Rmu_sc0006774.1_g000015

salicylic acid-binding protein 2-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006774.1
N/A
Physical Location & Seq
Reverse (-)
56155 .. 60867
4713 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1191 bp
ctgttgcttccactgaccttctgtccggcggccgaccggtccaccataacatcagatcctacagaaaaatccgagcagaaaccaccaaaggatcgagcaatcccttacaacagtactctccctacacagctggccggaaacaaagagagcggcctcaaaattcggcctccaacagcaatcaaagacctccgagatctggtccacccacagcccaaaaccgttgccaaaaacccagccacgaatgccgactccttcgccctccgaaacgcgagcttagaaaccaacagtgaggccgactctactcgaggtggagagagacttccgtcgttgctggtcttgaactctagggttcgctgggtagagagagaaaatggaagagagagaaaccataggagacttcgccggagcccgatcacctgtcgccggaatccggtcatcggtctctggattccagccaactttcgccagaatccggtcaccagtcactggattcaggtcaactttcaccggaatctggtcgccggattccgatcacaggctgccgcccatccgacttttttgaaaatctcaccagaggtctccaaagaggtcgtcggagatctcgtaggagacggaggcgctgatcgagccggtgatgatgacaaagaaggtggcgatgtagattcaagcaaagggaggagatgcaggaggccgtcggtatcgacttttggccatggagcttggtgttggtacaaaatcaagccaacgctggagtccgccggtcacaaggtcacggccctcaataatgcggcttcaggcatcgacaccaagtccctagaagatgttcattcactagaagagtactctgagcctttgcttcagtttatcggatcacttggtccacaagaaaaggtgatccttgtaggtcacagccttgggggcatgaacttggctgttgccatggagaagttccctgagaaaatttctgctgctgttttcctggctgcttttctgccagataccacccactacccatgtgcggacgtccgcaccggagaagcgctgataaccaaggaatttcagcattggatgattcaaaatagtggggttaaagatgtggtggagatcaagggagctgatcatatgccaatgttttcaaagccacaagaactttccaattctcttctagagatagcacagaagtacacttaa

Protein Analysis

396

Amino Acids

43.63

Weight (kDa)

8.86

Isoelectric Point (pI)

43.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_1 PF00561 236 - 333 6.1e-15 alpha/beta hydrolase fold
Abhydrolase_6 PF12697 236 - 334 1.1e-07 Alpha/beta hydrolase family
Hydrolase_4 PF12146 249 - 342 5.2e-06 Serine aminopeptidase, S33
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1026
AccB7I CCANNNNNTGG 1 cut(s) 486
AccBSI CCGCTC 1 cut(s) 150
AccII CGCG 1 cut(s) 269
AciI CCGC 7 cut(s) 29, 150, 543, 756, 788, 1019, 1027
AclWI GGATC 4 cut(s) 50, 99, 877, 889
AcoI YGGCCR 3 cut(s) 30, 132, 709
AcsI RAATTY 3 cut(s) 159, 960, 1055
AcuI CTGAAG 2 cut(s) 777, 842
