Rmu_sc0007049.1_g000001

Glutathione S-transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007049.1
N/A
Physical Location & Seq
Forward (+)
1 .. 1319
1319 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 349 bp
gggatcaaagatttttgggtcatttgtgacattcctcaagagcaaggatcccagcgacggttcggaacaggctttgcttaatgaactgaaggcattggatgagcatcttaaggcacatggtccatacattgctggggagaaggtcactgctgctgatctaagcttggcaccaaaactgtaccatctcaaggtggctcttggccatttcaagaagtggactgtccctgaaagcttgacccattaccacaagtacactgagttgttgttctcaagggaatcttttgtaaagaccatcgctgaagagaaacatattattgcaggatgggagccgaaagtcaaccccaaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0004364 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005777 GO:0005829 GO:0005886 GO:0005975 GO:0005996 GO:0006082 GO:0006464 GO:0006518 GO:0006575 GO:0006732 GO:0006749 GO:0006766 GO:0006767 GO:0006790 GO:0006807 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009056 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009608 GO:0009610 GO:0009620 GO:0009636 GO:0009719 GO:0009725 GO:0009753 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010043 GO:0010193 GO:0010646 GO:0010647 GO:0010731 GO:0015036 GO:0015037 GO:0015038 GO:0016020 GO:0016209 GO:0016491 GO:0016667 GO:0016672 GO:0016740 GO:0016765 GO:0016999 GO:0017001 GO:0017144 GO:0019538 GO:0019752 GO:0019852 GO:0023051 GO:0023056 GO:0033218 GO:0033355 GO:0033554 GO:0034599 GO:0034614 GO:0034641 GO:0035690 GO:0036211 GO:0042221 GO:0042277 GO:0042493 GO:0042542 GO:0042579 GO:0042737 GO:0042743 GO:0042744 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043295 GO:0043412 GO:0043436 GO:0043603 GO:0043900 GO:0043903 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044267 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045174 GO:0046677 GO:0046872 GO:0046914 GO:0048037 GO:0048046 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051186 GO:0051187 GO:0051704 GO:0051707 GO:0051716 GO:0055114 GO:0065007 GO:0070301 GO:0070887 GO:0071236 GO:0071704 GO:0071944 GO:0072341 GO:0072593 GO:0080151 GO:0097237 GO:0098754 GO:0098869 GO:1900750 GO:1901564 GO:1901681 GO:1901700 GO:1901701 GO:1990748 GO:2000031 GO:2001023 GO:2001025 GO:2001038 GO:2001040
KEGG Pathways
Metabolic & Signaling
ko00053 ko00480 ko01100 map00053 map00480 map01100
Pfam Domains
Protein Families
GST_C_2 GST_N_3

Protein Analysis

115

Amino Acids

12.9

Weight (kDa)

8.77

Isoelectric Point (pI)

