Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006492.1

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

79521 .. 83300

Gene Structure 3780 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1737 bp

atgaccgccgcagacccgagtccgatcccatggcccacgatcgggtgggtcgtgtcgtggtacgcctccaacatcggagttctcctgctgaacaagtatttgctgaccaattacgggttcaagtacccgatttttctgacgctgtgtcacatgacggcgtgtagtgttctcagctacgtggccatagcgttgatgaaggtggctcctatgcagagcgtgaggtccaaggttcagctggcgaagatcgcgggtctcagtgtcgttttttgtttttcggtggtgtgcgggaacgtgtcgttgaggtaccttccggtgtcgtttaaccaggccgttggcgccaccacgccgttttttaccgcggttttggcgtttttgatgatcaagaagagggaggagtgggttacgtacagcaccctcattccggtcgtcgccggagtcatcattgctagtgggggtgaaccaagcttccagctctttgggtttattatgtgtgttactgctacggctgccagggcattcaagtcggtgcttcaacaaattttgctttcttctgatggggaaaagctgaactccatgaacttgctgttatacatggcaccaatagctgtaatttgtttgctccctgcaacaatattgatggagaaagatgttgttgggatcacactagatcttgccagaaaagatatcaaacttatttggtacctcttgttcaattcttctctggcttattttgtgaacttgaccaatttcttggtcaccaaacacacaagcgctttgaccctccaggtattggggaatgcaaagggagctgttgctgtagttgtttcaattatgatatttaagaatcctgtttcattcatggggatgttgggctatggactcactgttgttggagtcattttgtacagcgaagccaagaagagccttcaaatcccagaaacctcagccgcccaactcgaagatctcaactccaggagtccgaaaccggctgccccatccccagaaccggccggcaaaccaccgaaccgaccaccggaagaagccaaagttcacctgcccggttcaaagctttcctcaccacctcctgccgccatactgaatcgtccgaaccggccaccagaaaatcttgataccgaaccggtagaaagaaaaaaaggaaaaaaaaggaagggaaggacctgtgcaacccaggcaagcctgcagcccaagcccaccagcaggcccagcgaagcccacgtgcaatcagctagccgccaagccgcgccgccaaagcacctgccacgtcagcatccagcaagcgcccagtcagccctgccacgtcagcatctgatctgccacgtcagctccgattgccacgttagcactagggtcaacgccggggacttttccggccgacttccggccacttttccggcaaattttccggacacttttcaggctacttttccggccaatttccggcgacttttccggatgagtaacctgaacaagttgaactttgttccactggagacaactgtcgttggataccataggtgggtcctagatgtgcgccaacatcttaaggctgatggaattctggaaaccatccaagagcctggtcagaacgtgctctcaatcgagcaagctactgcttttgaagcaaaacaagctaaggccataattctcatgacaaggcacatgaatgacgcgctccaaaatgaatacctcaatgaggaagacccaagaaagctatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002181 GO:0003674 GO:0003735 GO:0005198 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0015934 GO:0016020 GO:0019538 GO:0022613 GO:0022625 GO:0022626 GO:0032991 GO:0034641 GO:0034645 GO:0042254 GO:0042273 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0071704 GO:0071840 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_L35Ae

