Rmu_sc0007415.1_g000007

Cyclin-dependent kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007415.1
N/A
Physical Location & Seq
Forward (+)
32993 .. 36942
3950 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007415.1_g000007.1.cds

Sequence Viewer

Length: 1080 bp
atgaccacggcggcatttgggcagatcaacaccgaagagctgcccacctggggctctcgcagcgccgattgcttcgagaaaatcaagcaaatcggcgccggcatgtatggccaagtcttcaaggccagagaaatcagaactggtgaaattgttgctttgaaaaggatacgtatggataatgaaaaagaagggtttcctattacagcaattcgggaaattaagcttctgaagaagcttcatcatgaaaatattattaagctgaaagagattgtaacttctgcaggtcctgaaaagaatgatcaagagaatcaagatagtaaaaagcttgagggtggcatctatatggttttcgagtatatggatcatgatttgacaggccttgctgatcgtcctggagttagattttcaattccccagataaagtacgccactgtgttgttatcttgggtgctttttataactttttccttcttatctgcttgtatcctgctacatagagatggtctgcaaagcaagcactggatgcagagtatttctgggttgatcctttaccttgtgatccgaagagtatccataattgtgttacctttgtcatacagcctgcccaagtatgaatcatcgcatgagtttgaaacaaagaaaaggaagcaggaacagcgacaacttgaagaacaaaacaagagaccaagattacaacatggtcgcctgcctccctatcaacatacagagcctcatcaaatgaaagatacacagccatcattttctgctggacctagtcaccacccctatggaaagcatcctgctcctcctggaggtccaagcatgtaccctcctaggaatcagagtggggcttacaacccaagccgtggaggtcatgttggaggatacagtggtgaaccatatccacctcaaggacgggctccacaatataatggcagcagtatgccagcttctggtcctagaggtccccccggtggttacggagttggtcctcctaactattcccaaactagtcagtatggaggtcctgcccctggtagaggtctgaataatcggagtcaacagtatggccggcagtaa

Protein Analysis

359

Amino Acids

40.18

Weight (kDa)

9.6

Isoelectric Point (pI)

