCWGG	3 cut(s)	299, 743, 1337
Bst4CI	ACNGT	5 cut(s)	703, 1091, 1299, 1460, 1762
Bst6I	CTCTTC	1 cut(s)	953
BstACI	GRCGYC	2 cut(s)	174, 273
BstAUI	TGTACA	2 cut(s)	504, 804
BstC8I	GCNNGC	8 cut(s)	232, 295, 713, 1507, 1516, 1535, 1569, 1638
BstDEI	CTNAG	3 cut(s)	516, 795, 1380
BstDSI	CCRYGG	2 cut(s)	612, 862
BstF5I	GGATG	4 cut(s)	1022, 1417, 1485, 1637
BstFNI	CGCG	8 cut(s)	180, 605, 677, 752, 770, 1362, 1498, 1880
BstH2I	RGCGCY	3 cut(s)	276, 369, 1427
BstHHI	GCGC	7 cut(s)	275, 368, 391, 752, 1369, 1426, 1895
BstKTI	GATC	6 cut(s)	471, 675, 783, 1139, 1335, 1359
BstMAI	GTCTC	3 cut(s)	30, 331, 894
BstMBI	GATC	6 cut(s)	468, 672, 780, 1136, 1332, 1356
BstMCI	CGRYCG	3 cut(s)	417, 1118, 1245
BstNI	CCWGG	3 cut(s)	299, 743, 1337
BstNSI	RCATGY	3 cut(s)	439, 454, 1288
BstPAI	GACNNNNGTC	2 cut(s)	1434, 1775
BstSCI	CCNGG	4 cut(s)	297, 741, 815, 1335
BstSFI	CTRYAG	3 cut(s)	638, 1098, 1824
BstUI	CGCG	8 cut(s)	180, 605, 677, 752, 770, 1362, 1498, 1880
BstV1I	GCAGC	7 cut(s)	607, 1061, 1107, 1112, 1205, 1283, 1305
BstV2I	GAAGAC	2 cut(s)	280, 1839
BstX2I	RGATCY	2 cut(s)	1136, 1332
BstYI	RGATCY	2 cut(s)	1136, 1332
BtgI	CCRYGG	2 cut(s)	612, 862
BtgZI	GCGATG	1 cut(s)	331
BtrI	CACGTC	2 cut(s)	1232, 1253
BtsCI	GGATG	4 cut(s)	1022, 1417, 1485, 1637
BtsI	GCAGTG	2 cut(s)	20, 1169
BtsIMutI	CAGTG	4 cut(s)	20, 1169, 1175, 1377
BveI	ACCTGC	1 cut(s)	1583
Cac8I	GCNNGC	8 cut(s)	232, 295, 713, 1507, 1516, 1535, 1569, 1638
CaiI	CAGNNNCTG	2 cut(s)	22, 526
CciI	TCATGA	1 cut(s)	1026
CfoI	GCGC	7 cut(s)	275, 368, 391, 752, 1369, 1426, 1895
Cfr10I	RCCGGY	3 cut(s)	230, 293, 1321
Cfr13I	GGNCC	4 cut(s)	233, 739, 1059, 1464
CseI	GACGC	6 cut(s)	163, 694, 759, 885, 1487, 1886
Csp6I	GTAC	9 cut(s)	262, 505, 529, 607, 805, 1156, 1604, 1685, 1708
CviQI	GTAC	9 cut(s)	262, 505, 529, 607, 805, 1156, 1604, 1685, 1708
DdeI	CTNAG	3 cut(s)	516, 795, 1380
DinI	GGCGCC	1 cut(s)	274
DpnI	GATC	6 cut(s)	470, 674, 782, 1138, 1334, 1358
DpnII	GATC	6 cut(s)	468, 672, 780, 1136, 1332, 1356
DraIII	CACNNNGTG	1 cut(s)	703
DriI	GACNNNNNGTC	1 cut(s)	825
EaeI	YGGCCR	3 cut(s)	295, 406, 627
Eam1104I	CTCTTC	1 cut(s)	953
Eam1105I	GACNNNNNGTC	1 cut(s)	825