Protein Analysis

578

Amino Acids

63.31

Weight (kDa)

9.57

Isoelectric Point (pI)

47.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPT	PF03151	17 - 303	3.6e-47	Triose-phosphate Transporter family
UAA	PF08449	32 - 305	3.6e-18	UAA transporter family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1062, 1284
Acc36I	ACCTGC	2 cut(s)	1062, 1284
Acc65I	GGTACC	2 cut(s)	303, 699
AccB1I	GGYRCC	4 cut(s)	303, 335, 595, 699
AccB7I	CCANNNNNTGG	1 cut(s)	790
AccII	CGCG	4 cut(s)	248, 359, 1262, 1691
AccIII	TCCGGA	2 cut(s)	1423, 1470
AclWI	GGATC	2 cut(s)	19, 665
AcoI	YGGCCR	6 cut(s)	180, 1008, 1112, 1390, 1401, 1449
AcsI	RAATTY	3 cut(s)	537, 1417, 1575
AcvI	CACGTG	1 cut(s)	1237
AcyI	GRCGYC	1 cut(s)	336
AfaI	GTAC	6 cut(s)	62, 125, 305, 407, 701, 905
AfeI	AGCGCT	1 cut(s)	772
AflII	CTTAAG	1 cut(s)	1562
AflIII	ACRYGT	1 cut(s)	291
AgeI	ACCGGT	1 cut(s)	1138
AgsI	TTSAA	9 cut(s)	121, 520, 533, 712, 828, 929, 1065, 1495, 1640
AhdI	GACNNNNNGTC	1 cut(s)	144
AjiI	CACGTC	3 cut(s)	1283, 1319, 1339
AjnI	CCWGG	6 cut(s)	324, 509, 783, 971, 1188, 1597
AjuI	GAANNNNNNNTTGG	2 cut(s)	101, 133
AloI	GAACNNNNNNTCC	2 cut(s)	450, 482
Alw21I	GWGCWC	1 cut(s)	1614
Alw26I	GTCTC	2 cut(s)	257, 1505
AlwI	GGATC	2 cut(s)	19, 665
AlwNI	CAGNNNCTG	1 cut(s)	1327
Ama87I	CYCGRG	1 cut(s)	16
Aor13HI	TCCGGA	2 cut(s)	1423, 1470
Aor51HI	AGCGCT	1 cut(s)	772
ApeKI	GCWGC	3 cut(s)	506, 989, 1201
ApoI	RAATTY	3 cut(s)	537, 1417, 1575
AsiGI	ACCGGT	1 cut(s)	1138
Asp718I	GGTACC	2 cut(s)	303, 699
AspLEI	GCGC	6 cut(s)	338, 773, 1264, 1301, 1554, 1693
AspS9I	GGNCC	5 cut(s)	33, 222, 1176, 1221, 1540
AsuC2I	CCSGG	2 cut(s)	1059, 1378
AsuHPI	GGTGA	4 cut(s)	467, 748, 1043, 1068
AsuNHI	GCTAGC	1 cut(s)	1247
AvaI	CYCGRG	1 cut(s)	16
AvaII	GGWCC	3 cut(s)	222, 1176, 1540
BalI	TGGCCA	1 cut(s)	182
BanI	GGYRCC	4 cut(s)	303, 335, 595, 699
BbrPI	CACGTG	1 cut(s)	1237
BbsI	GAAGAC	1 cut(s)	1725
Bbv12I	GWGCWC	1 cut(s)	1614
BbvCI	CCTCAGC	1 cut(s)	943
BbvI	GCAGC	3 cut(s)	493, 976, 1213
BccI	CCATC	5 cut(s)	548, 631, 1003, 1565, 1595
BceAI	ACGGC	4 cut(s)	171, 314, 331, 519