AcyI GRCGYC 1 cut(s) 1023
AfaI GTAC 4 cut(s) 115, 731, 842, 1184
AfeI AGCGCT 1 cut(s) 1041
AfiI CCNNNNNNNGG 9 cut(s) 196, 423, 430, 437, 472, 486, 514, 535, 1018
AgeI ACCGGT 1 cut(s) 36
AgsI TTSAA 5 cut(s) 340, 562, 666, 1076, 1137
AhdI GACNNNNNGTC 2 cut(s) 21, 808
AjnI CCWGG 1 cut(s) 978
AluBI AGCT 4 cut(s) 130, 273, 719, 1115
AluI AGCT 4 cut(s) 130, 273, 719, 1115
Alw26I GTCTC 5 cut(s) 310, 388, 446, 583, 603
AlwI GGATC 4 cut(s) 50, 99, 877, 889
AlwNI CAGNNNCTG 1 cut(s) 486
Ama87I CYCGRG 1 cut(s) 303
Aor51HI AGCGCT 1 cut(s) 1041
AoxI GGCC 8 cut(s) 30, 132, 151, 164, 291, 689, 709, 774
ApeKI GCWGC 3 cut(s) 539, 968, 983
ApoI RAATTY 3 cut(s) 159, 960, 1055
ArsI GACNNNNNNTTYG 2 cut(s) 576, 608
AsiGI ACCGGT 1 cut(s) 36
Asp700I GAANNNNTTC 1 cut(s) 822
AspLEI GCGC 2 cut(s) 620, 1042
AspS9I GGNCC 4 cut(s) 39, 199, 775, 878
AsuHPI GGTGA 6 cut(s) 406, 469, 497, 561, 644, 904
AvaI CYCGRG 1 cut(s) 303
AvaII GGWCC 3 cut(s) 39, 199, 878
BalI TGGCCA 1 cut(s) 711
BanII GRGCYC 1 cut(s) 410
BbvI GCAGC 3 cut(s) 526, 955, 970
BccI CCATC 1 cut(s) 555
BceAI ACGGC 2 cut(s) 676, 789
BciT130I CCWGG 1 cut(s) 980
BclI TGATCA 1 cut(s) 1117
BcoDI GTCTC 5 cut(s) 310, 388, 446, 583, 603
BfaI CTAG 4 cut(s) 345, 815, 833, 1166
BfmI CTRYAG 1 cut(s) 60
BfoI RGCGCY 2 cut(s) 621, 1043
BglI GCCNNNNNGGC 1 cut(s) 918
BglII AGATCT 2 cut(s) 193, 598
BisI GCNGC 7 cut(s) 30, 151, 540, 543, 789, 969, 984
BlsI GCNGC 7 cut(s) 31, 152, 541, 544, 790, 970, 985
BmcAI AGTACT 2 cut(s) 115, 842
Bme1390I CCNGG 1 cut(s) 980
Bme18I GGWCC 3 cut(s) 39, 199, 878
BmeRI GACNNNNNGTC 2 cut(s) 21, 808
BmeT110I CYCGRG 1 cut(s) 303
BmgT120I GGNCC 4 cut(s) 39, 199, 775, 878
BmiI GGNNCC 1 cut(s) 407
BmrFI CCNGG 1 cut(s) 980
BmsI GCATC 2 cut(s) 671, 807
BoxI GACNNNNGTC 1 cut(s) 322
BplI GAGNNNNNCTC 2 cut(s) 281, 313
BpmI CTGGAG 1 cut(s) 770
BsaBI GATNNNNATC 1 cut(s) 529
BsaHI GRCGYC 1 cut(s) 1023
BsaI GGTCTC 2 cut(s) 446, 583
BsaJI CCNNGG 4 cut(s) 712, 913, 939, 1050
BsaWI WCCGGW 5 cut(s) 36, 430, 472, 507, 1031
BsaXI ACNNNNNCTCC 2 cut(s) 588, 618
Bsc4I CCNNNNNNNGG 9 cut(s) 196, 423, 430, 437, 472, 486, 514, 535, 1018
Bse118I RCCGGY 3 cut(s) 36, 629, 758