EarI	CTCTTC	1 cut(s)	953
Eco130I	CCWWGG	3 cut(s)	558, 612, 862
Eco147I	AGGCCT	1 cut(s)	857
Eco32I	GATATC	2 cut(s)	555, 959
Eco57I	CTGAAG	2 cut(s)	1751, 1851
Eco88I	CYCGRG	1 cut(s)	731
EcoO109I	RGGNCCY	1 cut(s)	739
EcoRII	CCWGG	3 cut(s)	297, 741, 1335
EcoRV	GATATC	2 cut(s)	555, 959
EcoT14I	CCWWGG	3 cut(s)	558, 612, 862
EcoT22I	ATGCAT	2 cut(s)	78, 1004
EgeI	GGCGCC	1 cut(s)	274
EheI	GGCGCC	1 cut(s)	274
ErhI	CCWWGG	3 cut(s)	558, 612, 862
Esp3I	CGTCTC	2 cut(s)	30, 331
FaqI	GGGAC	2 cut(s)	832, 1771
FauI	CCCGC	4 cut(s)	112, 244, 559, 1148
FauNDI	CATATG	1 cut(s)	998
FblI	GTMKAC	1 cut(s)	1114
FokI	GGATG	4 cut(s)	1029, 1404, 1472, 1644
FspBI	CTAG	2 cut(s)	86, 1470
GlaI	GCGC	7 cut(s)	274, 367, 390, 751, 1368, 1425, 1894
GsuI	CTGGAG	1 cut(s)	1167
HaeII	RGCGCY	3 cut(s)	276, 369, 1427
HapII	CCGG	8 cut(s)	231, 294, 423, 816, 1322, 1427, 1489, 1541
HgaI	GACGC	6 cut(s)	163, 694, 759, 885, 1487, 1886
HhaI	GCGC	7 cut(s)	275, 368, 391, 752, 1369, 1426, 1895
Hin1I	GRCGYC	2 cut(s)	174, 273
Hin6I	GCGC	7 cut(s)	273, 366, 389, 750, 1367, 1424, 1893
HinP1I	GCGC	7 cut(s)	273, 366, 389, 750, 1367, 1424, 1893
HincII	GTYRAC	2 cut(s)	1115, 1657
HindII	GTYRAC	2 cut(s)	1115, 1657
HindIII	AAGCTT	2 cut(s)	1072, 1638
HpaII	CCGG	8 cut(s)	231, 294, 423, 816, 1322, 1427, 1489, 1541
HphI	GGTGA	5 cut(s)	478, 673, 682, 694, 1281
Hpy166II	GTNNAC	6 cut(s)	805, 837, 985, 1115, 1657, 1697
Hpy188I	TCNGA	5 cut(s)	151, 191, 419, 798, 1770
Hpy188III	TCNNGA	4 cut(s)	143, 334, 431, 1027
Hpy8I	GTNNAC	6 cut(s)	805, 837, 985, 1115, 1657, 1697
Hpy99I	CGWCG	6 cut(s)	155, 775, 901, 1236, 1257, 1410
HpyAV	CCTTC	5 cut(s)	103, 123, 145, 847, 868
HpyCH4III	ACNGT	5 cut(s)	703, 1091, 1299, 1460, 1762
HpyCH4IV	ACGT	3 cut(s)	1231, 1252, 1593
HpyF3I	CTNAG	3 cut(s)	516, 795, 1380
HpySE526I	ACGT	3 cut(s)	1231, 1252, 1593
Hsp92I	GRCGYC	2 cut(s)	174, 273
HspAI	GCGC	7 cut(s)	273, 366, 389, 750, 1367, 1424, 1893
KasI	GGCGCC	1 cut(s)	272
KpnI	GGTACC	2 cut(s)	1159, 1688
KroI	GCCGGC	2 cut(s)	230, 293
KroNI	GCCGGC	2 cut(s)	232, 295
Kzo9I	GATC	6 cut(s)	468, 672, 780, 1136, 1332, 1356
LmnI	GCTCC	2 cut(s)	419, 1625
Lsp1109I	GCAGC	7 cut(s)	607, 1061, 1107, 1112, 1205, 1283, 1305