BcgI	CGANNNNNNTGC	2 cut(s)	504, 538
BciT130I	CCWGG	6 cut(s)	326, 511, 785, 973, 1190, 1599
BciVI	GTATCC	1 cut(s)	1520
BclI	TGATCA	1 cut(s)	378
BcnI	CCSGG	2 cut(s)	1059, 1378
BcoDI	GTCTC	2 cut(s)	257, 1505
BfaI	CTAG	5 cut(s)	447, 665, 1248, 1365, 1544
BfmI	CTRYAG	3 cut(s)	816, 1199, 1733
BfoI	RGCGCY	3 cut(s)	339, 774, 1302
BfrI	CTTAAG	1 cut(s)	1562
BfuAI	ACCTGC	2 cut(s)	1062, 1284
BfuI	GTATCC	1 cut(s)	1520
BglII	AGATCT	2 cut(s)	667, 961
BisI	GCNGC	9 cut(s)	9, 507, 948, 990, 1089, 1202, 1252, 1260, 1265
BlsI	GCNGC	9 cut(s)	10, 508, 949, 991, 1090, 1203, 1253, 1261, 1266
Bme1390I	CCNGG	8 cut(s)	326, 511, 785, 973, 1059, 1190, 1378, 1599
Bme18I	GGWCC	3 cut(s)	222, 1176, 1540
BmeRI	GACNNNNNGTC	1 cut(s)	144
BmeT110I	CYCGRG	1 cut(s)	16
BmgBI	CACGTC	3 cut(s)	1283, 1319, 1339
BmgT120I	GGNCC	5 cut(s)	33, 222, 1176, 1221, 1540
BmiI	GGNNCC	6 cut(s)	204, 305, 337, 597, 701, 1541
BmrFI	CCNGG	8 cut(s)	326, 511, 785, 973, 1059, 1190, 1378, 1599
BmrI	ACTGGG	1 cut(s)	1297
BmsI	GCATC	2 cut(s)	1297, 1333
BmtI	GCTAGC	1 cut(s)	1251
BmuI	ACTGGG	1 cut(s)	1297
BoxI	GACNNNNGTC	2 cut(s)	18, 1517
BpiI	GAAGAC	1 cut(s)	1725
BpmI	CTGGAG	3 cut(s)	767, 955, 1529
Bpu10I	CCTNAGC	2 cut(s)	943, 1653
BpuMI	CCSGG	2 cut(s)	1059, 1378
BsaAI	YACGTR	3 cut(s)	178, 405, 1237
BsaHI	GRCGYC	1 cut(s)	336
BsaI	GGTCTC	1 cut(s)	257
BsaJI	CCNNGG	6 cut(s)	29, 225, 357, 510, 1188, 1377
BsaWI	WCCGGW	6 cut(s)	310, 421, 1033, 1138, 1423, 1470
BsaXI	ACNNNNNCTCC	2 cut(s)	1328, 1358
Bse118I	RCCGGY	5 cut(s)	985, 1006, 1010, 1110, 1138
Bse1I	ACTGG	2 cut(s)	1303, 1512
Bse3DI	GCAATG	1 cut(s)	441
BseAI	TCCGGA	2 cut(s)	1423, 1470
BseBI	CCWGG	6 cut(s)	326, 511, 785, 973, 1190, 1599
BseDI	CCNNGG	6 cut(s)	29, 225, 357, 510, 1188, 1377
BseGI	GGATG	5 cut(s)	870, 995, 1288, 1479, 1587
BseMI	GCAATG	1 cut(s)	441
BseMII	CTCAG	3 cut(s)	184, 268, 957
BseNI	ACTGG	2 cut(s)	1303, 1512
BseRI	GAGGAG	1 cut(s)	407
BseX3I	CGGCCG	2 cut(s)	1008, 1390
BseXI	GCAGC	3 cut(s)	493, 976, 1213
BseYI	CCCAGC	1 cut(s)	1223
Bsh1236I	CGCG	4 cut(s)	248, 359, 1262, 1691
Bsh1285I	CGRYCG	4 cut(s)	42, 426, 1011, 1393
BshNI	GGYRCC	4 cut(s)	303, 335, 595, 699
BshTI	ACCGGT	1 cut(s)	1138
BsiEI	CGRYCG	4 cut(s)	42, 426, 1011, 1393