Bse1I ACTGG 2 cut(s) 480, 491
Bse8I GATNNNNATC 1 cut(s) 529
BseBI CCWGG 1 cut(s) 980
BseDI CCNNGG 4 cut(s) 712, 913, 939, 1050
BseGI GGATG 2 cut(s) 547, 1074
BseJI GATNNNNATC 1 cut(s) 529
BseLI CCNNNNNNNGG 9 cut(s) 196, 423, 430, 437, 472, 486, 514, 535, 1018
BseMII CTCAG 2 cut(s) 837, 945
BseNI ACTGG 2 cut(s) 480, 491
BseRI GAGGAG 1 cut(s) 691
BseX3I CGGCCG 1 cut(s) 30
BseXI GCAGC 3 cut(s) 526, 955, 970
BseYI CCCAGC 2 cut(s) 232, 354
Bsh1236I CGCG 1 cut(s) 269
Bsh1285I CGRYCG 2 cut(s) 33, 37
BshFI GGCC 8 cut(s) 32, 134, 153, 166, 293, 691, 711, 776
BshTI ACCGGT 1 cut(s) 36
BsiEI CGRYCG 2 cut(s) 33, 37
BsiHKCI CYCGRG 1 cut(s) 303
BslFI GGGAC 1 cut(s) 796
BslI CCNNNNNNNGG 9 cut(s) 196, 423, 430, 437, 472, 486, 514, 535, 1018
BsmAI GTCTC 5 cut(s) 310, 388, 446, 583, 603
BsmBI CGTCTC 1 cut(s) 603
BsmFI GGGAC 1 cut(s) 796
BsmI GAATGC 1 cut(s) 247
BsnI GGCC 8 cut(s) 32, 134, 153, 166, 293, 691, 711, 776
Bso31I GGTCTC 2 cut(s) 446, 583
BsoBI CYCGRG 1 cut(s) 303
Bsp1286I GDGCHC 1 cut(s) 410
Bsp19I CCATGG 2 cut(s) 712, 939
BspACI CCGC 7 cut(s) 29, 150, 543, 756, 788, 1019, 1027
BspANI GGCC 8 cut(s) 32, 134, 153, 166, 293, 691, 711, 776
BspCNI CTCAG 2 cut(s) 838, 946
BspFNI CGCG 1 cut(s) 269
BspLI GGNNCC 1 cut(s) 407
BspPI GGATC 4 cut(s) 50, 99, 877, 889
BspTNI GGTCTC 2 cut(s) 446, 583
BsrBI CCGCTC 1 cut(s) 150
BsrFI RCCGGY 3 cut(s) 36, 629, 758
BsrI ACTGG 2 cut(s) 480, 491
BssAI RCCGGY 3 cut(s) 36, 629, 758
BssECI CCNNGG 4 cut(s) 712, 913, 939, 1050
BssNI GRCGYC 1 cut(s) 1023
BssT1I CCWWGG 4 cut(s) 712, 913, 939, 1050
Bst2UI CCWGG 1 cut(s) 980
Bst4CI ACNGT 3 cut(s) 113, 220, 287
Bst6I CTCTTC 3 cut(s) 370, 831, 1167
BstACI GRCGYC 1 cut(s) 1023
BstC8I GCNNGC 2 cut(s) 132, 271
BstDEI CTNAG 3 cut(s) 274, 846, 954
BstDSI CCRYGG 2 cut(s) 712, 939
BstEII GGTNACC 1 cut(s) 475
BstF5I GGATG 2 cut(s) 547, 1074
BstFNI CGCG 1 cut(s) 269
BstH2I RGCGCY 2 cut(s) 621, 1043
BstHHI GCGC 2 cut(s) 620, 1042
BstMAI GTCTC 5 cut(s) 310, 388, 446, 583, 603
BstMCI CGRYCG 2 cut(s) 33, 37
BstMWI GCNNNNNNNGC 3 cut(s) 242, 626, 918
BstNI CCWGG 1 cut(s) 980
BstPAI GACNNNNGTC 1 cut(s) 322
BstPI GGTNACC 1 cut(s) 475
