Rmu_sc0006790.1_g000007

Ankyrin repeat-containing protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006790.1
N/A
Physical Location & Seq
Forward (+)
52747 .. 55642
2896 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1830 bp
atggtggtgacacctgtcaccaactatgtcaaagccatcccttggagtgtcagcaagcagaaggtggaggaagcccaacatcaggtgaaggaagtccgagaagagactatcgaagcccaacatcaggtgaaggaagtccgagacgagactatcggcttcacccaacaagtgaaggaagtccgagaagagactatcgaagcccaacatcaggtgaaggaagtccgagaagagactatcgaagcccaacatcaggtgaaggaagtccgagaagagactatcgaagcccaacatcaggtgaaggaagtccgagaagagactatcgaagcccaacatcaggtgaaggaagtccgagaagagactatcgaagcccaacatcaggtgaaggaagtccgagaagagactatcgaagcccaacatcaggtgaaggaagtccgagaagagactatcgaagcccaacatcaggtgaaggaagtccgagaagagactatcgaagcccaacatcaggtgaaggaagtccgagaagagactatcgaagcccaacatcaggtgaaggaagtccgagaagagactatcgaagcccaacatcaggtgaaggaagtccgagaagagactatcgaagcccaacatcaggtgaaggaagtccgagaagagactatcgaagcccaacatcaggtgaaggaagtccgagaagagactatcgaagcccaacatcaggtgaaggaagtccgagacgagactatcagcatcacccaacaaggagctcaacatcaggtggaggaagcccaacatcaggtgaaggaagtccgagacgagactatcagcttcacccaacaaggagctcaacatcaggtggaggaagcccaacatcaggtgaaggaagtccgagacgagaatatcaacttcacccaacaaggagctcaacgtcaggtggaggaagcccgacgtgaggccatcagttccacccaagaaaggagcttggaagcccaacatcagttggaggaagcccaacatcagttgtttactgcagaactagcattgaaaatgcttcttgaataccgggagcttgcagaggctcgtaacaccagtggtgaaacagcattccatttgttggctgggaaacctacagcatttagatcagcaatgttgaaacgcttccttcacacttgtttaggaaagcagctcaaaactcctggccttcaagtactaaagcaactttggaaaatagtttcagagaaagatgagaagacggttaaaggaatcttaacaattccttcaaatgcattgttcattgcagctaaatgtggaaatgttcagttcctggctgagcttatagcctccgatgagttcgatcgtgctttaatatttgaaacagatgagtgcaatcggaatatattccacattggagctatgtatcatcagtggagtatcttcagtctggtacataagttgggtacagatgagtattccatactctctgcacaagatgatgggggcaacaccatactgcatttagcagcaaaggtagctggaccccttcatgatcaatgggataagatggttggacttgaaattcgaatgaaacgagatttgaaatggtttaaggatgtgacaaaggttgtgccacctgattgcctagataaaacgaactcggaagataaaaagcctggagatatattcatcgagcaacatggagctttaaatgatctcttggtgaatcaaaaggagatgtcatggacgaccttgctagcaatattcgctagttcctttgggattgtcgcagccctagttgatgctgcaaattttgtattgcaacagattcgaagcaactaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

609

Amino Acids