BsiHKAI	GWGCWC	1 cut(s)	1614
BsiHKCI	CYCGRG	1 cut(s)	16
BslFI	GGGAC	1 cut(s)	1394
BsmAI	GTCTC	2 cut(s)	257, 1505
BsmFI	GGGAC	1 cut(s)	1394
BsmI	GAATGC	2 cut(s)	515, 802
Bso31I	GGTCTC	1 cut(s)	257
BsoBI	CYCGRG	1 cut(s)	16
Bsp1286I	GDGCHC	1 cut(s)	1614
Bsp13I	TCCGGA	2 cut(s)	1423, 1470
Bsp1407I	TGTACA	1 cut(s)	903
Bsp143I	GATC	8 cut(s)	24, 39, 243, 378, 657, 667, 961, 1329
Bsp19I	CCATGG	1 cut(s)	29
BspCNI	CTCAG	3 cut(s)	183, 267, 956
BspEI	TCCGGA	2 cut(s)	1423, 1470
BspFNI	CGCG	4 cut(s)	248, 359, 1262, 1691
BspHI	TCATGA	1 cut(s)	1668
BspLI	GGNNCC	6 cut(s)	204, 305, 337, 597, 701, 1541
BspMAI	CTGCAG	1 cut(s)	1203
BspMI	ACCTGC	2 cut(s)	1062, 1284
BspOI	GCTAGC	1 cut(s)	1251
BspPI	GGATC	2 cut(s)	19, 665
BspQI	GCTCTTC	1 cut(s)	914
BspT107I	GGYRCC	4 cut(s)	303, 335, 595, 699
BspTI	CTTAAG	1 cut(s)	1562
BspTNI	GGTCTC	1 cut(s)	257
BsrDI	GCAATG	1 cut(s)	441
BsrFI	RCCGGY	5 cut(s)	985, 1006, 1010, 1110, 1138
BsrGI	TGTACA	1 cut(s)	903
BsrI	ACTGG	2 cut(s)	1303, 1512
BssAI	RCCGGY	5 cut(s)	985, 1006, 1010, 1110, 1138
BssECI	CCNNGG	6 cut(s)	29, 225, 357, 510, 1188, 1377
BssMI	GATC	8 cut(s)	24, 39, 243, 378, 657, 667, 961, 1329
BssNI	GRCGYC	1 cut(s)	336
BssT1I	CCWWGG	2 cut(s)	29, 225
Bst2UI	CCWGG	6 cut(s)	326, 511, 785, 973, 1190, 1599
Bst4CI	ACNGT	2 cut(s)	886, 1519
Bst6I	CTCTTC	2 cut(s)	380, 914
BstACI	GRCGYC	1 cut(s)	336
BstAFI	CTTAAG	1 cut(s)	1562
BstAUI	TGTACA	1 cut(s)	903
BstBAI	YACGTR	3 cut(s)	178, 405, 1237
BstC8I	GCNNGC	8 cut(s)	237, 1012, 1195, 1199, 1220, 1249, 1297, 1626
BstDEI	CTNAG	4 cut(s)	170, 254, 943, 1653
BstDSI	CCRYGG	2 cut(s)	29, 357
BstEII	GGTNACC	1 cut(s)	754
BstENI	CCTNNNNNAGG	1 cut(s)	1712
BstF5I	GGATG	5 cut(s)	870, 995, 1288, 1479, 1587
BstFNI	CGCG	4 cut(s)	248, 359, 1262, 1691
BstH2I	RGCGCY	3 cut(s)	339, 774, 1302
BstHHI	GCGC	6 cut(s)	338, 773, 1264, 1301, 1554, 1693
BstKTI	GATC	8 cut(s)	27, 42, 246, 381, 660, 670, 964, 1332
BstMAI	GTCTC	2 cut(s)	257, 1505
BstMBI	GATC	8 cut(s)	24, 39, 243, 378, 657, 667, 961, 1329
BstMCI	CGRYCG	4 cut(s)	42, 426, 1011, 1393
BstNI	CCWGG	6 cut(s)	326, 511, 785, 973, 1190, 1599
BstPAI	GACNNNNGTC	2 cut(s)	18, 1517
BstPI	GGTNACC	1 cut(s)	754
BstSCI	CCNGG	8 cut(s)	324, 509, 783, 971, 1057, 1188, 1376, 1597
