Rmu_sc0007504.1_g000001

subtilisin-like protease

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007504.1
N/A
Physical Location & Seq
Reverse (-)
2 .. 171
170 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 170 bp
atgagatatgagcttcatacaactcagacaccggagtttcttcgattaacaggacaatatgaagctgtcatcccagcatcaggcaatgtgagtaaggtggtcatcggacttgtagacactggtgtatggcctgagagcaaaagctgcaatgacaagggtcttgcacctgt
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

57

Amino Acids

6.2

Weight (kDa)

5.6

Isoelectric Point (pI)

14.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 114
AfiI CCNNNNNNNGG 1 cut(s) 80
AluBI AGCT 3 cut(s) 13, 65, 144
AluI AGCT 3 cut(s) 13, 65, 144
AoxI GGCC 1 cut(s) 128
ApeKI GCWGC 1 cut(s) 144
BbvI GCAGC 1 cut(s) 131
BisI GCNGC 1 cut(s) 145
BlsI GCNGC 1 cut(s) 146
BmsI GCATC 1 cut(s) 86
BoxI GACNNNNGTC 1 cut(s) 156
BsaWI WCCGGW 1 cut(s) 31
Bsc4I CCNNNNNNNGG 1 cut(s) 80
Bse1I ACTGG 1 cut(s) 124
Bse3DI GCAATG 2 cut(s) 91, 154
BseGI GGATG 1 cut(s) 69
BseLI CCNNNNNNNGG 1 cut(s) 80
BseMI GCAATG 2 cut(s) 91, 154
BseMII CTCAG 2 cut(s) 38, 123
BseNI ACTGG 1 cut(s) 124
BseXI GCAGC 1 cut(s) 131
BseYI CCCAGC 1 cut(s) 73
BshFI GGCC 1 cut(s) 130
BsiSI CCGG 1 cut(s) 32
BslI CCNNNNNNNGG 1 cut(s) 80
BsnI GGCC 1 cut(s) 130
BspANI GGCC 1 cut(s) 130
BspCNI CTCAG 2 cut(s) 37, 124
BsrDI GCAATG 2 cut(s) 91, 154
BsrI ACTGG 1 cut(s) 124
BstAPI GCANNNNNTGC 1 cut(s) 144
BstDEI CTNAG 2 cut(s) 24, 132
BstF5I GGATG 1 cut(s) 69
BstMWI GCNNNNNNNGC 1 cut(s) 144
BstPAI GACNNNNGTC 1 cut(s) 156
BstV1I GCAGC 1 cut(s) 131
BsuRI GGCC 1 cut(s) 130
BtsCI GGATG 1 cut(s) 69
BtsIMutI CAGTG 1 cut(s) 117
CviJI RGCY 4 cut(s) 13, 65, 130, 144
CviKI_1 RGCY 4 cut(s) 13, 65, 130, 144
DdeI CTNAG 2 cut(s) 24, 132
FaiI YATR 4 cut(s) 9, 18, 60, 127
FblI GTMKAC 1 cut(s) 114
Fnu4HI GCNGC 1 cut(s) 145
FokI GGATG 1 cut(s) 56
Fsp4HI GCNGC 1 cut(s) 145
GluI GCNGC 1 cut(s) 145
GsaI CCCAGC 1 cut(s) 77
HaeIII GGCC 1 cut(s) 130
HapII CCGG 1 cut(s) 32
HpaII CCGG 1 cut(s) 32
Hpy166II GTNNAC 1 cut(s) 115
Hpy188I TCNGA 2 cut(s) 27, 107
Hpy8I GTNNAC 1 cut(s) 115
HpyCH4V TGCA 2 cut(s) 147, 164
HpyF10VI GCNNNNNNNGC 1 cut(s) 144
HpyF3I CTNAG 2 cut(s) 24, 132
LpnPI CCDG 6 cut(s) 36, 45, 66, 87, 105, 144
Lsp1109I GCAGC 1 cut(s) 131
LweI GCATC 1 cut(s) 86
MboII GAAGA 1 cut(s) 32
MseI TTAA 1 cut(s) 47
MspI CCGG 1 cut(s) 32
MwoI GCNNNNNNNGC 1 cut(s) 144
PkrI GCNGC 1 cut(s) 146
PshAI GACNNNNGTC 1 cut(s) 156
PspFI CCCAGC 1 cut(s) 73
SaqAI TTAA 1 cut(s) 47
SatI GCNGC 1 cut(s) 145
SetI ASST 5 cut(s) 15, 67, 99, 146, 169
SfaNI GCATC 1 cut(s) 86
SgeI CNNG 8 cut(s) 44, 63, 86, 93, 122, 132, 143, 166
TaqI TCGA 1 cut(s) 43
Tru1I TTAA 1 cut(s) 47
Tru9I TTAA 1 cut(s) 47
TscAI CASTG 1 cut(s) 124
TseI GCWGC 1 cut(s) 144
TspDTI ATGAA 2 cut(s) 5, 75
TspRI CASTG 1 cut(s) 124
XmiI GTMKAC 1 cut(s) 114
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.