70.25

Weight (kDa)

5.21

Isoelectric Point (pI)

39.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 42, 1108
AcsI RAATTY 2 cut(s) 1569, 1798
AcuI CTGAAG 1 cut(s) 1414
AfaI GTAC 3 cut(s) 1203, 1440, 1453
AgsI TTSAA 8 cut(s) 1039, 1052, 1147, 1199, 1275, 1367, 1568, 1591
AjiI CACGTC 1 cut(s) 944
AjnI CCWGG 3 cut(s) 1189, 1317, 1663
Alw21I GWGCWC 3 cut(s) 763, 841, 919
AlwNI CAGNNNCTG 1 cut(s) 1318
AoxI GGCC 2 cut(s) 948, 1192
ApeKI GCWGC 5 cut(s) 1177, 1292, 1514, 1778, 1793
ApoI RAATTY 2 cut(s) 1569, 1798
ArsI GACNNNNNNTTYG 2 cut(s) 1554, 1586
Asp700I GAANNNNTTC 2 cut(s) 1151, 1391
AspS9I GGNCC 1 cut(s) 1529
AsuC2I CCSGG 1 cut(s) 1058
AsuII TTCGAA 2 cut(s) 1573, 1819
AsuNHI GCTAGC 1 cut(s) 1744
AvaII GGWCC 1 cut(s) 1529
BaeI ACNNNNGTAYC 2 cut(s) 1430, 1463
BanII GRGCYC 3 cut(s) 763, 841, 919
BbsI GAAGAC 1 cut(s) 1250
Bbv12I GWGCWC 3 cut(s) 763, 841, 919
BbvI GCAGC 5 cut(s) 1189, 1304, 1526, 1780, 1790
BccI CCATC 4 cut(s) 44, 959, 1481, 1549
BcgI CGANNNNNNTGC 1 cut(s) 1799
BciT130I CCWGG 3 cut(s) 1191, 1319, 1665
BclI TGATCA 1 cut(s) 1540
BcnI CCSGG 1 cut(s) 1058
BfaI CTAG 5 cut(s) 1031, 1634, 1745, 1758, 1784
BfmI CTRYAG 2 cut(s) 1023, 1122
BisI GCNGC 5 cut(s) 1178, 1293, 1515, 1779, 1794
BlpI GCTNAGC 1 cut(s) 1323
BlsI GCNGC 5 cut(s) 1179, 1294, 1516, 1780, 1795
BmcAI AGTACT 1 cut(s) 1203
Bme1390I CCNGG 4 cut(s) 1058, 1191, 1319, 1665
Bme18I GGWCC 1 cut(s) 1529
BmgBI CACGTC 1 cut(s) 944
BmgT120I GGNCC 1 cut(s) 1529
BmiI GGNNCC 1 cut(s) 1531
BmrFI CCNGG 4 cut(s) 1058, 1191, 1319, 1665
BmsI GCATC 2 cut(s) 753, 1780
BmtI GCTAGC 1 cut(s) 1748
BoxI GACNNNNGTC 1 cut(s) 14
BpiI GAAGAC 1 cut(s) 1250
BpmI CTGGAG 1 cut(s) 1686
Bpu1102I GCTNAGC 1 cut(s) 1323
Bpu14I TTCGAA 2 cut(s) 1573, 1819
BpuMI CCSGG 1 cut(s) 1058
BsaJI CCNNGG 1 cut(s) 41
Bse1I ACTGG 1 cut(s) 1083
Bse3DI GCAATG 2 cut(s) 1146, 1287
BseBI CCWGG 3 cut(s) 1191, 1319, 1665
BseDI CCNNGG 1 cut(s) 41
BseGI GGATG 2 cut(s) 36, 1609
BseMI GCAATG 2 cut(s) 1146, 1287
BseMII CTCAG 1 cut(s) 1314
BseNI ACTGG 1 cut(s) 1083
BseXI GCAGC 5 cut(s) 1189, 1304, 1526, 1780, 1790
BseYI CCCAGC 1 cut(s) 1112
BsgI GTGCAG 1 cut(s) 1461
Bsh1285I CGRYCG 1 cut(s) 1351