LweI	GCATC	2 cut(s)	63, 70
MaeI	CTAG	2 cut(s)	86, 1470
MaeII	ACGT	3 cut(s)	1231, 1252, 1593
MaeIII	GTNAC	5 cut(s)	277, 682, 1287, 1439, 1667
MalI	GATC	6 cut(s)	470, 674, 782, 1138, 1334, 1358
MboI	GATC	6 cut(s)	468, 672, 780, 1136, 1332, 1356
MboII	GAAGA	9 cut(s)	178, 223, 235, 280, 940, 1386, 1561, 1757, 1844
MfeI	CAATTG	1 cut(s)	1620
MflI	RGATCY	2 cut(s)	1136, 1332
MlsI	TGGCCA	1 cut(s)	629
MluCI	AATT	4 cut(s)	1389, 1479, 1620, 1712
MluI	ACGCGT	1 cut(s)	768
MluNI	TGGCCA	1 cut(s)	629
Mly113I	GGCGCC	1 cut(s)	273
MlyI	GAGTC	4 cut(s)	140, 1174, 1391, 1444
MmeI	TCCRAC	2 cut(s)	174, 397
Mox20I	TGGCCA	1 cut(s)	629
Mph1103I	ATGCAT	2 cut(s)	78, 1004
MroNI	GCCGGC	2 cut(s)	230, 293
MroXI	GAANNNNTTC	1 cut(s)	857
MscI	TGGCCA	1 cut(s)	629
MseI	TTAA	2 cut(s)	882, 1909
MslI	CAYNNNNRTG	2 cut(s)	584, 1001
Msp20I	TGGCCA	1 cut(s)	629
MspA1I	CMGCKG	3 cut(s)	598, 711, 1120
MspI	CCGG	8 cut(s)	231, 294, 423, 816, 1322, 1427, 1489, 1541
MspR9I	CCNGG	4 cut(s)	299, 743, 817, 1337
MunI	CAATTG	1 cut(s)	1620
Mva1269I	GAATGC	3 cut(s)	973, 1051, 1752
MvaI	CCWGG	3 cut(s)	299, 743, 1337
MvnI	CGCG	8 cut(s)	180, 605, 677, 752, 770, 1362, 1498, 1880
NaeI	GCCGGC	2 cut(s)	232, 295
NarI	GGCGCC	1 cut(s)	273
NciI	CCSGG	1 cut(s)	817
NcoI	CCATGG	2 cut(s)	612, 862
NdeI	CATATG	1 cut(s)	998
NdeII	GATC	6 cut(s)	468, 672, 780, 1136, 1332, 1356
NgoMIV	GCCGGC	2 cut(s)	230, 293
NlaIV	GGNNCC	7 cut(s)	235, 274, 421, 740, 1157, 1334, 1686
NmeAIII	GCCGAG	2 cut(s)	249, 354
NmuCI	GTSAC	3 cut(s)	277, 682, 1287
NsiI	ATGCAT	2 cut(s)	78, 1004
NspI	RCATGY	3 cut(s)	439, 454, 1288
PagI	TCATGA	1 cut(s)	1026
PceI	AGGCCT	1 cut(s)	857
PciI	ACATGT	1 cut(s)	435
PcsI	WCGNNNNNNNCGW	1 cut(s)	483
PctI	GAATGC	3 cut(s)	973, 1051, 1752
PdiI	GCCGGC	2 cut(s)	232, 295
PdmI	GAANNNNTTC	1 cut(s)	857
PfeI	GAWTC	7 cut(s)	89, 206, 354, 444, 523, 943, 1278
Pfl23II	CGTACG	1 cut(s)	606
PfoI	TCCNGGA	2 cut(s)	815, 1335
PleI	GAGTC	4 cut(s)	140, 1174, 1390, 1443
PluTI	GGCGCC	1 cut(s)	276
PpsI	GAGTC	4 cut(s)	140, 1174, 1390, 1443
PscI	ACATGT	1 cut(s)	435
PshAI	GACNNNNGTC	2 cut(s)	1434, 1775
PsiI	TTATAA	1 cut(s)	1797
Psp1406I	AACGTT	1 cut(s)	1593
Psp6I	CCWGG	3 cut(s)	297, 741, 1335