BstSCI CCNGG 1 cut(s) 978
BstSFI CTRYAG 1 cut(s) 60
BstUI CGCG 1 cut(s) 269
BstV1I GCAGC 3 cut(s) 526, 955, 970
BstX2I RGATCY 3 cut(s) 55, 193, 598
BstYI RGATCY 3 cut(s) 55, 193, 598
BstZI CGGCCG 1 cut(s) 30
BsuRI GGCC 8 cut(s) 32, 134, 153, 166, 293, 691, 711, 776
BtgI CCRYGG 2 cut(s) 712, 939
BtgZI GCGATG 1 cut(s) 669
BtsCI GGATG 2 cut(s) 547, 1074
BtsIMutI CAGTG 3 cut(s) 11, 292, 484
Cac8I GCNNGC 2 cut(s) 132, 271
CaiI CAGNNNCTG 1 cut(s) 486
CfoI GCGC 2 cut(s) 620, 1042
Cfr10I RCCGGY 3 cut(s) 36, 629, 758
Cfr13I GGNCC 4 cut(s) 39, 199, 775, 878
Csp6I GTAC 4 cut(s) 114, 730, 841, 1183
CspAI ACCGGT 1 cut(s) 36
CspCI CAANNNNNGTGG 2 cut(s) 631, 666
CviAII CATG 4 cut(s) 713, 922, 940, 1014
CviQI GTAC 4 cut(s) 114, 730, 841, 1183
DdeI CTNAG 3 cut(s) 274, 846, 954
DriI GACNNNNNGTC 2 cut(s) 21, 808
EaeI YGGCCR 3 cut(s) 30, 132, 709
EagI CGGCCG 1 cut(s) 30
Eam1104I CTCTTC 3 cut(s) 370, 831, 1167
Eam1105I GACNNNNNGTC 2 cut(s) 21, 808
EarI CTCTTC 3 cut(s) 370, 831, 1167
EciI GGCGGA 1 cut(s) 745
EclXI CGGCCG 1 cut(s) 30
Eco130I CCWWGG 4 cut(s) 712, 913, 939, 1050
Eco24I GRGCYC 1 cut(s) 410
Eco31I GGTCTC 2 cut(s) 446, 583
Eco47I GGWCC 3 cut(s) 39, 199, 878
Eco47III AGCGCT 1 cut(s) 1041
Eco52I CGGCCG 1 cut(s) 30
Eco57I CTGAAG 2 cut(s) 777, 842
Eco88I CYCGRG 1 cut(s) 303
Eco91I GGTNACC 1 cut(s) 475
EcoO65I GGTNACC 1 cut(s) 475
EcoRII CCWGG 1 cut(s) 978
EcoT14I CCWWGG 4 cut(s) 712, 913, 939, 1050
EcoT38I GRGCYC 1 cut(s) 410
ErhI CCWWGG 4 cut(s) 712, 913, 939, 1050
Esp3I CGTCTC 1 cut(s) 603
FaeI CATG 4 cut(s) 716, 925, 943, 1017
FaiI YATR 8 cut(s) 47, 390, 714, 923, 941, 1015, 1122, 1124
FaqI GGGAC 1 cut(s) 796
FatI CATG 4 cut(s) 712, 921, 939, 1013
FauNDI CATATG 1 cut(s) 1122
FbaI TGATCA 1 cut(s) 1117
Fnu4HI GCNGC 7 cut(s) 30, 151, 540, 543, 789, 969, 984
FokI GGATG 2 cut(s) 534, 1081
FriOI GRGCYC 1 cut(s) 410
Fsp4HI GCNGC 7 cut(s) 30, 151, 540, 543, 789, 969, 984
FspBI CTAG 4 cut(s) 345, 815, 833, 1166
GlaI GCGC 2 cut(s) 619, 1041
GluI GCNGC 7 cut(s) 30, 151, 540, 543, 789, 969, 984
GsaI CCCAGC 2 cut(s) 236, 358
GsuI CTGGAG 1 cut(s) 770
HaeII RGCGCY 2 cut(s) 621, 1043