BshFI GGCC 2 cut(s) 950, 1194
BsiEI CGRYCG 1 cut(s) 1351
BsiHKAI GWGCWC 3 cut(s) 763, 841, 919
BsiSI CCGG 1 cut(s) 1057
BsmBI CGTCTC 4 cut(s) 135, 723, 801, 879
BsmI GAATGC 1 cut(s) 1097
BsnI GGCC 2 cut(s) 950, 1194
Bsp119I TTCGAA 2 cut(s) 1573, 1819
Bsp1286I GDGCHC 3 cut(s) 763, 841, 919
Bsp143I GATC 4 cut(s) 1133, 1348, 1540, 1702
Bsp1720I GCTNAGC 1 cut(s) 1323
BspANI GGCC 2 cut(s) 950, 1194
BspCNI CTCAG 1 cut(s) 1315
BspHI TCATGA 1 cut(s) 1537
BspLI GGNNCC 1 cut(s) 1531
BspMAI CTGCAG 1 cut(s) 1027
BspOI GCTAGC 1 cut(s) 1748
BspT104I TTCGAA 2 cut(s) 1573, 1819
BsrDI GCAATG 2 cut(s) 1146, 1287
BsrI ACTGG 1 cut(s) 1083
BssECI CCNNGG 1 cut(s) 41
BssMI GATC 4 cut(s) 1133, 1348, 1540, 1702
BssT1I CCWWGG 1 cut(s) 41
Bst2UI CCWGG 3 cut(s) 1191, 1319, 1665
Bst4CI ACNGT 1 cut(s) 1249
BstBI TTCGAA 2 cut(s) 1573, 1819
BstC8I GCNNGC 3 cut(s) 56, 1065, 1746
BstDEI CTNAG 1 cut(s) 1323
BstF5I GGATG 2 cut(s) 36, 1609
BstKTI GATC 4 cut(s) 1136, 1351, 1543, 1705
BstMBI GATC 4 cut(s) 1133, 1348, 1540, 1702
BstMCI CGRYCG 1 cut(s) 1351
BstMWI GCNNNNNNNGC 3 cut(s) 1031, 1523, 1754
BstNI CCWGG 3 cut(s) 1191, 1319, 1665
BstPAI GACNNNNGTC 1 cut(s) 14
BstSCI CCNGG 4 cut(s) 1056, 1189, 1317, 1663
BstSFI CTRYAG 2 cut(s) 1023, 1122
BstV1I GCAGC 5 cut(s) 1189, 1304, 1526, 1780, 1790
BstV2I GAAGAC 1 cut(s) 1250
BsuRI GGCC 2 cut(s) 950, 1194
BtrI CACGTC 1 cut(s) 944
BtsCI GGATG 2 cut(s) 36, 1609
BtsIMutI CAGTG 2 cut(s) 1090, 1424
Cac8I GCNNGC 3 cut(s) 56, 1065, 1746
CaiI CAGNNNCTG 1 cut(s) 1318
CciI TCATGA 1 cut(s) 1537
Cfr13I GGNCC 1 cut(s) 1529
Csp6I GTAC 3 cut(s) 1202, 1439, 1452
CviAII CATG 3 cut(s) 1538, 1688, 1731
CviQI GTAC 3 cut(s) 1202, 1439, 1452
DdeI CTNAG 1 cut(s) 1323
DpnI GATC 4 cut(s) 1135, 1350, 1542, 1704
DpnII GATC 4 cut(s) 1133, 1348, 1540, 1702
DraI TTTAAA 1 cut(s) 1698
Ecl136II GAGCTC 3 cut(s) 761, 839, 917
Eco130I CCWWGG 1 cut(s) 41
Eco24I GRGCYC 3 cut(s) 763, 841, 919
Eco47I GGWCC 1 cut(s) 1529
Eco53kI GAGCTC 3 cut(s) 761, 839, 917
Eco57I CTGAAG 1 cut(s) 1414
EcoICRI GAGCTC 3 cut(s) 761, 839, 917
EcoRII CCWGG 3 cut(s) 1189, 1317, 1663
EcoT14I CCWWGG 1 cut(s) 41
EcoT22I ATGCAT 1 cut(s) 1282