BstSFI	CTRYAG	3 cut(s)	816, 1199, 1733
BstSNI	TACGTA	1 cut(s)	405
BstUI	CGCG	4 cut(s)	248, 359, 1262, 1691
BstV1I	GCAGC	3 cut(s)	493, 976, 1213
BstV2I	GAAGAC	1 cut(s)	1725
BstX2I	RGATCY	2 cut(s)	667, 961
BstXI	CCANNNNNNTGG	4 cut(s)	332, 476, 751, 1598
BstYI	RGATCY	2 cut(s)	667, 961
BstZI	CGGCCG	2 cut(s)	1008, 1390
BsuI	GTATCC	1 cut(s)	1520
BtgI	CCRYGG	2 cut(s)	29, 357
BtrI	CACGTC	3 cut(s)	1283, 1319, 1339
BtsCI	GGATG	5 cut(s)	870, 995, 1288, 1479, 1587
BtsIMutI	CAGTG	3 cut(s)	262, 882, 1505
BveI	ACCTGC	2 cut(s)	1062, 1284
Cac8I	GCNNGC	8 cut(s)	237, 1012, 1195, 1199, 1220, 1249, 1297, 1626
CaiI	CAGNNNCTG	1 cut(s)	1327
CciI	TCATGA	1 cut(s)	1668
CfoI	GCGC	6 cut(s)	338, 773, 1264, 1301, 1554, 1693
Cfr10I	RCCGGY	5 cut(s)	985, 1006, 1010, 1110, 1138
Cfr13I	GGNCC	5 cut(s)	33, 222, 1176, 1221, 1540
Cfr42I	CCGCGG	1 cut(s)	360
CseI	GACGC	2 cut(s)	148, 1697
Csp6I	GTAC	6 cut(s)	61, 124, 304, 406, 700, 904
CspAI	ACCGGT	1 cut(s)	1138
CviAII	CATG	7 cut(s)	30, 151, 574, 592, 859, 1669, 1681
CviQI	GTAC	6 cut(s)	61, 124, 304, 406, 700, 904
DdeI	CTNAG	4 cut(s)	170, 254, 943, 1653
DinI	GGCGCC	1 cut(s)	337
DpnI	GATC	8 cut(s)	26, 41, 245, 380, 659, 669, 963, 1331
DpnII	GATC	8 cut(s)	24, 39, 243, 378, 657, 667, 961, 1329
DriI	GACNNNNNGTC	1 cut(s)	144
EaeI	YGGCCR	6 cut(s)	180, 1008, 1112, 1390, 1401, 1449
EagI	CGGCCG	2 cut(s)	1008, 1390
Eam1104I	CTCTTC	2 cut(s)	380, 914
Eam1105I	GACNNNNNGTC	1 cut(s)	144
EarI	CTCTTC	2 cut(s)	380, 914
EclXI	CGGCCG	2 cut(s)	1008, 1390
Eco105I	TACGTA	1 cut(s)	405
Eco130I	CCWWGG	2 cut(s)	29, 225
Eco31I	GGTCTC	1 cut(s)	257
Eco32I	GATATC	1 cut(s)	685
Eco47I	GGWCC	3 cut(s)	222, 1176, 1540
Eco47III	AGCGCT	1 cut(s)	772
Eco52I	CGGCCG	2 cut(s)	1008, 1390
Eco72I	CACGTG	1 cut(s)	1237
Eco88I	CYCGRG	1 cut(s)	16
Eco91I	GGTNACC	1 cut(s)	754
EcoNI	CCTNNNNNAGG	1 cut(s)	1712
EcoO109I	RGGNCCY	2 cut(s)	1176, 1540
EcoO65I	GGTNACC	1 cut(s)	754
EcoRI	GAATTC	1 cut(s)	1575
EcoRII	CCWGG	6 cut(s)	324, 509, 783, 971, 1188, 1597
EcoRV	GATATC	1 cut(s)	685
EcoT14I	CCWWGG	2 cut(s)	29, 225
EgeI	GGCGCC	1 cut(s)	337
EheI	GGCGCC	1 cut(s)	337
ErhI	CCWWGG	2 cut(s)	29, 225
FaeI	CATG	7 cut(s)	33, 154, 577, 595, 862, 1672, 1684
FalI	AAGNNNNNCTT	2 cut(s)	1481, 1513