HaeIII GGCC 8 cut(s) 32, 134, 153, 166, 293, 691, 711, 776
HhaI GCGC 2 cut(s) 620, 1042
Hin1I GRCGYC 1 cut(s) 1023
Hin1II CATG 4 cut(s) 716, 925, 943, 1017
Hin6I GCGC 2 cut(s) 618, 1040
HinP1I GCGC 2 cut(s) 618, 1040
HincII GTYRAC 1 cut(s) 499
HindII GTYRAC 1 cut(s) 499
HphI GGTGA 6 cut(s) 406, 469, 497, 561, 644, 904
Hpy166II GTNNAC 5 cut(s) 42, 202, 499, 881, 1185
Hpy188I TCNGA 9 cut(s) 55, 73, 191, 263, 530, 552, 596, 847, 869
Hpy188III TCNNGA 3 cut(s) 337, 445, 1166
Hpy8I GTNNAC 5 cut(s) 42, 202, 499, 881, 1185
Hpy99I CGWCG 3 cut(s) 328, 596, 697
HpyAV CCTTC 3 cut(s) 28, 262, 641
HpyCH4III ACNGT 3 cut(s) 113, 220, 287
HpyCH4IV ACGT 1 cut(s) 1023
HpyCH4V TGCA 1 cut(s) 684
HpyF10VI GCNNNNNNNGC 3 cut(s) 242, 626, 918
HpyF3I CTNAG 3 cut(s) 274, 846, 954
HpySE526I ACGT 1 cut(s) 1023
Hsp92I GRCGYC 1 cut(s) 1023
Hsp92II CATG 4 cut(s) 716, 925, 943, 1017
HspAI GCGC 2 cut(s) 618, 1040
Ksp22I TGATCA 1 cut(s) 1117
LmnI GCTCC 3 cut(s) 405, 716, 1112
Lsp1109I GCAGC 3 cut(s) 526, 955, 970
LweI GCATC 2 cut(s) 671, 807
MaeI CTAG 4 cut(s) 345, 815, 833, 1166
MaeII ACGT 1 cut(s) 1023
MaeIII GTNAC 5 cut(s) 475, 482, 761, 769, 905
MbiI CCGCTC 1 cut(s) 150
MboII GAAGA 4 cut(s) 387, 830, 848, 1154
MflI RGATCY 3 cut(s) 55, 193, 598
MhlI GDGCHC 1 cut(s) 410
MlsI TGGCCA 1 cut(s) 711
MluCI AATT 4 cut(s) 159, 960, 1055, 1156
MluNI TGGCCA 1 cut(s) 711
MlyI GAGTC 3 cut(s) 242, 290, 761
MmeI TCCRAC 3 cut(s) 194, 574, 575
Mox20I TGGCCA 1 cut(s) 711
MroXI GAANNNNTTC 1 cut(s) 822
MscI TGGCCA 1 cut(s) 711
MseI TTAA 2 cut(s) 1089, 1189
Msp20I TGGCCA 1 cut(s) 711
MspA1I CMGCKG 1 cut(s) 130
MspR9I CCNGG 1 cut(s) 980
Mva1269I GAATGC 1 cut(s) 247
MvaI CCWGG 1 cut(s) 980
MvnI CGCG 1 cut(s) 269
MwoI GCNNNNNNNGC 3 cut(s) 242, 626, 918
NcoI CCATGG 2 cut(s) 712, 939
NdeI CATATG 1 cut(s) 1122
NlaIII CATG 4 cut(s) 716, 925, 943, 1017
NlaIV GGNNCC 1 cut(s) 407
NmuCI GTSAC 5 cut(s) 475, 482, 761, 769, 905
PaeR7I CTCGAG 1 cut(s) 303
PcsI WCGNNNNNNNCGW 1 cut(s) 600
PctI GAATGC 1 cut(s) 247
PdmI GAANNNNTTC 1 cut(s) 822
PfeI GAWTC 8 cut(s) 427, 448, 469, 490, 511, 525, 662, 1072
PflMI CCANNNNNTGG 1 cut(s) 486
PinAI ACCGGT 1 cut(s) 36