EcoT38I GRGCYC 3 cut(s) 763, 841, 919
ErhI CCWWGG 1 cut(s) 41
Esp3I CGTCTC 4 cut(s) 135, 723, 801, 879
FaeI CATG 3 cut(s) 1541, 1691, 1734
FatI CATG 3 cut(s) 1537, 1687, 1730
FbaI TGATCA 1 cut(s) 1540
Fnu4HI GCNGC 5 cut(s) 1178, 1293, 1515, 1779, 1794
FokI GGATG 2 cut(s) 23, 1616
FriOI GRGCYC 3 cut(s) 763, 841, 919
Fsp4HI GCNGC 5 cut(s) 1178, 1293, 1515, 1779, 1794
FspBI CTAG 5 cut(s) 1031, 1634, 1745, 1758, 1784
GluI GCNGC 5 cut(s) 1178, 1293, 1515, 1779, 1794
GsaI CCCAGC 1 cut(s) 1116
GsuI CTGGAG 1 cut(s) 1686
HaeIII GGCC 2 cut(s) 950, 1194
HapII CCGG 1 cut(s) 1057
Hin1II CATG 3 cut(s) 1541, 1691, 1734
HinfI GANTC 3 cut(s) 1257, 1714, 1816
HpaII CCGG 1 cut(s) 1057
Hpy166II GTNNAC 1 cut(s) 1020
Hpy188III TCNNGA 2 cut(s) 1049, 1538
Hpy8I GTNNAC 1 cut(s) 1020
Hpy99I CGWCG 1 cut(s) 945
HpyCH4III ACNGT 1 cut(s) 1249
HpyCH4IV ACGT 2 cut(s) 922, 943
HpyCH4V TGCA 9 cut(s) 1025, 1067, 1280, 1292, 1380, 1478, 1507, 1796, 1810
HpyF10VI GCNNNNNNNGC 3 cut(s) 1031, 1523, 1754
HpyF3I CTNAG 1 cut(s) 1323
HpySE526I ACGT 2 cut(s) 922, 943
Hsp92II CATG 3 cut(s) 1541, 1691, 1734
Ksp22I TGATCA 1 cut(s) 1540
Kzo9I GATC 4 cut(s) 1133, 1348, 1540, 1702
LmnI GCTCC 7 cut(s) 758, 836, 914, 972, 1060, 1403, 1691
Lsp1109I GCAGC 5 cut(s) 1189, 1304, 1526, 1780, 1790
LweI GCATC 2 cut(s) 753, 1780
MaeI CTAG 5 cut(s) 1031, 1634, 1745, 1758, 1784
MaeII ACGT 2 cut(s) 922, 943
MaeIII GTNAC 4 cut(s) 7, 16, 1076, 1606
MalI GATC 4 cut(s) 1135, 1350, 1542, 1704
MboI GATC 4 cut(s) 1133, 1348, 1540, 1702
MhlI GDGCHC 3 cut(s) 763, 841, 919
MluCI AATT 3 cut(s) 1266, 1569, 1798
MmeI TCCRAC 2 cut(s) 975, 1540
MnlI CCTC 8 cut(s) 61, 769, 847, 925, 940, 991, 1063, 1345
Mph1103I ATGCAT 1 cut(s) 1282
MroXI GAANNNNTTC 2 cut(s) 1151, 1391
MseI TTAA 5 cut(s) 1251, 1262, 1358, 1599, 1697
MspI CCGG 1 cut(s) 1057
MspR9I CCNGG 4 cut(s) 1058, 1191, 1319, 1665
Mva1269I GAATGC 1 cut(s) 1097
MvaI CCWGG 3 cut(s) 1191, 1319, 1665
MwoI GCNNNNNNNGC 3 cut(s) 1031, 1523, 1754
NciI CCSGG 1 cut(s) 1058
NdeII GATC 4 cut(s) 1133, 1348, 1540, 1702
NheI GCTAGC 1 cut(s) 1744
NlaIII CATG 3 cut(s) 1541, 1691, 1734
NlaIV GGNNCC 1 cut(s) 1531
NmuCI GTSAC 3 cut(s) 7, 16, 1606
NsiI ATGCAT 1 cut(s) 1282