52.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 458
Acc36I ACCTGC 1 cut(s) 272
AccB1I GGYRCC 1 cut(s) 95
AccB7I CCANNNNNTGG 2 cut(s) 866, 953
AciI CCGC 1 cut(s) 11
AclWI GGATC 3 cut(s) 369, 538, 553
AcoI YGGCCR 2 cut(s) 109, 1069
AcuI CTGAAG 1 cut(s) 248
AcyI GRCGYC 1 cut(s) 96
AfaI GTAC 2 cut(s) 425, 827
AfiI CCNNNNNNNGG 8 cut(s) 50, 812, 866, 911, 953, 974, 1034, 1040
AgsI TTSAA 5 cut(s) 121, 160, 408, 632, 668
AhlI ACTAGT 1 cut(s) 1010
AjnI CCWGG 4 cut(s) 47, 391, 808, 1033
AluBI AGCT 6 cut(s) 40, 223, 235, 259, 325, 950
AluI AGCT 6 cut(s) 40, 223, 235, 259, 325, 950
Alw26I GTCTC 1 cut(s) 676
AlwI GGATC 3 cut(s) 369, 538, 553
AlwNI CAGNNNCTG 2 cut(s) 287, 953
AoxI GGCC 4 cut(s) 109, 123, 376, 1069
ApeKI GCWGC 3 cut(s) 40, 60, 936
Asp700I GAANNNNTTC 1 cut(s) 192
AspA2I CCTAGG 1 cut(s) 833
AspLEI GCGC 2 cut(s) 65, 98
AspS9I GGNCC 7 cut(s) 284, 770, 815, 956, 965, 989, 1025
AsuC2I CCSGG 1 cut(s) 972
AsuHPI GGTGA 3 cut(s) 155, 770, 905
AvaII GGWCC 7 cut(s) 284, 770, 815, 956, 965, 989, 1025
AvrII CCTAGG 1 cut(s) 833
BaeI ACNNNNGTAYC 2 cut(s) 877, 910
BalI TGGCCA 1 cut(s) 111
BanI GGYRCC 1 cut(s) 95
BanII GRGCYC 2 cut(s) 56, 922
BarI GAAGNNNNNNTAC 2 cut(s) 934, 966
BbsI GAAGAC 1 cut(s) 109
BbvI GCAGC 3 cut(s) 27, 72, 948
BccI CCATC 2 cut(s) 494, 763
BceAI ACGGC 2 cut(s) 24, 849
BciT130I CCWGG 4 cut(s) 49, 393, 810, 1035
BciVI GTATCC 4 cut(s) 159, 494, 580, 878
BclI TGATCA 1 cut(s) 298
BcnI CCSGG 1 cut(s) 972
BcoDI GTCTC 1 cut(s) 676
BcuI ACTAGT 1 cut(s) 1010
BfaI CTAG 4 cut(s) 774, 834, 960, 1011
BfmI CTRYAG 1 cut(s) 279
BfoI RGCGCY 2 cut(s) 66, 99
BfuAI ACCTGC 1 cut(s) 272
BfuI GTATCC 4 cut(s) 159, 494, 580, 878
BisI GCNGC 4 cut(s) 12, 41, 61, 937
BlnI CCTAGG 1 cut(s) 833
BlsI GCNGC 4 cut(s) 13, 42, 62, 938
Bme1390I CCNGG 5 cut(s) 49, 393, 810, 972, 1035
Bme18I GGWCC 7 cut(s) 284, 770, 815, 956, 965, 989, 1025
BmgT120I GGNCC 7 cut(s) 284, 770, 815, 956, 965, 989, 1025
BmiI GGNNCC 3 cut(s) 97, 921, 967
BmrFI CCNGG 5 cut(s) 49, 393, 810, 972, 1035
BmsI GCATC 3 cut(s) 345, 513, 805
BpiI GAAGAC 1 cut(s) 109
BpmI CTGGAG 2 cut(s) 414, 831
BpuEI CTTGAG 2 cut(s) 347, 894
BpuMI CCSGG 1 cut(s) 972
BsaAI YACGTR 1 cut(s) 170
BsaHI GRCGYC 1 cut(s) 96
BsaI GGTCTC 1 cut(s) 676
