Rmu_sc0009820.1_g000001

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009820.1
N/A
Physical Location & Seq
Forward (+)
1 .. 640
640 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009820.1_g000001.1.cds

Sequence Viewer

Length: 382 bp
ggcgttgatggtgtcggcgacctcctgccaggcggagattactgcgaagtatatcaagtacagagatatggcttggacacttgggcttgagtttcttcctgccggcctgcccaagagcttttcatacgccgagttgaatgcagccactaaaaacttttcaaatttgatcgggaaaggtgggtttggggatgattacaaaggagagcagatggatcagagggtggtggtggtcaagtgtttgaaacacgtggccggtagcgatgccgagttttgggcgaaggtaacgattattgcacagatgcatttctttcaagaagatgaagctaattgtaccttctgtttgatttatttatttattttaaatttggatggagcttcttag

Protein Analysis

126

Amino Acids

13.96

Weight (kDa)

5.27

Isoelectric Point (pI)

26.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 33
AclWI GGATC 1 cut(s) 220
AcoI YGGCCR 1 cut(s) 250
AcsI RAATTY 2 cut(s) 161, 362
AcvI CACGTG 1 cut(s) 248
AfaI GTAC 2 cut(s) 60, 332
AfiI CCNNNNNNNGG 1 cut(s) 271
AflIII ACRYGT 1 cut(s) 245
AgsI TTSAA 4 cut(s) 137, 160, 242, 312
AjnI CCWGG 1 cut(s) 28
AluBI AGCT 3 cut(s) 118, 324, 375
AluI AGCT 3 cut(s) 118, 324, 375
AlwI GGATC 1 cut(s) 220
AoxI GGCC 2 cut(s) 104, 250
ApeKI GCWGC 1 cut(s) 141
ApoI RAATTY 2 cut(s) 161, 362
BbrPI CACGTG 1 cut(s) 248
BbvI GCAGC 1 cut(s) 153
BccI CCATC 3 cut(s) 2, 203, 363
BcgI CGANNNNNNTGC 2 cut(s) 120, 154
BciT130I CCWGG 1 cut(s) 30
BisI GCNGC 1 cut(s) 142
BlsI GCNGC 1 cut(s) 143
Bme1390I CCNGG 1 cut(s) 30
BmrFI CCNGG 1 cut(s) 30
BmsI GCATC 2 cut(s) 251, 289
BpuEI CTTGAG 1 cut(s) 108
BsaAI YACGTR 1 cut(s) 248
Bsc4I CCNNNNNNNGG 1 cut(s) 271
Bse118I RCCGGY 2 cut(s) 102, 252
BseBI CCWGG 1 cut(s) 30
BseGI GGATG 2 cut(s) 194, 374
BseLI CCNNNNNNNGG 1 cut(s) 271
BseXI GCAGC 1 cut(s) 153
BshFI GGCC 2 cut(s) 106, 252
BsiSI CCGG 2 cut(s) 103, 253
BslI CCNNNNNNNGG 1 cut(s) 271
BsmI GAATGC 1 cut(s) 143
BsnI GGCC 2 cut(s) 106, 252
Bsp143I GATC 2 cut(s) 166, 212
BspACI CCGC 1 cut(s) 33
BspANI GGCC 2 cut(s) 106, 252
BspPI GGATC 1 cut(s) 220
BsrFI RCCGGY 2 cut(s) 102, 252
BssAI RCCGGY 2 cut(s) 102, 252
BssMI GATC 2 cut(s) 166, 212
Bst2UI CCWGG 1 cut(s) 30
BstBAI YACGTR 1 cut(s) 248
BstC8I GCNNGC 2 cut(s) 104, 108
BstDEI CTNAG 1 cut(s) 379
BstF5I GGATG 2 cut(s) 194, 374
BstKTI GATC 2 cut(s) 169, 215
BstMBI GATC 2 cut(s) 166, 212
BstNI CCWGG 1 cut(s) 30
BstSCI CCNGG 1 cut(s) 28
BstV1I GCAGC 1 cut(s) 153
BsuRI GGCC 2 cut(s) 106, 252
BtgZI GCGATG 1 cut(s) 274
BtsCI GGATG 2 cut(s) 194, 374
Cac8I GCNNGC 2 cut(s) 104, 108
Cfr10I RCCGGY 2 cut(s) 102, 252