FaqI	GGGAC	1 cut(s)	1394
FatI	CATG	7 cut(s)	29, 150, 573, 591, 858, 1668, 1680
FauI	CCCGC	2 cut(s)	241, 278
FbaI	TGATCA	1 cut(s)	378
Fnu4HI	GCNGC	9 cut(s)	9, 507, 948, 990, 1089, 1202, 1252, 1260, 1265
FokI	GGATG	5 cut(s)	877, 982, 1275, 1486, 1574
Fsp4HI	GCNGC	9 cut(s)	9, 507, 948, 990, 1089, 1202, 1252, 1260, 1265
FspBI	CTAG	5 cut(s)	447, 665, 1248, 1365, 1544
GlaI	GCGC	6 cut(s)	337, 772, 1263, 1300, 1553, 1692
GluI	GCNGC	9 cut(s)	9, 507, 948, 990, 1089, 1202, 1252, 1260, 1265
GsaI	CCCAGC	1 cut(s)	1227
GsuI	CTGGAG	3 cut(s)	767, 955, 1529
HaeII	RGCGCY	3 cut(s)	339, 774, 1302
HgaI	GACGC	2 cut(s)	148, 1697
HhaI	GCGC	6 cut(s)	338, 773, 1264, 1301, 1554, 1693
Hin1I	GRCGYC	1 cut(s)	336
Hin1II	CATG	7 cut(s)	33, 154, 577, 595, 862, 1672, 1684
Hin6I	GCGC	6 cut(s)	336, 771, 1262, 1299, 1552, 1691
HinP1I	GCGC	6 cut(s)	336, 771, 1262, 1299, 1552, 1691
HincII	GTYRAC	1 cut(s)	1372
HindII	GTYRAC	1 cut(s)	1372
HindIII	AAGCTT	2 cut(s)	463, 1067
HinfI	GANTC	7 cut(s)	19, 435, 844, 879, 894, 976, 1099
HphI	GGTGA	4 cut(s)	467, 748, 1043, 1068
Hpy166II	GTNNAC	4 cut(s)	458, 736, 1051, 1372
Hpy188I	TCNGA	9 cut(s)	24, 77, 138, 553, 981, 1107, 1329, 1348, 1605
Hpy188III	TCNNGA	6 cut(s)	382, 1127, 1424, 1471, 1580, 1669
Hpy8I	GTNNAC	4 cut(s)	458, 736, 1051, 1372
Hpy99I	CGWCG	1 cut(s)	431
HpyAV	CCTTC	5 cut(s)	190, 317, 935, 1162, 1167
HpyCH4III	ACNGT	2 cut(s)	886, 1519
HpyCH4IV	ACGT	9 cut(s)	177, 291, 404, 1236, 1282, 1318, 1338, 1356, 1608
HpyCH4V	TGCA	6 cut(s)	211, 626, 800, 1184, 1201, 1240
HpyF3I	CTNAG	4 cut(s)	170, 254, 943, 1653
HpySE526I	ACGT	9 cut(s)	177, 291, 404, 1236, 1282, 1318, 1338, 1356, 1608
Hsp92I	GRCGYC	1 cut(s)	336
Hsp92II	CATG	7 cut(s)	33, 154, 577, 595, 862, 1672, 1684
HspAI	GCGC	6 cut(s)	336, 771, 1262, 1299, 1552, 1691
KasI	GGCGCC	1 cut(s)	335
Kpn2I	TCCGGA	2 cut(s)	1423, 1470
KpnI	GGTACC	2 cut(s)	307, 703
KroI	GCCGGC	1 cut(s)	1010
KroNI	GCCGGC	1 cut(s)	1012
Ksp22I	TGATCA	1 cut(s)	378
KspI	CCGCGG	1 cut(s)	360
Kzo9I	GATC	8 cut(s)	24, 39, 243, 378, 657, 667, 961, 1329
LguI	GCTCTTC	1 cut(s)	914
LmnI	GCTCC	5 cut(s)	208, 624, 806, 1349, 1698
Lsp1109I	GCAGC	3 cut(s)	493, 976, 1213
LweI	GCATC	2 cut(s)	1297, 1333
MaeI	CTAG	5 cut(s)	447, 665, 1248, 1365, 1544