BsaJI CCNNGG 6 cut(s) 6, 48, 833, 865, 970, 1033
BsaXI ACNNNNNCTCC 2 cut(s) 861, 891
Bsc4I CCNNNNNNNGG 8 cut(s) 50, 812, 866, 911, 953, 974, 1034, 1040
Bse118I RCCGGY 2 cut(s) 98, 1071
Bse1I ACTGG 2 cut(s) 145, 524
BseBI CCWGG 4 cut(s) 49, 393, 810, 1035
BseDI CCNNGG 6 cut(s) 6, 48, 833, 865, 970, 1033
BseGI GGATG 2 cut(s) 528, 796
BseLI CCNNNNNNNGG 8 cut(s) 50, 812, 866, 911, 953, 974, 1034, 1040
BseNI ACTGG 2 cut(s) 145, 524
BseRI GAGGAG 1 cut(s) 795
BseXI GCAGC 3 cut(s) 27, 72, 948
BshFI GGCC 4 cut(s) 111, 125, 378, 1071
BshNI GGYRCC 1 cut(s) 95
BsiSI CCGG 3 cut(s) 99, 972, 1072
BslFI GGGAC 1 cut(s) 951
BslI CCNNNNNNNGG 8 cut(s) 50, 812, 866, 911, 953, 974, 1034, 1040
BsmAI GTCTC 1 cut(s) 676
BsmFI GGGAC 1 cut(s) 951
BsnI GGCC 4 cut(s) 111, 125, 378, 1071
Bso31I GGTCTC 1 cut(s) 676
Bsp1286I GDGCHC 2 cut(s) 56, 922
Bsp143I GATC 6 cut(s) 24, 298, 361, 385, 543, 558
BspACI CCGC 1 cut(s) 11
BspANI GGCC 4 cut(s) 111, 125, 378, 1071
BspHI TCATGA 2 cut(s) 241, 364
BspLI GGNNCC 3 cut(s) 97, 921, 967
BspMAI CTGCAG 1 cut(s) 283
BspMI ACCTGC 1 cut(s) 272
BspPI GGATC 3 cut(s) 369, 538, 553
BspQI GCTCTTC 1 cut(s) 30
BspT107I GGYRCC 1 cut(s) 95
BspTNI GGTCTC 1 cut(s) 676
BsrFI RCCGGY 2 cut(s) 98, 1071
BsrI ACTGG 2 cut(s) 145, 524
BssAI RCCGGY 2 cut(s) 98, 1071
BssECI CCNNGG 6 cut(s) 6, 48, 833, 865, 970, 1033
BssMI GATC 6 cut(s) 24, 298, 361, 385, 543, 558
BssNI GRCGYC 1 cut(s) 96
BssT1I CCWWGG 1 cut(s) 833
Bst2UI CCWGG 4 cut(s) 49, 393, 810, 1035
Bst4CI ACNGT 3 cut(s) 433, 890, 1065
Bst6I CTCTTC 2 cut(s) 30, 559
BstACI GRCGYC 1 cut(s) 96
BstAPI GCANNNNNTGC 1 cut(s) 523
BstBAI YACGTR 1 cut(s) 170
BstC8I GCNNGC 6 cut(s) 100, 515, 602, 707, 948, 1073
BstDSI CCRYGG 2 cut(s) 6, 865
BstENI CCTNNNNNAGG 2 cut(s) 810, 1038
BstF5I GGATG 2 cut(s) 528, 796
BstH2I RGCGCY 2 cut(s) 66, 99
BstHHI GCGC 2 cut(s) 65, 98
BstKTI GATC 6 cut(s) 27, 301, 364, 388, 546, 561
BstMAI GTCTC 1 cut(s) 676
BstMBI GATC 6 cut(s) 24, 298, 361, 385, 543, 558
BstMWI GCNNNNNNNGC 6 cut(s) 60, 69, 108, 514, 523, 655
BstNI CCWGG 4 cut(s) 49, 393, 810, 1035
BstNSI RCATGY 2 cut(s) 106, 826
BstSCI CCNGG 5 cut(s) 47, 391, 808, 970, 1033
BstSFI CTRYAG 1 cut(s) 279
BstSNI TACGTA 1 cut(s) 170
BstV1I GCAGC 3 cut(s) 27, 72, 948
BstV2I GAAGAC 1 cut(s) 109
