Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007437.1

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

8393 .. 10206

Gene Structure 1814 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1167 bp

atgtggagccaaccctaccggaaagatgacttggagtccggatcccggccgctctaccccatgatgctcgagagccccgagctccgctggtccttcatccgcaaaatctactccatcatcgccgtccaactgctcgccaccatcgccgtcgccgccaccgtcgtctcttaccacccgattgccaacttcttcgtcagtaccggcgccggcttggccctctacatagtcctcatcatcattcccttcatcgcttgttgtgaaattagggtttctgattttggcgccaccatcgccgtcgccgccaccgtcgtctcttaccacccgattgccaacttcttcgtcagtaccggcgccggcttggccctctacatagtcctcatcatcattcccttcatcgtgttgtgcccgctgtactattaccaccagaggcatcctgtgaattacctcctgcttgggattttcaccatctctcttgcctttgtggtgggattgacttgcgcttttaccagcgtaattgtgctccgctggtccttcatccgcaaaatctactccatcatcgccgtccaactgctcgccaccatcgccgtcgccgccaccgtcgtctcttaccacccgattgccaacttcttcgtcagtaccggcgccggcttggccctctacatagtcctcatcatcattcccttcatcgtgttgtgcccgctgtactattaccaccagaggcatcctgtgaattacctcctgcttgggattttcaccatctctcttgcctttgtggtgggattgacttgcgcttttactagcgggaaggttattttggagtctgtgatactcaccgttgtggttgtaattgctctcaccctgtacacattttgggctgcaaggagaggccatgatttcaattttcttggtcctttcttgaccggggcgttgctcgttctcattgtgttttctctgattcaggttttcttccctctgggtaagctctctgtgatgatatacgggtgcttggcatcgatcatcttttgtggatacattgtgtatgacacagacaatctcatcaagcgctactcttacgacgagtacatttgggctgcagtctcgttgtatttggatatcatcaacctgttccttgcattgctgactattttcagaagtgctgatggctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0009653 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009826 GO:0009987 GO:0010033 GO:0010941 GO:0014070 GO:0016043 GO:0016049 GO:0022603 GO:0023052 GO:0032502 GO:0032870 GO:0032989 GO:0033993 GO:0040007 GO:0042221 GO:0043207 GO:0043401 GO:0048519 GO:0048523 GO:0048545 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0060548 GO:0060560 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071840 GO:0098542 GO:1901700 GO:1901701 GO:1905421 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bax1-I

Protein Analysis

388

Amino Acids

43.16

Weight (kDa)

8.53

Isoelectric Point (pI)

