Rmu_sc0007518.1_g000001

Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007518.1
N/A
Physical Location & Seq
Reverse (-)
5067 .. 10220
5154 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 825 bp
atgctgaacgggggtgctgacgtggcagtgggtcctgctgctgacgtggcttgtgctgacgtgtcagtgggtccctatgctgacgtggctgtgggtcctcttgatgacgtggcaatgggcctctgccttgggcttctgggcttcttttcctttccttttttttatttttcttttccttctgcagagcttccggtagccagttcggtttccggccggttcttggggtggggccgtctgttctggactcctgggattgagttcttgaaggtgaccagtcccccattggaggaactcgaccttggtgagaagcaaaagacccaagtcccaaagatcaacaacgtgtacactcaagatttagtgctatatccattattcattgcagacgtagtgatggttaaatcaaagaaagcccatcttcagttgtttactttcactctttttcttctgtcctggcaccccatcaaacccgtcagaggcgaaggagcggaagaaatagagtatggttataggcaagggagcctttttggtgcagtggaagaaatagagtatgataataggcaagggacccattttggtgcagtggaagtaatggtgtataattatagggaagggagccccaagggaccagagcactggggagagctcaacgaagaaatggagaaatgcaaagatggaaaattacaatcgccaatagatttgttcgattcgaatgctagaaaagcaatctcaagagtagatgatcttaacatgagctataagccttcaaaagcaactatgaagcttgaacaccatgctatttcggtatggaaatatggaagtgcctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00910 map00910
Pfam Domains
Protein Families
Carb_anhydrase

Protein Analysis

274

Amino Acids

30.33

Weight (kDa)

5.12

Isoelectric Point (pI)