MaeII	ACGT	9 cut(s)	177, 291, 404, 1236, 1282, 1318, 1338, 1356, 1608
MaeIII	GTNAC	5 cut(s)	146, 400, 493, 754, 1478
MalI	GATC	8 cut(s)	26, 41, 245, 380, 659, 669, 963, 1331
MboI	GATC	8 cut(s)	24, 39, 243, 378, 657, 667, 961, 1329
MboII	GAAGA	8 cut(s)	253, 397, 540, 708, 931, 971, 1049, 1730
MflI	RGATCY	2 cut(s)	667, 961
MhlI	GDGCHC	1 cut(s)	1614
MlsI	TGGCCA	1 cut(s)	182
MluNI	TGGCCA	1 cut(s)	182
Mly113I	GGCGCC	1 cut(s)	336
MlyI	GAGTC	5 cut(s)	28, 444, 873, 903, 985
MmeI	TCCRAC	3 cut(s)	93, 871, 1504
Mox20I	TGGCCA	1 cut(s)	182
MroI	TCCGGA	2 cut(s)	1423, 1470
MroNI	GCCGGC	1 cut(s)	1010
MscI	TGGCCA	1 cut(s)	182
MseI	TTAA	3 cut(s)	321, 840, 1563
MslI	CAYNNNNRTG	2 cut(s)	863, 1683
Msp20I	TGGCCA	1 cut(s)	182
MspA1I	CMGCKG	2 cut(s)	235, 359
MspCI	CTTAAG	1 cut(s)	1562
MspR9I	CCNGG	8 cut(s)	326, 511, 785, 973, 1059, 1190, 1378, 1599
Mva1269I	GAATGC	2 cut(s)	515, 802
MvaI	CCWGG	6 cut(s)	326, 511, 785, 973, 1190, 1599
MvnI	CGCG	4 cut(s)	248, 359, 1262, 1691
NaeI	GCCGGC	1 cut(s)	1012
NarI	GGCGCC	1 cut(s)	336
NciI	CCSGG	2 cut(s)	1059, 1378
NcoI	CCATGG	1 cut(s)	29
NdeII	GATC	8 cut(s)	24, 39, 243, 378, 657, 667, 961, 1329
NgoMIV	GCCGGC	1 cut(s)	1010
NheI	GCTAGC	1 cut(s)	1247
NlaIII	CATG	7 cut(s)	33, 154, 577, 595, 862, 1672, 1684
NlaIV	GGNNCC	6 cut(s)	204, 305, 337, 597, 701, 1541
NmuCI	GTSAC	2 cut(s)	146, 754
PagI	TCATGA	1 cut(s)	1668
PaqCI	CACCTGC	2 cut(s)	1062, 1284
PciSI	GCTCTTC	1 cut(s)	914
PcsI	WCGNNNNNNNCGW	2 cut(s)	48, 1344
PctI	GAATGC	2 cut(s)	515, 802
PdiI	GCCGGC	1 cut(s)	1012
PfeI	GAWTC	2 cut(s)	844, 1099
PflMI	CCANNNNNTGG	1 cut(s)	790
PfoI	TCCNGGA	1 cut(s)	971
PinAI	ACCGGT	1 cut(s)	1138
PkrI	GCNGC	9 cut(s)	10, 508, 949, 991, 1090, 1203, 1253, 1261, 1266
Ple19I	CGATCG	1 cut(s)	42
PleI	GAGTC	5 cut(s)	27, 443, 873, 902, 984
PluTI	GGCGCC	1 cut(s)	339
PmaCI	CACGTG	1 cut(s)	1237
PmlI	CACGTG	1 cut(s)	1237
PpsI	GAGTC	5 cut(s)	27, 443, 873, 902, 984
Ppu21I	YACGTR	3 cut(s)	178, 405, 1237
PpuMI	RGGWCCY	2 cut(s)	1176, 1540
PshAI	GACNNNNGTC	2 cut(s)	18, 1517
Psp5II	RGGWCCY	2 cut(s)	1176, 1540
Psp6I	CCWGG	6 cut(s)	324, 509, 783, 971, 1188, 1597
PspCI	CACGTG	1 cut(s)	1237
PspEI	GGTNACC	1 cut(s)	754
PspFI	CCCAGC	1 cut(s)	1223
PspGI	CCWGG	6 cut(s)	324, 509, 783, 971, 1188, 1597