BstXI CCANNNNNNTGG 1 cut(s) 788
BsuI GTATCC 4 cut(s) 159, 494, 580, 878
BsuRI GGCC 4 cut(s) 111, 125, 378, 1071
BtgI CCRYGG 2 cut(s) 6, 865
BtgZI GCGATG 1 cut(s) 603
BtsCI GGATG 2 cut(s) 528, 796
BtsIMutI CAGTG 3 cut(s) 429, 517, 895
BveI ACCTGC 1 cut(s) 272
Cac8I GCNNGC 6 cut(s) 100, 515, 602, 707, 948, 1073
CaiI CAGNNNCTG 2 cut(s) 287, 953
CciI TCATGA 2 cut(s) 241, 364
CfoI GCGC 2 cut(s) 65, 98
Cfr10I RCCGGY 2 cut(s) 98, 1071
Cfr13I GGNCC 7 cut(s) 284, 770, 815, 956, 965, 989, 1025
Csp6I GTAC 2 cut(s) 424, 826
CviAII CATG 7 cut(s) 103, 242, 365, 623, 698, 823, 875
CviQI GTAC 2 cut(s) 424, 826
DinI GGCGCC 1 cut(s) 97
DpnI GATC 6 cut(s) 26, 300, 363, 387, 545, 560
DpnII GATC 6 cut(s) 24, 298, 361, 385, 543, 558
EaeI YGGCCR 2 cut(s) 109, 1069
Eam1104I CTCTTC 2 cut(s) 30, 559
EarI CTCTTC 2 cut(s) 30, 559
Eco105I TACGTA 1 cut(s) 170
Eco130I CCWWGG 1 cut(s) 833
Eco147I AGGCCT 1 cut(s) 378
Eco24I GRGCYC 2 cut(s) 56, 922
Eco31I GGTCTC 1 cut(s) 676
Eco47I GGWCC 7 cut(s) 284, 770, 815, 956, 965, 989, 1025
Eco57I CTGAAG 1 cut(s) 248
EcoNI CCTNNNNNAGG 2 cut(s) 810, 1038
EcoO109I RGGNCCY 3 cut(s) 284, 965, 1025
EcoRII CCWGG 4 cut(s) 47, 391, 808, 1033
EcoT14I CCWWGG 1 cut(s) 833
EcoT38I GRGCYC 2 cut(s) 56, 922
EgeI GGCGCC 1 cut(s) 97
EheI GGCGCC 1 cut(s) 97
ErhI CCWWGG 1 cut(s) 833
FaeI CATG 7 cut(s) 106, 245, 368, 626, 701, 826, 878
FaqI GGGAC 1 cut(s) 951
FatI CATG 7 cut(s) 102, 241, 364, 622, 697, 822, 874
FbaI TGATCA 1 cut(s) 298
Fnu4HI GCNGC 4 cut(s) 12, 41, 61, 937
FokI GGATG 2 cut(s) 535, 783
FriOI GRGCYC 2 cut(s) 56, 922
Fsp4HI GCNGC 4 cut(s) 12, 41, 61, 937
FspBI CTAG 4 cut(s) 774, 834, 960, 1011
GlaI GCGC 2 cut(s) 64, 97
GluI GCNGC 4 cut(s) 12, 41, 61, 937
GsuI CTGGAG 2 cut(s) 414, 831
HaeII RGCGCY 2 cut(s) 66, 99
HaeIII GGCC 4 cut(s) 111, 125, 378, 1071
HapII CCGG 3 cut(s) 99, 972, 1072
HhaI GCGC 2 cut(s) 65, 98
Hin1I GRCGYC 1 cut(s) 96
Hin1II CATG 7 cut(s) 106, 245, 368, 626, 701, 826, 878
Hin6I GCGC 2 cut(s) 63, 96
HinP1I GCGC 2 cut(s) 63, 96
HincII GTYRAC 1 cut(s) 1061
HindII GTYRAC 1 cut(s) 1061
HindIII AAGCTT 3 cut(s) 221, 233, 323
HinfI GANTC 4 cut(s) 307, 614, 838, 1057
HpaII CCGG 3 cut(s) 99, 972, 1072
HphI GGTGA 3 cut(s) 155, 770, 905
Hpy166II GTNNAC 2 cut(s) 896, 1061