PspGI	CCWGG	3 cut(s)	297, 741, 1335
PspLI	CGTACG	1 cut(s)	606
PspN4I	GGNNCC	7 cut(s)	235, 274, 421, 740, 1157, 1334, 1686
PspPI	GGNCC	4 cut(s)	233, 739, 1059, 1464
PstI	CTGCAG	2 cut(s)	642, 1102
PstNI	CAGNNNCTG	2 cut(s)	22, 526
PsuI	RGATCY	2 cut(s)	1136, 1332
PvuII	CAGCTG	2 cut(s)	598, 711
RsaI	GTAC	9 cut(s)	263, 506, 530, 608, 806, 1157, 1605, 1686, 1709
RsaNI	GTAC	9 cut(s)	262, 505, 529, 607, 805, 1156, 1604, 1685, 1708
RseI	CAYNNNNRTG	2 cut(s)	584, 1001
SalI	GTCGAC	1 cut(s)	1113
SaqAI	TTAA	2 cut(s)	882, 1909
Sau3AI	GATC	6 cut(s)	468, 672, 780, 1136, 1332, 1356
Sau96I	GGNCC	4 cut(s)	233, 739, 1059, 1464
ScaI	AGTACT	1 cut(s)	263
SchI	GAGTC	4 cut(s)	140, 1174, 1391, 1444
ScrFI	CCNGG	4 cut(s)	299, 743, 817, 1337
SfaNI	GCATC	2 cut(s)	63, 70
SfcI	CTRYAG	3 cut(s)	638, 1098, 1824
SfoI	GGCGCC	1 cut(s)	274
SmiMI	CAYNNNNRTG	2 cut(s)	584, 1001
SmlI	CTYRAG	2 cut(s)	282, 1432
SmoI	CTYRAG	2 cut(s)	282, 1432
SpeI	ACTAGT	1 cut(s)	1469
Sse9I	AATT	4 cut(s)	1389, 1479, 1620, 1712
SseBI	AGGCCT	1 cut(s)	857
SspDI	GGCGCC	1 cut(s)	272
SspMI	CTAG	2 cut(s)	86, 1470
StuI	AGGCCT	1 cut(s)	857
StyD4I	CCNGG	4 cut(s)	297, 741, 815, 1335
StyI	CCWWGG	3 cut(s)	558, 612, 862
TaaI	ACNGT	5 cut(s)	703, 1091, 1299, 1460, 1762
TaiI	ACGT	3 cut(s)	1234, 1255, 1596
TaqI	TCGA	9 cut(s)	209, 312, 333, 1114, 1234, 1255, 1265, 1355, 1904
TaqII	GACCGA	2 cut(s)	331, 1259
TasI	AATT	4 cut(s)	1389, 1479, 1620, 1712
TatI	WGTACW	4 cut(s)	261, 504, 804, 1603
TfiI	GAWTC	7 cut(s)	89, 206, 354, 444, 523, 943, 1278
Tru1I	TTAA	2 cut(s)	882, 1909
Tru9I	TTAA	2 cut(s)	882, 1909
TscAI	CASTG	4 cut(s)	27, 1176, 1182, 1384
TseFI	GTSAC	3 cut(s)	277, 682, 1287
TseI	GCWGC	7 cut(s)	595, 1049, 1100, 1120, 1218, 1271, 1318
Tsp45I	GTSAC	3 cut(s)	277, 682, 1287
TspDTI	ATGAA	4 cut(s)	109, 1019, 1058, 1083
TspGWI	ACGGA	2 cut(s)	546, 612
TspRI	CASTG	4 cut(s)	27, 1176, 1182, 1384
XapI	RAATTY	3 cut(s)	1389, 1479, 1712
XceI	RCATGY	3 cut(s)	439, 454, 1288
XmiI	GTMKAC	1 cut(s)	1114
XmnI	GAANNNNTTC	1 cut(s)	857
XspI	CTAG	2 cut(s)	86, 1470
ZrmI	AGTACT	1 cut(s)	263
Zsp2I	ATGCAT	2 cut(s)	78, 1004

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.