PspN4I	GGNNCC	6 cut(s)	204, 305, 337, 597, 701, 1541
PspPI	GGNCC	5 cut(s)	33, 222, 1176, 1221, 1540
PspPPI	RGGWCCY	2 cut(s)	1176, 1540
PsrI	GAACNNNNNNTAC	2 cut(s)	692, 724
PstI	CTGCAG	1 cut(s)	1203
PstNI	CAGNNNCTG	1 cut(s)	1327
PsuI	RGATCY	2 cut(s)	667, 961
PvuI	CGATCG	1 cut(s)	42
PvuII	CAGCTG	1 cut(s)	235
RsaI	GTAC	6 cut(s)	62, 125, 305, 407, 701, 905
RsaNI	GTAC	6 cut(s)	61, 124, 304, 406, 700, 904
RseI	CAYNNNNRTG	2 cut(s)	863, 1683
SacII	CCGCGG	1 cut(s)	360
SapI	GCTCTTC	1 cut(s)	914
SaqAI	TTAA	3 cut(s)	321, 840, 1563
SatI	GCNGC	9 cut(s)	9, 507, 948, 990, 1089, 1202, 1252, 1260, 1265
Sau3AI	GATC	8 cut(s)	24, 39, 243, 378, 657, 667, 961, 1329
Sau96I	GGNCC	5 cut(s)	33, 222, 1176, 1221, 1540
SchI	GAGTC	5 cut(s)	28, 444, 873, 903, 985
ScrFI	CCNGG	8 cut(s)	326, 511, 785, 973, 1059, 1190, 1378, 1599
SduI	GDGCHC	1 cut(s)	1614
SfaNI	GCATC	2 cut(s)	1297, 1333
SfcI	CTRYAG	3 cut(s)	816, 1199, 1733
SfoI	GGCGCC	1 cut(s)	337
Sfr303I	CCGCGG	1 cut(s)	360
SgrBI	CCGCGG	1 cut(s)	360
SinI	GGWCC	3 cut(s)	222, 1176, 1540
SmiMI	CAYNNNNRTG	2 cut(s)	863, 1683
SmlI	CTYRAG	1 cut(s)	1562
SmoI	CTYRAG	1 cut(s)	1562
SnaBI	TACGTA	1 cut(s)	405
SspDI	GGCGCC	1 cut(s)	335
SspI	AATATT	1 cut(s)	633
SspMI	CTAG	5 cut(s)	447, 665, 1248, 1365, 1544
StyD4I	CCNGG	8 cut(s)	324, 509, 783, 971, 1057, 1188, 1376, 1597
StyI	CCWWGG	2 cut(s)	29, 225
TaaI	ACNGT	2 cut(s)	886, 1519
TaiI	ACGT	9 cut(s)	180, 294, 407, 1239, 1285, 1321, 1341, 1359, 1611
TaqI	TCGA	2 cut(s)	957, 1620
TatI	WGTACW	1 cut(s)	903
TauI	GCSGC	6 cut(s)	11, 950, 1091, 1254, 1262, 1267
TfiI	GAWTC	2 cut(s)	844, 1099
Tru1I	TTAA	3 cut(s)	321, 840, 1563
Tru9I	TTAA	3 cut(s)	321, 840, 1563
TscAI	CASTG	3 cut(s)	262, 889, 1512
TseFI	GTSAC	2 cut(s)	146, 754
TseI	GCWGC	3 cut(s)	506, 989, 1201
Tsp45I	GTSAC	2 cut(s)	146, 754
TspDTI	ATGAA	6 cut(s)	209, 590, 843, 847, 1697, 1716
TspRI	CASTG	3 cut(s)	262, 889, 1512
Van91I	CCANNNNNTGG	1 cut(s)	790
Vha464I	CTTAAG	1 cut(s)	1562
VpaK11BI	GGWCC	3 cut(s)	222, 1176, 1540
XagI	CCTNNNNNAGG	1 cut(s)	1712
XapI	RAATTY	3 cut(s)	537, 1417, 1575
XcmI	CCANNNNNNNNNTGG	1 cut(s)	232
XspI	CTAG	5 cut(s)	447, 665, 1248, 1365, 1544

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.