PkrI GCNGC 7 cut(s) 31, 152, 541, 544, 790, 970, 985
PleI GAGTC 3 cut(s) 242, 290, 760
PpsI GAGTC 3 cut(s) 242, 290, 760
PshAI GACNNNNGTC 1 cut(s) 322
Psp6I CCWGG 1 cut(s) 978
PspEI GGTNACC 1 cut(s) 475
PspFI CCCAGC 2 cut(s) 232, 354
PspGI CCWGG 1 cut(s) 978
PspN4I GGNNCC 1 cut(s) 407
PspPI GGNCC 4 cut(s) 39, 199, 775, 878
PspXI VCTCGAGB 1 cut(s) 303
PstNI CAGNNNCTG 1 cut(s) 486
PsuI RGATCY 3 cut(s) 55, 193, 598
PvuII CAGCTG 1 cut(s) 130
RsaI GTAC 4 cut(s) 115, 731, 842, 1184
RsaNI GTAC 4 cut(s) 114, 730, 841, 1183
SaqAI TTAA 2 cut(s) 1089, 1189
SatI GCNGC 7 cut(s) 30, 151, 540, 543, 789, 969, 984
Sau96I GGNCC 4 cut(s) 39, 199, 775, 878
ScaI AGTACT 2 cut(s) 115, 842
SchI GAGTC 3 cut(s) 242, 290, 761
ScrFI CCNGG 1 cut(s) 980
SduI GDGCHC 1 cut(s) 410
SfaNI GCATC 2 cut(s) 671, 807
SfcI CTRYAG 1 cut(s) 60
Sfr274I CTCGAG 1 cut(s) 303
SinI GGWCC 3 cut(s) 39, 199, 878
SlaI CTCGAG 1 cut(s) 303
SmlI CTYRAG 1 cut(s) 303
SmoI CTYRAG 1 cut(s) 303
Sse9I AATT 4 cut(s) 159, 960, 1055, 1156
SsiI CCGC 7 cut(s) 29, 150, 543, 756, 788, 1019, 1027
SspMI CTAG 4 cut(s) 345, 815, 833, 1166
StyD4I CCNGG 1 cut(s) 978
StyI CCWWGG 4 cut(s) 712, 913, 939, 1050
TaaI ACNGT 3 cut(s) 113, 220, 287
TaiI ACGT 1 cut(s) 1026
TaqI TCGA 5 cut(s) 94, 304, 625, 701, 801
TaqII GACCGA 1 cut(s) 428
TasI AATT 4 cut(s) 159, 960, 1055, 1156
TatI WGTACW 3 cut(s) 113, 840, 1182
TauI GCSGC 4 cut(s) 32, 153, 545, 791
TfiI GAWTC 8 cut(s) 427, 448, 469, 490, 511, 525, 662, 1072
Tru1I TTAA 2 cut(s) 1089, 1189
Tru9I TTAA 2 cut(s) 1089, 1189
TscAI CASTG 3 cut(s) 18, 292, 491
TseFI GTSAC 5 cut(s) 475, 482, 761, 769, 905
TseI GCWGC 3 cut(s) 539, 968, 983
Tsp45I GTSAC 5 cut(s) 475, 482, 761, 769, 905
TspDTI ATGAA 2 cut(s) 815, 938
TspGWI ACGGA 2 cut(s) 312, 627
TspRI CASTG 3 cut(s) 18, 292, 491
Van91I CCANNNNNTGG 1 cut(s) 486
VpaK11BI GGWCC 3 cut(s) 39, 199, 878
XapI RAATTY 3 cut(s) 159, 960, 1055
XbaI TCTAGA 1 cut(s) 1165
XhoI CTCGAG 1 cut(s) 303
XmnI GAANNNNTTC 1 cut(s) 822
XspI CTAG 4 cut(s) 345, 815, 833, 1166
ZraI GACGTC 1 cut(s) 1024
ZrmI AGTACT 2 cut(s) 115, 842
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.