Hpy188I TCNGA 6 cut(s) 137, 228, 563, 843, 1047, 1056
Hpy188III TCNNGA 7 cut(s) 76, 212, 242, 287, 302, 311, 365
Hpy8I GTNNAC 2 cut(s) 896, 1061
HpyAV CCTTC 2 cut(s) 182, 478
HpyCH4III ACNGT 3 cut(s) 433, 890, 1065
HpyCH4IV ACGT 1 cut(s) 169
HpyCH4V TGCA 3 cut(s) 281, 508, 526
HpyF10VI GCNNNNNNNGC 6 cut(s) 60, 69, 108, 514, 523, 655
HpySE526I ACGT 1 cut(s) 169
Hsp92I GRCGYC 1 cut(s) 96
Hsp92II CATG 7 cut(s) 106, 245, 368, 626, 701, 826, 878
HspAI GCGC 2 cut(s) 63, 96
KasI GGCGCC 1 cut(s) 95
KroI GCCGGC 2 cut(s) 98, 1071
KroNI GCCGGC 2 cut(s) 100, 1073
Ksp22I TGATCA 1 cut(s) 298
Kzo9I GATC 6 cut(s) 24, 298, 361, 385, 543, 558
LguI GCTCTTC 1 cut(s) 30
LmnI GCTCC 2 cut(s) 808, 925
Lsp1109I GCAGC 3 cut(s) 27, 72, 948
LweI GCATC 3 cut(s) 345, 513, 805
MaeI CTAG 4 cut(s) 774, 834, 960, 1011
MaeII ACGT 1 cut(s) 169
MaeIII GTNAC 4 cut(s) 271, 582, 776, 977
MalI GATC 6 cut(s) 26, 300, 363, 387, 545, 560
MboI GATC 6 cut(s) 24, 298, 361, 385, 543, 558
MboII GAAGA 5 cut(s) 47, 109, 241, 576, 680
MhlI GDGCHC 2 cut(s) 56, 922
MlsI TGGCCA 1 cut(s) 111
MluCI AATT 5 cut(s) 147, 207, 216, 408, 576
MluNI TGGCCA 1 cut(s) 111
Mly113I GGCGCC 1 cut(s) 96
MlyI GAGTC 1 cut(s) 1066
MmeI TCCRAC 1 cut(s) 859
Mox20I TGGCCA 1 cut(s) 111
MroNI GCCGGC 2 cut(s) 98, 1071
MroXI GAANNNNTTC 1 cut(s) 192
MscI TGGCCA 1 cut(s) 111
MseI TTAA 2 cut(s) 219, 255
MslI CAYNNNNRTG 4 cut(s) 341, 498, 578, 786
Msp20I TGGCCA 1 cut(s) 111
MspI CCGG 3 cut(s) 99, 972, 1072
MspR9I CCNGG 5 cut(s) 49, 393, 810, 972, 1035
MvaI CCWGG 4 cut(s) 49, 393, 810, 1035
MwoI GCNNNNNNNGC 6 cut(s) 60, 69, 108, 514, 523, 655
NaeI GCCGGC 2 cut(s) 100, 1073
NarI GGCGCC 1 cut(s) 96
NciI CCSGG 1 cut(s) 972
NdeII GATC 6 cut(s) 24, 298, 361, 385, 543, 558
NgoMIV GCCGGC 2 cut(s) 98, 1071
NlaIII CATG 7 cut(s) 106, 245, 368, 626, 701, 826, 878
NlaIV GGNNCC 3 cut(s) 97, 921, 967
NmuCI GTSAC 1 cut(s) 776
NspI RCATGY 2 cut(s) 106, 826
PagI TCATGA 2 cut(s) 241, 364
PceI AGGCCT 1 cut(s) 378
PciSI GCTCTTC 1 cut(s) 30
PdiI GCCGGC 2 cut(s) 100, 1073
PdmI GAANNNNTTC 1 cut(s) 192
PfeI GAWTC 3 cut(s) 307, 614, 838
PflFI GACNNNGTC 1 cut(s) 774
PflMI CCANNNNNTGG 2 cut(s) 866, 953
PfoI TCCNGGA 2 cut(s) 391, 808
PkrI GCNGC 4 cut(s) 13, 42, 62, 938
PleI GAGTC 1 cut(s) 1065
PluTI GGCGCC 1 cut(s) 99