NspV TTCGAA 2 cut(s) 1573, 1819
PagI TCATGA 1 cut(s) 1537
PcsI WCGNNNNNNNCGW 1 cut(s) 1579
PctI GAATGC 1 cut(s) 1097
PdmI GAANNNNTTC 2 cut(s) 1151, 1391
PfeI GAWTC 3 cut(s) 1257, 1714, 1816
PflMI CCANNNNNTGG 2 cut(s) 42, 1108
PkrI GCNGC 5 cut(s) 1179, 1294, 1516, 1780, 1795
Ple19I CGATCG 1 cut(s) 1351
PshAI GACNNNNGTC 1 cut(s) 14
Psp124BI GAGCTC 3 cut(s) 763, 841, 919
Psp6I CCWGG 3 cut(s) 1189, 1317, 1663
PspFI CCCAGC 1 cut(s) 1112
PspGI CCWGG 3 cut(s) 1189, 1317, 1663
PspN4I GGNNCC 1 cut(s) 1531
PspPI GGNCC 1 cut(s) 1529
PstI CTGCAG 1 cut(s) 1027
PstNI CAGNNNCTG 1 cut(s) 1318
PvuI CGATCG 1 cut(s) 1351
RsaI GTAC 3 cut(s) 1203, 1440, 1453
RsaNI GTAC 3 cut(s) 1202, 1439, 1452
SacI GAGCTC 3 cut(s) 763, 841, 919
SaqAI TTAA 5 cut(s) 1251, 1262, 1358, 1599, 1697
SatI GCNGC 5 cut(s) 1178, 1293, 1515, 1779, 1794
Sau3AI GATC 4 cut(s) 1133, 1348, 1540, 1702
Sau96I GGNCC 1 cut(s) 1529
ScaI AGTACT 1 cut(s) 1203
ScrFI CCNGG 4 cut(s) 1058, 1191, 1319, 1665
SduI GDGCHC 3 cut(s) 763, 841, 919
SfaNI GCATC 2 cut(s) 753, 1780
SfcI CTRYAG 2 cut(s) 1023, 1122
SfuI TTCGAA 2 cut(s) 1573, 1819
SinI GGWCC 1 cut(s) 1529
Sse9I AATT 3 cut(s) 1266, 1569, 1798
SspI AATATT 2 cut(s) 1362, 1752
SspMI CTAG 5 cut(s) 1031, 1634, 1745, 1758, 1784
SstI GAGCTC 3 cut(s) 763, 841, 919
StyD4I CCNGG 4 cut(s) 1056, 1189, 1317, 1663
StyI CCWWGG 1 cut(s) 41
TaaI ACNGT 1 cut(s) 1249
TaiI ACGT 2 cut(s) 925, 946
TasI AATT 3 cut(s) 1266, 1569, 1798
TatI WGTACW 1 cut(s) 1201
TfiI GAWTC 3 cut(s) 1257, 1714, 1816
Tru1I TTAA 5 cut(s) 1251, 1262, 1358, 1599, 1697
Tru9I TTAA 5 cut(s) 1251, 1262, 1358, 1599, 1697
TscAI CASTG 2 cut(s) 1090, 1424
TseFI GTSAC 3 cut(s) 7, 16, 1606
TseI GCWGC 5 cut(s) 1177, 1292, 1514, 1778, 1793
Tsp45I GTSAC 3 cut(s) 7, 16, 1606
TspDTI ATGAA 4 cut(s) 1276, 1526, 1592, 1666
TspRI CASTG 2 cut(s) 1090, 1424
Van91I CCANNNNNTGG 2 cut(s) 42, 1108
VpaK11BI GGWCC 1 cut(s) 1529
XapI RAATTY 2 cut(s) 1569, 1798
XcmI CCANNNNNNNNNTGG 1 cut(s) 1109
XmnI GAANNNNTTC 2 cut(s) 1151, 1391
XspI CTAG 5 cut(s) 1031, 1634, 1745, 1758, 1784
ZrmI AGTACT 1 cut(s) 1203
Zsp2I ATGCAT 1 cut(s) 1282
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.