23.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bax1-I	PF01027	177 - 383	1.6e-48	Inhibitor of apoptosis-promoting Bax1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	4 cut(s)	203, 281, 350, 641
AccBSI	CCGCTC	1 cut(s)	52
AccIII	TCCGGA	1 cut(s)	38
AclWI	GGATC	2 cut(s)	36, 49
AcoI	YGGCCR	1 cut(s)	47
AcyI	GRCGYC	4 cut(s)	204, 282, 351, 642
AfaI	GTAC	7 cut(s)	199, 346, 413, 637, 704, 863, 1082
AfeI	AGCGCT	1 cut(s)	1064
AfiI	CCNNNNNNNGG	1 cut(s)	45
AgsI	TTSAA	1 cut(s)	898
AhdI	GACNNNNNGTC	1 cut(s)	34
AjuI	GAANNNNNNNTTGG	4 cut(s)	14, 46, 797, 829
AleI	CACNNNNGTG	1 cut(s)	836
AluBI	AGCT	2 cut(s)	82, 982
AluI	AGCT	2 cut(s)	82, 982
Alw21I	GWGCWC	2 cut(s)	84, 522
Alw26I	GTCTC	4 cut(s)	169, 316, 607, 1102
AlwI	GGATC	2 cut(s)	36, 49
Ama87I	CYCGRG	2 cut(s)	68, 77
Aor13HI	TCCGGA	1 cut(s)	38
Aor51HI	AGCGCT	1 cut(s)	1064
AoxI	GGCC	5 cut(s)	47, 213, 360, 651, 886
ApeKI	GCWGC	2 cut(s)	875, 1091
AspLEI	GCGC	7 cut(s)	206, 284, 353, 500, 644, 791, 1065
AspS9I	GGNCC	6 cut(s)	90, 214, 361, 528, 652, 908
AsuC2I	CCSGG	2 cut(s)	46, 922
AsuHPI	GGTGA	4 cut(s)	454, 745, 823, 847
AvaI	CYCGRG	2 cut(s)	68, 77
AvaII	GGWCC	3 cut(s)	90, 528, 908
BaeGI	GKGCMC	2 cut(s)	407, 698
BamHI	GGATCC	1 cut(s)	41
BanI	GGYRCC	4 cut(s)	203, 281, 350, 641
BanII	GRGCYC	2 cut(s)	77, 84
Bbv12I	GWGCWC	2 cut(s)	84, 522
BbvI	GCAGC	2 cut(s)	862, 1078
BccI	CCATC	8 cut(s)	122, 149, 296, 473, 560, 587, 764, 1154
BceAI	ACGGC	5 cut(s)	107, 131, 278, 545, 569
BciVI	GTATCC	1 cut(s)	1022
BcnI	CCSGG	2 cut(s)	46, 922
BcoDI	GTCTC	4 cut(s)	169, 316, 607, 1102
BfaI	CTAG	1 cut(s)	798
BfmI	CTRYAG	1 cut(s)	1092
BfoI	RGCGCY	5 cut(s)	207, 285, 354, 645, 1066
BfuI	GTATCC	1 cut(s)	1022
BglI	GCCNNNNNGGC	3 cut(s)	212, 359, 650
BisI	GCNGC	6 cut(s)	50, 153, 300, 591, 876, 1092
BlsI	GCNGC	6 cut(s)	51, 154, 301, 592, 877, 1093
Bme1390I	CCNGG	2 cut(s)	46, 922
Bme18I	GGWCC	3 cut(s)	90, 528, 908
BmeRI	GACNNNNNGTC	1 cut(s)	34
BmeT110I	CYCGRG	2 cut(s)	68, 77
BmgT120I	GGNCC	6 cut(s)	90, 214, 361, 528, 652, 908
BmiI	GGNNCC	6 cut(s)	8, 43, 205, 283, 352, 643
BmrFI	CCNGG	2 cut(s)	46, 922
BmsI	GCATC	4 cut(s)	54, 439, 730, 1019
BpuMI	CCSGG	2 cut(s)	46, 922
Bsa29I	ATCGAT	1 cut(s)	1013
BsaHI	GRCGYC	4 cut(s)	204, 282, 351, 642
BsaJI	CCNNGG	1 cut(s)	921
BsaWI	WCCGGW	2 cut(s)	18, 38
Bsc4I	CCNNNNNNNGG	1 cut(s)	45
Bse118I	RCCGGY	6 cut(s)	200, 206, 347, 353, 638, 644
Bse3DI	GCAATG	1 cut(s)	1133
BseAI	TCCGGA	1 cut(s)	38
BseCI	ATCGAT	1 cut(s)	1013
BseDI	CCNNGG	1 cut(s)	921
BseGI	GGATG	4 cut(s)	96, 430, 534, 721
