Rmu_sc0007457.1_g000018

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007457.1
N/A
Physical Location & Seq
Forward (+)
104502 .. 104966
465 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007457.1_g000018.1.cds

Sequence Viewer

Length: 465 bp
atgtctgcaagaatcttcaactcttcatcctcatacaaattctctgttccaccagagcaacgcctttggctcagactccatttctacccttcttcctataacagcctcaacaaatccgacacattttttgatgtaacctcaaatgggtttactctcctcaacaatttcagcgcctccatcactgccgaagctctcacgcaggcctacattgtcaaagaattctcactcattcctgtcaagtccgggaatctcaacatcacgttcagccccactttgtcacataagaaatcacatgctttcatgaacgggattgaggtgatacctatgccggatatattccatctggccaatttggtcagattcgatgaacaaacggtcaatgtacaaagctcgactcttcagaccatgtttcggctcaatgtggtggggagtatgttgggccaaccaacgactccgccaagctag

Protein Analysis

154

Amino Acids

17.25

Weight (kDa)

9.05

Isoelectric Point (pI)

51.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 455
AcoI YGGCCR 1 cut(s) 345
AcsI RAATTY 2 cut(s) 38, 218
AcuI CTGAAG 1 cut(s) 383
AfaI GTAC 1 cut(s) 384
AfiI CCNNNNNNNGG 2 cut(s) 144, 411
AgsI TTSAA 1 cut(s) 19
AluBI AGCT 3 cut(s) 191, 390, 462
AluI AGCT 3 cut(s) 191, 390, 462
AoxI GGCC 3 cut(s) 201, 345, 439
ApoI RAATTY 2 cut(s) 38, 218
ArsI GACNNNNNNTTYG 2 cut(s) 110, 142
AspLEI GCGC 1 cut(s) 173
AspS9I GGNCC 1 cut(s) 439
AsuC2I CCSGG 1 cut(s) 244
AsuHPI GGTGA 1 cut(s) 328
BalI TGGCCA 1 cut(s) 347
BccI CCATC 2 cut(s) 185, 348
BcnI CCSGG 1 cut(s) 244
BfaI CTAG 1 cut(s) 463
BfoI RGCGCY 1 cut(s) 174
Bme1390I CCNGG 1 cut(s) 244
BmgT120I GGNCC 1 cut(s) 439
BmrFI CCNGG 1 cut(s) 244
BpuMI CCSGG 1 cut(s) 244
Bsc4I CCNNNNNNNGG 2 cut(s) 144, 411
BseGI GGATG 1 cut(s) 26
BseLI CCNNNNNNNGG 2 cut(s) 144, 411
BseMII CTCAG 1 cut(s) 85
BseRI GAGGAG 1 cut(s) 146
BshFI GGCC 3 cut(s) 203, 347, 441
BsiSI CCGG 2 cut(s) 243, 329
BslI CCNNNNNNNGG 2 cut(s) 144, 411
BsnI GGCC 3 cut(s) 203, 347, 441
Bsp1407I TGTACA 1 cut(s) 382
BspACI CCGC 1 cut(s) 455
BspANI GGCC 3 cut(s) 203, 347, 441
BspCNI CTCAG 1 cut(s) 84
BspHI TCATGA 1 cut(s) 300
BsrGI TGTACA 1 cut(s) 382
Bst4CI ACNGT 1 cut(s) 376
Bst6I CTCTTC 2 cut(s) 28, 402
BstAUI TGTACA 1 cut(s) 382
BstC8I GCNNGC 1 cut(s) 201
BstDEI CTNAG 1 cut(s) 71
BstF5I GGATG 1 cut(s) 26
BstH2I RGCGCY 1 cut(s) 174
BstHHI GCGC 1 cut(s) 173
BstNSI RCATGY 1 cut(s) 296
BstSCI CCNGG 1 cut(s) 242
BsuRI GGCC 3 cut(s) 203, 347, 441
BtsCI GGATG 1 cut(s) 26
BtsI GCAGTG 1 cut(s) 180
BtsIMutI CAGTG 1 cut(s) 180
Cac8I GCNNGC 1 cut(s) 201
CciI TCATGA 1 cut(s) 300
CfoI GCGC 1 cut(s) 173
Cfr13I GGNCC 1 cut(s) 439
Csp6I GTAC 1 cut(s) 383
CviAII CATG 3 cut(s) 293, 301, 406
CviQI GTAC 1 cut(s) 383
DdeI CTNAG 1 cut(s) 71
EaeI YGGCCR 1 cut(s) 345