Csp6I GTAC 2 cut(s) 59, 331
CviJI RGCY 8 cut(s) 72, 86, 106, 118, 144, 252, 324, 375
CviKI_1 RGCY 8 cut(s) 72, 86, 106, 118, 144, 252, 324, 375
CviQI GTAC 2 cut(s) 59, 331
DdeI CTNAG 1 cut(s) 379
DpnI GATC 2 cut(s) 168, 214
DpnII GATC 2 cut(s) 166, 212
DraI TTTAAA 1 cut(s) 361
EaeI YGGCCR 1 cut(s) 250
EciI GGCGGA 1 cut(s) 48
Eco72I CACGTG 1 cut(s) 248
EcoRII CCWGG 1 cut(s) 28
EcoT22I ATGCAT 1 cut(s) 304
FaiI YATR 3 cut(s) 52, 69, 125
Fnu4HI GCNGC 1 cut(s) 142
FokI GGATG 1 cut(s) 201
Fsp4HI GCNGC 1 cut(s) 142
GluI GCNGC 1 cut(s) 142
HaeIII GGCC 2 cut(s) 106, 252
HapII CCGG 2 cut(s) 103, 253
HpaII CCGG 2 cut(s) 103, 253
Hpy188I TCNGA 1 cut(s) 217
Hpy188III TCNNGA 2 cut(s) 170, 312
HpyAV CCTTC 2 cut(s) 272, 344
HpyCH4IV ACGT 1 cut(s) 247
HpyCH4V TGCA 3 cut(s) 141, 294, 302
HpyF3I CTNAG 1 cut(s) 379
HpySE526I ACGT 1 cut(s) 247
KroI GCCGGC 1 cut(s) 102
KroNI GCCGGC 1 cut(s) 104
Kzo9I GATC 2 cut(s) 166, 212
LmnI GCTCC 1 cut(s) 372
LpnPI CCDG 7 cut(s) 15, 38, 42, 112, 116, 120, 266
Lsp1109I GCAGC 1 cut(s) 153
LweI GCATC 2 cut(s) 251, 289
MaeII ACGT 1 cut(s) 247
MaeIII GTNAC 1 cut(s) 281
MalI GATC 2 cut(s) 168, 214
MboI GATC 2 cut(s) 166, 212
MboII GAAGA 2 cut(s) 87, 327
MluCI AATT 3 cut(s) 161, 326, 362
MnlI CCTC 2 cut(s) 32, 211
Mph1103I ATGCAT 1 cut(s) 304
MroNI GCCGGC 1 cut(s) 102
MseI TTAA 1 cut(s) 360
MspI CCGG 2 cut(s) 103, 253
MspR9I CCNGG 1 cut(s) 30
Mva1269I GAATGC 1 cut(s) 143
MvaI CCWGG 1 cut(s) 30
NaeI GCCGGC 1 cut(s) 104
NdeII GATC 2 cut(s) 166, 212
NgoMIV GCCGGC 1 cut(s) 102
NmeAIII GCCGAG 2 cut(s) 155, 290
NsiI ATGCAT 1 cut(s) 304
PctI GAATGC 1 cut(s) 143
PdiI GCCGGC 1 cut(s) 104
PkrI GCNGC 1 cut(s) 143
PmaCI CACGTG 1 cut(s) 248
PmlI CACGTG 1 cut(s) 248
Ppu21I YACGTR 1 cut(s) 248
Psp6I CCWGG 1 cut(s) 28
PspCI CACGTG 1 cut(s) 248
PspGI CCWGG 1 cut(s) 28
RsaI GTAC 2 cut(s) 60, 332
RsaNI GTAC 2 cut(s) 59, 331
SaqAI TTAA 1 cut(s) 360
SatI GCNGC 1 cut(s) 142
Sau3AI GATC 2 cut(s) 166, 212
ScrFI CCNGG 1 cut(s) 30
SetI ASST 8 cut(s) 24, 120, 179, 250, 283, 326, 336, 377
SfaNI GCATC 2 cut(s) 251, 289
SmlI CTYRAG 1 cut(s) 87
SmoI CTYRAG 1 cut(s) 87
Sse9I AATT 3 cut(s) 161, 326, 362
SsiI CCGC 1 cut(s) 33
StyD4I CCNGG 1 cut(s) 28
TaiI ACGT 1 cut(s) 250
TasI AATT 3 cut(s) 161, 326, 362
TatI WGTACW 1 cut(s) 58
Tru1I TTAA 1 cut(s) 360
Tru9I TTAA 1 cut(s) 360
TseI GCWGC 1 cut(s) 141
TspDTI ATGAA 2 cut(s) 112, 334
XapI RAATTY 2 cut(s) 161, 362
Zsp2I ATGCAT 1 cut(s) 304
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.