28.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_C PF00043 19 - 91 9.6e-06 Glutathione S-transferase, C-terminal domain
GST_C_2 PF13410 22 - 81 9.3e-09 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 167
AclWI GGATC 3 cut(s) 11, 42, 55
AcoI YGGCCR 1 cut(s) 200
AcuI CTGAAG 2 cut(s) 108, 319
AfaI GTAC 2 cut(s) 180, 252
AfiI CCNNNNNNNGG 2 cut(s) 57, 188
AflII CTTAAG 1 cut(s) 108
AgsI TTSAA 1 cut(s) 209
AluBI AGCT 2 cut(s) 163, 232
AluI AGCT 2 cut(s) 163, 232
AlwI GGATC 3 cut(s) 11, 42, 55
AoxI GGCC 1 cut(s) 200
ApeKI GCWGC 1 cut(s) 150
AspS9I GGNCC 1 cut(s) 120
AvaII GGWCC 1 cut(s) 120
BalI TGGCCA 1 cut(s) 202
BamHI GGATCC 1 cut(s) 47
BanI GGYRCC 1 cut(s) 167
BbvI GCAGC 1 cut(s) 137
BccI CCATC 3 cut(s) 190, 300, 316
BfrI CTTAAG 1 cut(s) 108
BisI GCNGC 1 cut(s) 151
BlsI GCNGC 1 cut(s) 152
Bme18I GGWCC 1 cut(s) 120
BmgT120I GGNCC 1 cut(s) 120
BmiI GGNNCC 3 cut(s) 49, 169, 328
BmsI GCATC 1 cut(s) 113
BpuEI CTTGAG 3 cut(s) 21, 171, 254
BsaBI GATNNNNATC 1 cut(s) 103
Bsc4I CCNNNNNNNGG 2 cut(s) 57, 188
Bse3DI GCAATG 1 cut(s) 127
Bse8I GATNNNNATC 1 cut(s) 103
BseGI GGATG 2 cut(s) 104, 327
BseJI GATNNNNATC 1 cut(s) 103
BseLI CCNNNNNNNGG 2 cut(s) 57, 188
BseMI GCAATG 1 cut(s) 127
BseMII CTCAG 1 cut(s) 247
BseXI GCAGC 1 cut(s) 137
BseYI CCCAGC 2 cut(s) 51, 132
BshFI GGCC 1 cut(s) 202
BshNI GGYRCC 1 cut(s) 167
BslFI GGGAC 1 cut(s) 207
BslI CCNNNNNNNGG 2 cut(s) 57, 188
BsmFI GGGAC 1 cut(s) 207
BsnI GGCC 1 cut(s) 202
Bsp143I GATC 3 cut(s) 3, 47, 155
BspANI GGCC 1 cut(s) 202
BspCNI CTCAG 1 cut(s) 248
BspLI GGNNCC 3 cut(s) 49, 169, 328
BspPI GGATC 3 cut(s) 11, 42, 55
BspT107I GGYRCC 1 cut(s) 167
BspTI CTTAAG 1 cut(s) 108
BsrDI GCAATG 1 cut(s) 127
BssMI GATC 3 cut(s) 3, 47, 155
Bst4CI ACNGT 3 cut(s) 60, 178, 221
Bst6I CTCTTC 1 cut(s) 295
BstAFI CTTAAG 1 cut(s) 108
BstDEI CTNAG 2 cut(s) 159, 256
BstF5I GGATG 2 cut(s) 104, 327
BstKTI GATC 3 cut(s) 6, 50, 158
BstMBI GATC 3 cut(s) 3, 47, 155
BstV1I GCAGC 1 cut(s) 137
BstX2I RGATCY 1 cut(s) 47
BstYI RGATCY 1 cut(s) 47
BsuRI GGCC 1 cut(s) 202
BtgZI GCGATG 1 cut(s) 278
BtsCI GGATG 2 cut(s) 104, 327
BtsI GCAGTG 1 cut(s) 145
BtsIMutI CAGTG 2 cut(s) 145, 253
Cfr13I GGNCC 1 cut(s) 120
Csp6I GTAC 2 cut(s) 179, 251
CviAII CATG 1 cut(s) 117
CviJI RGCY 6 cut(s) 72, 163, 195, 202, 232, 329
CviKI_1 RGCY 6 cut(s) 72, 163, 195, 202, 232, 329
CviQI GTAC 2 cut(s) 179, 251
DdeI CTNAG 2 cut(s) 159, 256
DpnI GATC 3 cut(s) 5, 49, 157
DpnII GATC 3 cut(s) 3, 47, 155