36.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 453
AccBSI CCGCTC 1 cut(s) 485
AciI CCGC 1 cut(s) 485
AcoI YGGCCR 1 cut(s) 211
AcuI CTGAAG 1 cut(s) 401
AfaI GTAC 1 cut(s) 344
AfiI CCNNNNNNNGG 3 cut(s) 220, 286, 473
AflIII ACRYGT 2 cut(s) 60, 339
AgsI TTSAA 3 cut(s) 265, 765, 785
AjiI CACGTC 5 cut(s) 22, 46, 61, 85, 109
AjnI CCWGG 2 cut(s) 247, 449
AjuI GAANNNNNNNTTGG 2 cut(s) 282, 314
AluBI AGCT 4 cut(s) 187, 643, 753, 781
AluI AGCT 4 cut(s) 187, 643, 753, 781
Alw21I GWGCWC 2 cut(s) 633, 645
AoxI GGCC 3 cut(s) 118, 211, 229
ApeKI GCWGC 1 cut(s) 38
AspS9I GGNCC 7 cut(s) 32, 71, 95, 118, 229, 564, 623
AsuHPI GGTGA 2 cut(s) 280, 314
AsuII TTCGAA 1 cut(s) 707
AvaII GGWCC 5 cut(s) 32, 71, 95, 564, 623
BanI GGYRCC 1 cut(s) 453
BanII GRGCYC 2 cut(s) 617, 645
Bbv12I GWGCWC 2 cut(s) 633, 645
BbvI GCAGC 1 cut(s) 25
BccI CCATC 4 cut(s) 385, 420, 467, 665
BceAI ACGGC 1 cut(s) 216
BcgI CGANNNNNNTGC 2 cut(s) 692, 726
BciT130I CCWGG 2 cut(s) 249, 451
BfaI CTAG 2 cut(s) 714, 823
BfmI CTRYAG 1 cut(s) 180
BisI GCNGC 1 cut(s) 39
BlsI GCNGC 1 cut(s) 40
Bme1390I CCNGG 2 cut(s) 249, 451
Bme18I GGWCC 5 cut(s) 32, 71, 95, 564, 623
BmgBI CACGTC 5 cut(s) 22, 46, 61, 85, 109
BmgT120I GGNCC 7 cut(s) 32, 71, 95, 118, 229, 564, 623
BmrFI CCNGG 2 cut(s) 249, 451
BmrI ACTGGG 1 cut(s) 643
BmuI ACTGGG 1 cut(s) 643
BoxI GACNNNNGTC 1 cut(s) 320
Bpu14I TTCGAA 1 cut(s) 707
BpuEI CTTGAG 2 cut(s) 333, 712
BsaJI CCNNGG 4 cut(s) 127, 248, 298, 618
BsaWI WCCGGW 1 cut(s) 190
Bsc4I CCNNNNNNNGG 3 cut(s) 220, 286, 473
Bse118I RCCGGY 1 cut(s) 213
Bse1I ACTGG 3 cut(s) 198, 273, 638
Bse3DI GCAATG 2 cut(s) 120, 375
BseBI CCWGG 2 cut(s) 249, 451
BseDI CCNNGG 4 cut(s) 127, 248, 298, 618
BseLI CCNNNNNNNGG 3 cut(s) 220, 286, 473
BseMI GCAATG 2 cut(s) 120, 375
BseNI ACTGG 3 cut(s) 198, 273, 638
BseX3I CGGCCG 1 cut(s) 211
BseXI GCAGC 1 cut(s) 25
BsgI GTGCAG 2 cut(s) 549, 597
Bsh1285I CGRYCG 1 cut(s) 214
BshFI GGCC 3 cut(s) 120, 213, 231
BshNI GGYRCC 1 cut(s) 453
BsiEI CGRYCG 1 cut(s) 214
BsiHKAI GWGCWC 2 cut(s) 633, 645
BsiSI CCGG 3 cut(s) 191, 210, 214
BslFI GGGAC 5 cut(s) 57, 261, 308, 577, 636
BslI CCNNNNNNNGG 3 cut(s) 220, 286, 473
BsmFI GGGAC 5 cut(s) 57, 261, 308, 577, 636
BsmI GAATGC 1 cut(s) 715
BsnI GGCC 3 cut(s) 120, 213, 231
Bsp119I TTCGAA 1 cut(s) 707
Bsp1286I GDGCHC 3 cut(s) 617, 633, 645
Bsp1407I TGTACA 1 cut(s) 342
Bsp143I GATC 2 cut(s) 330, 739
BspACI CCGC 1 cut(s) 485
BspANI GGCC 3 cut(s) 120, 213, 231
BspMAI CTGCAG 1 cut(s) 184
BspT104I TTCGAA 1 cut(s) 707
BspT107I GGYRCC 1 cut(s) 453
BsrBI CCGCTC 1 cut(s) 485