Eam1104I CTCTTC 2 cut(s) 28, 402
EarI CTCTTC 2 cut(s) 28, 402
EciI GGCGGA 1 cut(s) 444
Eco147I AGGCCT 1 cut(s) 203
Eco57I CTGAAG 1 cut(s) 383
EcoRI GAATTC 1 cut(s) 218
FaeI CATG 3 cut(s) 296, 304, 409
FaiI YATR 9 cut(s) 34, 99, 282, 294, 302, 326, 335, 407, 434
FatI CATG 3 cut(s) 292, 300, 405
FokI GGATG 1 cut(s) 13
FspBI CTAG 1 cut(s) 463
GlaI GCGC 1 cut(s) 172
HaeII RGCGCY 1 cut(s) 174
HaeIII GGCC 3 cut(s) 203, 347, 441
HapII CCGG 2 cut(s) 243, 329
HhaI GCGC 1 cut(s) 173
Hin1II CATG 3 cut(s) 296, 304, 409
Hin6I GCGC 1 cut(s) 171
HinP1I GCGC 1 cut(s) 171
HinfI GANTC 6 cut(s) 12, 75, 247, 360, 394, 451
HpaII CCGG 2 cut(s) 243, 329
HphI GGTGA 1 cut(s) 328
Hpy166II GTNNAC 1 cut(s) 150
Hpy188I TCNGA 4 cut(s) 74, 118, 359, 402
Hpy188III TCNNGA 1 cut(s) 301
Hpy8I GTNNAC 1 cut(s) 150
HpyAV CCTTC 1 cut(s) 99
HpyCH4III ACNGT 1 cut(s) 376
HpyCH4IV ACGT 1 cut(s) 260
HpyCH4V TGCA 1 cut(s) 8
HpyF3I CTNAG 1 cut(s) 71
HpySE526I ACGT 1 cut(s) 260
Hsp92II CATG 3 cut(s) 296, 304, 409
HspAI GCGC 1 cut(s) 171
LpnPI CCDG 6 cut(s) 66, 185, 246, 256, 329, 342
MaeI CTAG 1 cut(s) 463
MaeII ACGT 1 cut(s) 260
MaeIII GTNAC 2 cut(s) 133, 276
MboII GAAGA 4 cut(s) 7, 15, 84, 389
MlsI TGGCCA 1 cut(s) 347
MluCI AATT 4 cut(s) 38, 163, 218, 349
MluNI TGGCCA 1 cut(s) 347
MlyI GAGTC 3 cut(s) 69, 388, 445
MmeI TCCRAC 1 cut(s) 141
MnlI CCTC 6 cut(s) 40, 116, 148, 167, 184, 307
Mox20I TGGCCA 1 cut(s) 347
MscI TGGCCA 1 cut(s) 347
Msp20I TGGCCA 1 cut(s) 347
MspI CCGG 2 cut(s) 243, 329
MspR9I CCNGG 1 cut(s) 244
NciI CCSGG 1 cut(s) 244
NlaIII CATG 3 cut(s) 296, 304, 409
NmuCI GTSAC 1 cut(s) 276
NspI RCATGY 1 cut(s) 296
PagI TCATGA 1 cut(s) 300
PceI AGGCCT 1 cut(s) 203
PfeI GAWTC 3 cut(s) 12, 247, 360
PfoI TCCNGGA 1 cut(s) 242
PleI GAGTC 3 cut(s) 69, 388, 445
PpsI GAGTC 3 cut(s) 69, 388, 445
PspPI GGNCC 1 cut(s) 439
RsaI GTAC 1 cut(s) 384
RsaNI GTAC 1 cut(s) 383
Sau96I GGNCC 1 cut(s) 439
SchI GAGTC 3 cut(s) 69, 388, 445
ScrFI CCNGG 1 cut(s) 244
SetI ASST 7 cut(s) 140, 193, 263, 318, 325, 392, 464
Sse9I AATT 4 cut(s) 38, 163, 218, 349
SseBI AGGCCT 1 cut(s) 203
SsiI CCGC 1 cut(s) 455
SspMI CTAG 1 cut(s) 463
StuI AGGCCT 1 cut(s) 203
StyD4I CCNGG 1 cut(s) 242
TaaI ACNGT 1 cut(s) 376
TaiI ACGT 1 cut(s) 263
TaqI TCGA 2 cut(s) 363, 392
TasI AATT 4 cut(s) 38, 163, 218, 349
TatI WGTACW 1 cut(s) 382
TfiI GAWTC 3 cut(s) 12, 247, 360
TscAI CASTG 1 cut(s) 187
TseFI GTSAC 1 cut(s) 276
Tsp45I GTSAC 1 cut(s) 276
TspDTI ATGAA 4 cut(s) 15, 289, 317, 381
TspRI CASTG 1 cut(s) 187
XapI RAATTY 2 cut(s) 38, 218
XceI RCATGY 1 cut(s) 296
XspI CTAG 1 cut(s) 463
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.