EaeI YGGCCR 1 cut(s) 200
Eam1104I CTCTTC 1 cut(s) 295
EarI CTCTTC 1 cut(s) 295
Eco47I GGWCC 1 cut(s) 120
Eco57I CTGAAG 2 cut(s) 108, 319
FaeI CATG 1 cut(s) 120
FaiI YATR 3 cut(s) 118, 125, 310
FalI AAGNNNNNCTT 2 cut(s) 263, 295
FaqI GGGAC 1 cut(s) 207
FatI CATG 1 cut(s) 116
Fnu4HI GCNGC 1 cut(s) 151
FokI GGATG 2 cut(s) 111, 334
Fsp4HI GCNGC 1 cut(s) 151
GluI GCNGC 1 cut(s) 151
GsaI CCCAGC 2 cut(s) 55, 136
HaeIII GGCC 1 cut(s) 202
Hin1II CATG 1 cut(s) 120
HincII GTYRAC 1 cut(s) 338
HindII GTYRAC 1 cut(s) 338
HindIII AAGCTT 2 cut(s) 161, 230
HinfI GANTC 1 cut(s) 276
Hpy166II GTNNAC 3 cut(s) 217, 253, 338
Hpy188I TCNGA 1 cut(s) 65
Hpy188III TCNNGA 2 cut(s) 38, 209
Hpy8I GTNNAC 3 cut(s) 217, 253, 338
Hpy99I CGWCG 1 cut(s) 60
HpyAV CCTTC 2 cut(s) 83, 134
HpyCH4III ACNGT 3 cut(s) 60, 178, 221
HpyCH4V TGCA 1 cut(s) 318
HpyF3I CTNAG 2 cut(s) 159, 256
Hsp92II CATG 1 cut(s) 120
Kzo9I GATC 3 cut(s) 3, 47, 155
LmnI GCTCC 1 cut(s) 326
LpnPI CCDG 5 cut(s) 54, 65, 118, 238, 304
Lsp1109I GCAGC 1 cut(s) 137
LweI GCATC 1 cut(s) 113
MaeIII GTNAC 2 cut(s) 26, 143
MalI GATC 3 cut(s) 5, 49, 157
MboI GATC 3 cut(s) 3, 47, 155
MboII GAAGA 1 cut(s) 312
MflI RGATCY 1 cut(s) 47
MlsI TGGCCA 1 cut(s) 202
MluNI TGGCCA 1 cut(s) 202
MnlI CCTC 1 cut(s) 45
Mox20I TGGCCA 1 cut(s) 202
MscI TGGCCA 1 cut(s) 202
MseI TTAA 2 cut(s) 79, 109
Msp20I TGGCCA 1 cut(s) 202
MspCI CTTAAG 1 cut(s) 108
NdeII GATC 3 cut(s) 3, 47, 155
NlaIII CATG 1 cut(s) 120
NlaIV GGNNCC 3 cut(s) 49, 169, 328
NmuCI GTSAC 2 cut(s) 26, 143
PfeI GAWTC 1 cut(s) 276
PkrI GCNGC 1 cut(s) 152
PspFI CCCAGC 2 cut(s) 51, 132
PspN4I GGNNCC 3 cut(s) 49, 169, 328
PspPI GGNCC 1 cut(s) 120
PsuI RGATCY 1 cut(s) 47
RsaI GTAC 2 cut(s) 180, 252
RsaNI GTAC 2 cut(s) 179, 251
SaqAI TTAA 2 cut(s) 79, 109
SatI GCNGC 1 cut(s) 151
Sau3AI GATC 3 cut(s) 3, 47, 155
Sau96I GGNCC 1 cut(s) 120
SetI ASST 4 cut(s) 145, 165, 193, 234
SfaNI GCATC 1 cut(s) 113
SinI GGWCC 1 cut(s) 120
SmlI CTYRAG 4 cut(s) 36, 108, 186, 269
SmoI CTYRAG 4 cut(s) 36, 108, 186, 269
TaaI ACNGT 3 cut(s) 60, 178, 221
TatI WGTACW 1 cut(s) 250
TfiI GAWTC 1 cut(s) 276
Tru1I TTAA 2 cut(s) 79, 109
Tru9I TTAA 2 cut(s) 79, 109
TscAI CASTG 2 cut(s) 152, 260
TseFI GTSAC 2 cut(s) 26, 143
TseI GCWGC 1 cut(s) 150
Tsp45I GTSAC 2 cut(s) 26, 143
TspDTI ATGAA 1 cut(s) 97
TspRI CASTG 2 cut(s) 152, 260
Vha464I CTTAAG 1 cut(s) 108
VpaK11BI GGWCC 1 cut(s) 120
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.