BsrDI GCAATG 2 cut(s) 120, 375
BsrFI RCCGGY 1 cut(s) 213
BsrGI TGTACA 1 cut(s) 342
BsrI ACTGG 3 cut(s) 198, 273, 638
BssAI RCCGGY 1 cut(s) 213
BssECI CCNNGG 4 cut(s) 127, 248, 298, 618
BssMI GATC 2 cut(s) 330, 739
BssT1I CCWWGG 3 cut(s) 127, 298, 618
Bst2UI CCWGG 2 cut(s) 249, 451
BstAUI TGTACA 1 cut(s) 342
BstBI TTCGAA 1 cut(s) 707
BstEII GGTNACC 1 cut(s) 268
BstKTI GATC 2 cut(s) 333, 742
BstMBI GATC 2 cut(s) 330, 739
BstMCI CGRYCG 1 cut(s) 214
BstMWI GCNNNNNNNGC 4 cut(s) 23, 47, 86, 719
BstNI CCWGG 2 cut(s) 249, 451
BstPAI GACNNNNGTC 1 cut(s) 320
BstPI GGTNACC 1 cut(s) 268
BstSCI CCNGG 2 cut(s) 247, 449
BstSFI CTRYAG 1 cut(s) 180
BstV1I GCAGC 1 cut(s) 25
BstXI CCANNNNNNTGG 1 cut(s) 633
BstZI CGGCCG 1 cut(s) 211
BsuRI GGCC 3 cut(s) 120, 213, 231
BtrI CACGTC 5 cut(s) 22, 46, 61, 85, 109
BtsI GCAGTG 3 cut(s) 33, 537, 585
BtsIMutI CAGTG 5 cut(s) 33, 72, 537, 585, 631
Cfr10I RCCGGY 1 cut(s) 213
Cfr13I GGNCC 7 cut(s) 32, 71, 95, 118, 229, 564, 623
Csp6I GTAC 1 cut(s) 343
CviAII CATG 2 cut(s) 748, 791
CviQI GTAC 1 cut(s) 343
DpnI GATC 2 cut(s) 332, 741
DpnII GATC 2 cut(s) 330, 739
EaeI YGGCCR 1 cut(s) 211
EagI CGGCCG 1 cut(s) 211
Ecl136II GAGCTC 1 cut(s) 643
EclXI CGGCCG 1 cut(s) 211
Eco130I CCWWGG 3 cut(s) 127, 298, 618
Eco24I GRGCYC 2 cut(s) 617, 645
Eco47I GGWCC 5 cut(s) 32, 71, 95, 564, 623
Eco52I CGGCCG 1 cut(s) 211
Eco53kI GAGCTC 1 cut(s) 643
Eco57I CTGAAG 1 cut(s) 401
Eco91I GGTNACC 1 cut(s) 268
EcoICRI GAGCTC 1 cut(s) 643
EcoO109I RGGNCCY 4 cut(s) 32, 71, 95, 564
EcoO65I GGTNACC 1 cut(s) 268
EcoRII CCWGG 2 cut(s) 247, 449
EcoT14I CCWWGG 3 cut(s) 127, 298, 618
EcoT38I GRGCYC 2 cut(s) 617, 645
ErhI CCWWGG 3 cut(s) 127, 298, 618
FaeI CATG 2 cut(s) 751, 794
FalI AAGNNNNNCTT 4 cut(s) 399, 431, 504, 536
FaqI GGGAC 5 cut(s) 57, 261, 308, 577, 636
FatI CATG 2 cut(s) 747, 790
Fnu4HI GCNGC 1 cut(s) 39
FriOI GRGCYC 2 cut(s) 617, 645
Fsp4HI GCNGC 1 cut(s) 39
FspBI CTAG 2 cut(s) 714, 823
GluI GCNGC 1 cut(s) 39
HaeIII GGCC 3 cut(s) 120, 213, 231
HapII CCGG 3 cut(s) 191, 210, 214
Hin1II CATG 2 cut(s) 751, 794
HindIII AAGCTT 1 cut(s) 779
HinfI GANTC 2 cut(s) 244, 704
HpaII CCGG 3 cut(s) 191, 210, 214
HphI GGTGA 2 cut(s) 280, 314
Hpy166II GTNNAC 3 cut(s) 343, 345, 426
Hpy188I TCNGA 1 cut(s) 473
Hpy188III TCNNGA 5 cut(s) 101, 241, 262, 350, 729
Hpy8I GTNNAC 3 cut(s) 343, 345, 426
HpyAV CCTTC 5 cut(s) 186, 259, 473, 602, 771
HpyCH4IV ACGT 7 cut(s) 21, 45, 60, 84, 108, 339, 384
HpyCH4V TGCA 5 cut(s) 182, 380, 530, 578, 666
HpyF10VI GCNNNNNNNGC 4 cut(s) 23, 47, 86, 719
HpySE526I ACGT 7 cut(s) 21, 45, 60, 84, 108, 339, 384