BseLI	CCNNNNNNNGG	1 cut(s)	45
BseMI	GCAATG	1 cut(s)	1133
BseSI	GKGCMC	2 cut(s)	407, 698
BseX3I	CGGCCG	1 cut(s)	47
BseXI	GCAGC	2 cut(s)	862, 1078
Bsh1285I	CGRYCG	1 cut(s)	50
BshFI	GGCC	5 cut(s)	49, 215, 362, 653, 888
BshNI	GGYRCC	4 cut(s)	203, 281, 350, 641
BshVI	ATCGAT	1 cut(s)	1013
BsiEI	CGRYCG	1 cut(s)	50
BsiHKAI	GWGCWC	2 cut(s)	84, 522
BsiHKCI	CYCGRG	2 cut(s)	68, 77
BslI	CCNNNNNNNGG	1 cut(s)	45
BsmAI	GTCTC	4 cut(s)	169, 316, 607, 1102
BsmBI	CGTCTC	3 cut(s)	169, 316, 607
BsnI	GGCC	5 cut(s)	49, 215, 362, 653, 888
BsoBI	CYCGRG	2 cut(s)	68, 77
Bsp1286I	GDGCHC	5 cut(s)	77, 84, 407, 522, 698
Bsp13I	TCCGGA	1 cut(s)	38
Bsp1407I	TGTACA	1 cut(s)	861
Bsp143I	GATC	2 cut(s)	41, 1014
BspANI	GGCC	5 cut(s)	49, 215, 362, 653, 888
BspDI	ATCGAT	1 cut(s)	1013
BspEI	TCCGGA	1 cut(s)	38
BspLI	GGNNCC	6 cut(s)	8, 43, 205, 283, 352, 643
BspMAI	CTGCAG	1 cut(s)	1096
BspPI	GGATC	2 cut(s)	36, 49
BspT107I	GGYRCC	4 cut(s)	203, 281, 350, 641
BsrBI	CCGCTC	1 cut(s)	52
BsrDI	GCAATG	1 cut(s)	1133
BsrFI	RCCGGY	6 cut(s)	200, 206, 347, 353, 638, 644
BsrGI	TGTACA	1 cut(s)	861
BssAI	RCCGGY	6 cut(s)	200, 206, 347, 353, 638, 644
BssECI	CCNNGG	1 cut(s)	921
BssMI	GATC	2 cut(s)	41, 1014
BssNI	GRCGYC	4 cut(s)	204, 282, 351, 642
Bst4CI	ACNGT	4 cut(s)	160, 307, 598, 835
BstACI	GRCGYC	4 cut(s)	204, 282, 351, 642
BstAUI	TGTACA	1 cut(s)	861
BstC8I	GCNNGC	7 cut(s)	135, 208, 355, 407, 573, 646, 698
BstF5I	GGATG	4 cut(s)	96, 430, 534, 721
BstH2I	RGCGCY	5 cut(s)	207, 285, 354, 645, 1066
BstHHI	GCGC	7 cut(s)	206, 284, 353, 500, 644, 791, 1065
BstKTI	GATC	2 cut(s)	44, 1017
BstMAI	GTCTC	4 cut(s)	169, 316, 607, 1102
BstMBI	GATC	2 cut(s)	41, 1014
BstMCI	CGRYCG	1 cut(s)	50
BstMWI	GCNNNNNNNGC	9 cut(s)	143, 152, 212, 290, 299, 359, 581, 590, 650
BstSCI	CCNGG	2 cut(s)	44, 920
BstSFI	CTRYAG	1 cut(s)	1092
BstSLI	GKGCMC	2 cut(s)	407, 698
BstV1I	GCAGC	2 cut(s)	862, 1078
BstX2I	RGATCY	1 cut(s)	41
BstYI	RGATCY	1 cut(s)	41
BstZI	CGGCCG	1 cut(s)	47
Bsu15I	ATCGAT	1 cut(s)	1013
BsuI	GTATCC	1 cut(s)	1022
BsuRI	GGCC	5 cut(s)	49, 215, 362, 653, 888
BsuTUI	ATCGAT	1 cut(s)	1013
BtgZI	GCGATG	6 cut(s)	103, 127, 232, 274, 541, 565
BtsCI	GGATG	4 cut(s)	96, 430, 534, 721
Cac8I	GCNNGC	7 cut(s)	135, 208, 355, 407, 573, 646, 698
CfoI	GCGC	7 cut(s)	206, 284, 353, 500, 644, 791, 1065
Cfr10I	RCCGGY	6 cut(s)	200, 206, 347, 353, 638, 644
Cfr13I	GGNCC	6 cut(s)	90, 214, 361, 528, 652, 908
ClaI	ATCGAT	1 cut(s)	1013
Csp6I	GTAC	7 cut(s)	198, 345, 412, 636, 703, 862, 1081
CviAII	CATG	2 cut(s)	61, 890
CviQI	GTAC	7 cut(s)	198, 345, 412, 636, 703, 862, 1081