PpsI GAGTC 1 cut(s) 1065
Ppu21I YACGTR 1 cut(s) 170
PpuMI RGGWCCY 3 cut(s) 284, 965, 1025
PsiI TTATAA 1 cut(s) 458
Psp5II RGGWCCY 3 cut(s) 284, 965, 1025
Psp6I CCWGG 4 cut(s) 47, 391, 808, 1033
PspGI CCWGG 4 cut(s) 47, 391, 808, 1033
PspN4I GGNNCC 3 cut(s) 97, 921, 967
PspPI GGNCC 7 cut(s) 284, 770, 815, 956, 965, 989, 1025
PspPPI RGGWCCY 3 cut(s) 284, 965, 1025
PstI CTGCAG 1 cut(s) 283
PstNI CAGNNNCTG 2 cut(s) 287, 953
PsyI GACNNNGTC 1 cut(s) 774
RsaI GTAC 2 cut(s) 425, 827
RsaNI GTAC 2 cut(s) 424, 826
RseI CAYNNNNRTG 4 cut(s) 341, 498, 578, 786
SapI GCTCTTC 1 cut(s) 30
SaqAI TTAA 2 cut(s) 219, 255
SatI GCNGC 4 cut(s) 12, 41, 61, 937
Sau3AI GATC 6 cut(s) 24, 298, 361, 385, 543, 558
Sau96I GGNCC 7 cut(s) 284, 770, 815, 956, 965, 989, 1025
SchI GAGTC 1 cut(s) 1066
ScrFI CCNGG 5 cut(s) 49, 393, 810, 972, 1035
SduI GDGCHC 2 cut(s) 56, 922
SfaNI GCATC 3 cut(s) 345, 513, 805
SfcI CTRYAG 1 cut(s) 279
SfoI GGCGCC 1 cut(s) 97
SinI GGWCC 7 cut(s) 284, 770, 815, 956, 965, 989, 1025
SmiMI CAYNNNNRTG 4 cut(s) 341, 498, 578, 786
SmlI CTYRAG 2 cut(s) 326, 909
SmoI CTYRAG 2 cut(s) 326, 909
SnaBI TACGTA 1 cut(s) 170
SpeI ACTAGT 1 cut(s) 1010
Sse9I AATT 5 cut(s) 147, 207, 216, 408, 576
SseBI AGGCCT 1 cut(s) 378
SsiI CCGC 1 cut(s) 11
SspDI GGCGCC 1 cut(s) 95
SspI AATATT 1 cut(s) 250
SspMI CTAG 4 cut(s) 774, 834, 960, 1011
StuI AGGCCT 1 cut(s) 378
StyD4I CCNGG 5 cut(s) 47, 391, 808, 970, 1033
StyI CCWWGG 1 cut(s) 833
TaaI ACNGT 3 cut(s) 433, 890, 1065
TaiI ACGT 1 cut(s) 172
TaqI TCGA 2 cut(s) 75, 351
TasI AATT 5 cut(s) 147, 207, 216, 408, 576
TauI GCSGC 1 cut(s) 14
TfiI GAWTC 3 cut(s) 307, 614, 838
Tru1I TTAA 2 cut(s) 219, 255
Tru9I TTAA 2 cut(s) 219, 255
TscAI CASTG 3 cut(s) 436, 524, 895
TseFI GTSAC 1 cut(s) 776
TseI GCWGC 3 cut(s) 40, 60, 936
Tsp45I GTSAC 1 cut(s) 776
TspDTI ATGAA 5 cut(s) 195, 227, 258, 627, 755
TspGWI ACGGA 1 cut(s) 996
TspRI CASTG 3 cut(s) 436, 524, 895
Tth111I GACNNNGTC 1 cut(s) 774
Van91I CCANNNNNTGG 2 cut(s) 866, 953
VpaK11BI GGWCC 7 cut(s) 284, 770, 815, 956, 965, 989, 1025
XagI CCTNNNNNAGG 2 cut(s) 810, 1038
XceI RCATGY 2 cut(s) 106, 826
XmaJI CCTAGG 1 cut(s) 833
XmnI GAANNNNTTC 1 cut(s) 192
XspI CTAG 4 cut(s) 774, 834, 960, 1011
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.