Hsp92II CATG 2 cut(s) 751, 794
KflI GGGWCCC 2 cut(s) 71, 564
Kzo9I GATC 2 cut(s) 330, 739
LmnI GCTCC 3 cut(s) 482, 516, 612
Lsp1109I GCAGC 1 cut(s) 25
MaeI CTAG 2 cut(s) 714, 823
MaeII ACGT 7 cut(s) 21, 45, 60, 84, 108, 339, 384
MaeIII GTNAC 1 cut(s) 268
MalI GATC 2 cut(s) 332, 741
MbiI CCGCTC 1 cut(s) 485
MboI GATC 2 cut(s) 330, 739
MboII GAAGA 5 cut(s) 407, 434, 500, 548, 662
MhlI GDGCHC 3 cut(s) 617, 633, 645
MluCI AATT 2 cut(s) 598, 677
MlyI GAGTC 1 cut(s) 238
MnlI CCTC 4 cut(s) 108, 131, 280, 467
MseI TTAA 2 cut(s) 396, 744
MslI CAYNNNNRTG 1 cut(s) 573
MspI CCGG 3 cut(s) 191, 210, 214
MspR9I CCNGG 2 cut(s) 249, 451
Mva1269I GAATGC 1 cut(s) 715
MvaI CCWGG 2 cut(s) 249, 451
MwoI GCNNNNNNNGC 4 cut(s) 23, 47, 86, 719
NdeII GATC 2 cut(s) 330, 739
NlaIII CATG 2 cut(s) 751, 794
NmuCI GTSAC 1 cut(s) 268
NspV TTCGAA 1 cut(s) 707
PctI GAATGC 1 cut(s) 715
PfeI GAWTC 1 cut(s) 704
PkrI GCNGC 1 cut(s) 40
PleI GAGTC 1 cut(s) 238
PpsI GAGTC 1 cut(s) 238
PpuMI RGGWCCY 4 cut(s) 32, 71, 95, 564
PshAI GACNNNNGTC 1 cut(s) 320
Psp124BI GAGCTC 1 cut(s) 645
Psp5II RGGWCCY 4 cut(s) 32, 71, 95, 564
Psp6I CCWGG 2 cut(s) 247, 449
PspEI GGTNACC 1 cut(s) 268
PspGI CCWGG 2 cut(s) 247, 449
PspPI GGNCC 7 cut(s) 32, 71, 95, 118, 229, 564, 623
PspPPI RGGWCCY 4 cut(s) 32, 71, 95, 564
PstI CTGCAG 1 cut(s) 184
RsaI GTAC 1 cut(s) 344
RsaNI GTAC 1 cut(s) 343
RseI CAYNNNNRTG 1 cut(s) 573
SacI GAGCTC 1 cut(s) 645
SaqAI TTAA 2 cut(s) 396, 744
SatI GCNGC 1 cut(s) 39
Sau3AI GATC 2 cut(s) 330, 739
Sau96I GGNCC 7 cut(s) 32, 71, 95, 118, 229, 564, 623
SchI GAGTC 1 cut(s) 238
ScrFI CCNGG 2 cut(s) 249, 451
SduI GDGCHC 3 cut(s) 617, 633, 645
SfcI CTRYAG 1 cut(s) 180
SfuI TTCGAA 1 cut(s) 707
SinI GGWCC 5 cut(s) 32, 71, 95, 564, 623
SmiMI CAYNNNNRTG 1 cut(s) 573
SmlI CTYRAG 2 cut(s) 348, 727
SmoI CTYRAG 2 cut(s) 348, 727
Sse9I AATT 2 cut(s) 598, 677
SsiI CCGC 1 cut(s) 485
SspMI CTAG 2 cut(s) 714, 823
SstI GAGCTC 1 cut(s) 645
StyD4I CCNGG 2 cut(s) 247, 449
StyI CCWWGG 3 cut(s) 127, 298, 618
TaiI ACGT 7 cut(s) 24, 48, 63, 87, 111, 342, 387
TaqI TCGA 3 cut(s) 294, 702, 707
TasI AATT 2 cut(s) 598, 677
TatI WGTACW 1 cut(s) 342
TfiI GAWTC 1 cut(s) 704
Tru1I TTAA 2 cut(s) 396, 744
Tru9I TTAA 2 cut(s) 396, 744
TscAI CASTG 5 cut(s) 33, 72, 537, 585, 638
TseFI GTSAC 1 cut(s) 268
TseI GCWGC 1 cut(s) 38
Tsp45I GTSAC 1 cut(s) 268
TspDTI ATGAA 2 cut(s) 364, 791
TspRI CASTG 5 cut(s) 33, 72, 537, 585, 638
VpaK11BI GGWCC 5 cut(s) 32, 71, 95, 564, 623
XcmI CCANNNNNNNNNTGG 1 cut(s) 280
XspI CTAG 2 cut(s) 714, 823
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.