DinI	GGCGCC	4 cut(s)	205, 283, 352, 643
DpnI	GATC	2 cut(s)	43, 1016
DpnII	GATC	2 cut(s)	41, 1014
DriI	GACNNNNNGTC	1 cut(s)	34
EaeI	YGGCCR	1 cut(s)	47
EagI	CGGCCG	1 cut(s)	47
Eam1105I	GACNNNNNGTC	1 cut(s)	34
Ecl136II	GAGCTC	1 cut(s)	82
EclXI	CGGCCG	1 cut(s)	47
Eco24I	GRGCYC	2 cut(s)	77, 84
Eco32I	GATATC	1 cut(s)	1114
Eco47I	GGWCC	3 cut(s)	90, 528, 908
Eco47III	AGCGCT	1 cut(s)	1064
Eco52I	CGGCCG	1 cut(s)	47
Eco53kI	GAGCTC	1 cut(s)	82
Eco88I	CYCGRG	2 cut(s)	68, 77
EcoICRI	GAGCTC	1 cut(s)	82
EcoRV	GATATC	1 cut(s)	1114
EcoT38I	GRGCYC	2 cut(s)	77, 84
EgeI	GGCGCC	4 cut(s)	205, 283, 352, 643
EheI	GGCGCC	4 cut(s)	205, 283, 352, 643
Esp3I	CGTCTC	3 cut(s)	169, 316, 607
FaeI	CATG	2 cut(s)	64, 893
FaiI	YATR	7 cut(s)	62, 224, 371, 662, 891, 997, 1041
FatI	CATG	2 cut(s)	60, 889
FauI	CCCGC	3 cut(s)	414, 705, 794
Fnu4HI	GCNGC	6 cut(s)	50, 153, 300, 591, 876, 1092
FokI	GGATG	4 cut(s)	83, 417, 521, 708
FriOI	GRGCYC	2 cut(s)	77, 84
Fsp4HI	GCNGC	6 cut(s)	50, 153, 300, 591, 876, 1092
FspBI	CTAG	1 cut(s)	798
GlaI	GCGC	7 cut(s)	205, 283, 352, 499, 643, 790, 1064
GluI	GCNGC	6 cut(s)	50, 153, 300, 591, 876, 1092
HaeII	RGCGCY	5 cut(s)	207, 285, 354, 645, 1066
HaeIII	GGCC	5 cut(s)	49, 215, 362, 653, 888
HhaI	GCGC	7 cut(s)	206, 284, 353, 500, 644, 791, 1065
Hin1I	GRCGYC	4 cut(s)	204, 282, 351, 642
Hin1II	CATG	2 cut(s)	64, 893
Hin6I	GCGC	7 cut(s)	204, 282, 351, 498, 642, 789, 1063
HinP1I	GCGC	7 cut(s)	204, 282, 351, 498, 642, 789, 1063
HinfI	GANTC	3 cut(s)	35, 818, 955
HphI	GGTGA	4 cut(s)	454, 745, 823, 847
Hpy166II	GTNNAC	1 cut(s)	864
Hpy188I	TCNGA	3 cut(s)	274, 954, 1151
Hpy188III	TCNNGA	3 cut(s)	39, 70, 916
Hpy8I	GTNNAC	1 cut(s)	864
Hpy99I	CGWCG	7 cut(s)	152, 164, 299, 311, 590, 602, 1079
HpyAV	CCTTC	6 cut(s)	103, 253, 400, 541, 691, 799
HpyCH4III	ACNGT	4 cut(s)	160, 307, 598, 835
HpyCH4V	TGCA	3 cut(s)	878, 1094, 1133
HpyF10VI	GCNNNNNNNGC	9 cut(s)	143, 152, 212, 290, 299, 359, 581, 590, 650
Hsp92I	GRCGYC	4 cut(s)	204, 282, 351, 642
Hsp92II	CATG	2 cut(s)	64, 893
HspAI	GCGC	7 cut(s)	204, 282, 351, 498, 642, 789, 1063
KasI	GGCGCC	4 cut(s)	203, 281, 350, 641
Kpn2I	TCCGGA	1 cut(s)	38
KroI	GCCGGC	3 cut(s)	206, 353, 644
KroNI	GCCGGC	3 cut(s)	208, 355, 646
Kzo9I	GATC	2 cut(s)	41, 1014
LmnI	GCTCC	3 cut(s)	6, 87, 525
Lsp1109I	GCAGC	2 cut(s)	862, 1078
LweI	GCATC	4 cut(s)	54, 439, 730, 1019
MaeI	CTAG	1 cut(s)	798
MalI	GATC	2 cut(s)	43, 1016
MbiI	CCGCTC	1 cut(s)	52
MboI	GATC	2 cut(s)	41, 1014
MboII	GAAGA	4 cut(s)	181, 328, 619, 958
MflI	RGATCY	1 cut(s)	41
MhlI	GDGCHC	5 cut(s)	77, 84, 407, 522, 698
MluCI	AATT	6 cut(s)	261, 439, 513, 730, 846, 898
Mly113I	GGCGCC	4 cut(s)	204, 282, 351, 642
MlyI	GAGTC	2 cut(s)	44, 827
MmeI	TCCRAC	2 cut(s)	151, 589
MroI	TCCGGA	1 cut(s)	38
MroNI	GCCGGC	3 cut(s)	206, 353, 644
MslI	CAYNNNNRTG	1 cut(s)	836
MspA1I	CMGCKG	4 cut(s)	87, 409, 525, 700
MspR9I	CCNGG	2 cut(s)	46, 922
MwoI	GCNNNNNNNGC	9 cut(s)	143, 152, 212, 290, 299, 359, 581, 590, 650
NaeI	GCCGGC	3 cut(s)	208, 355, 646
NarI	GGCGCC	4 cut(s)	204, 282, 351, 642
NciI	CCSGG	2 cut(s)	46, 922
NdeII	GATC	2 cut(s)	41, 1014
NgoMIV	GCCGGC	3 cut(s)	206, 353, 644
NlaIII	CATG	2 cut(s)	64, 893
NlaIV	GGNNCC	6 cut(s)	8, 43, 205, 283, 352, 643
OliI	CACNNNNGTG	1 cut(s)	836
PaeR7I	CTCGAG	1 cut(s)	68
PcsI	WCGNNNNNNNCGW	4 cut(s)	75, 156, 303, 594
PdiI	GCCGGC	3 cut(s)	208, 355, 646
PfeI	GAWTC	1 cut(s)	955
PkrI	GCNGC	6 cut(s)	51, 154, 301, 592, 877, 1093
PleI	GAGTC	2 cut(s)	43, 826
PluTI	GGCGCC	4 cut(s)	207, 285, 354, 645
PpsI	GAGTC	2 cut(s)	43, 826
Psp124BI	GAGCTC	1 cut(s)	84
PspN4I	GGNNCC	6 cut(s)	8, 43, 205, 283, 352, 643
PspPI	GGNCC	6 cut(s)	90, 214, 361, 528, 652, 908
PstI	CTGCAG	1 cut(s)	1096
PsuI	RGATCY	1 cut(s)	41
RsaI	GTAC	7 cut(s)	199, 346, 413, 637, 704, 863, 1082
RsaNI	GTAC	7 cut(s)	198, 345, 412, 636, 703, 862, 1081
RseI	CAYNNNNRTG	1 cut(s)	836
SacI	GAGCTC	1 cut(s)	84
SatI	GCNGC	6 cut(s)	50, 153, 300, 591, 876, 1092
Sau3AI	GATC	2 cut(s)	41, 1014
Sau96I	GGNCC	6 cut(s)	90, 214, 361, 528, 652, 908
SchI	GAGTC	2 cut(s)	44, 827
ScrFI	CCNGG	2 cut(s)	46, 922
SduI	GDGCHC	5 cut(s)	77, 84, 407, 522, 698
SetI	ASST	7 cut(s)	84, 447, 738, 810, 963, 984, 1125
SfaNI	GCATC	4 cut(s)	54, 439, 730, 1019
SfcI	CTRYAG	1 cut(s)	1092
SfoI	GGCGCC	4 cut(s)	205, 283, 352, 643
Sfr274I	CTCGAG	1 cut(s)	68
SinI	GGWCC	3 cut(s)	90, 528, 908
SlaI	CTCGAG	1 cut(s)	68
SmiMI	CAYNNNNRTG	1 cut(s)	836
SmlI	CTYRAG	1 cut(s)	68
SmoI	CTYRAG	1 cut(s)	68
Sse9I	AATT	6 cut(s)	261, 439, 513, 730, 846, 898
SspDI	GGCGCC	4 cut(s)	203, 281, 350, 641
SspMI	CTAG	1 cut(s)	798
SstI	GAGCTC	1 cut(s)	84
StyD4I	CCNGG	2 cut(s)	44, 920
TaaI	ACNGT	4 cut(s)	160, 307, 598, 835
TaqI	TCGA	2 cut(s)	69, 1013
TasI	AATT	6 cut(s)	261, 439, 513, 730, 846, 898
TatI	WGTACW	4 cut(s)	411, 702, 861, 1080
TauI	GCSGC	4 cut(s)	52, 155, 302, 593
TfiI	GAWTC	1 cut(s)	955
TseI	GCWGC	2 cut(s)	875, 1091
TspDTI	ATGAA	5 cut(s)	85, 235, 382, 523, 673
VpaK11BI	GGWCC	3 cut(s)	90, 528, 908
XhoI	CTCGAG	1 cut(s)	68
XspI	CTAG	1 cut(s)	798

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.