Rmu_sc0011796.1_g000008
NAC Family

inactive receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011796.1
N/A
Physical Location & Seq
Reverse (-)
32136 .. 32462
327 bp
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UTR
Exon/CDS
Intron
Rmu_sc0011796.1_g000008.1.cds

Sequence Viewer

Length: 327 bp
atgtgtatgcatatggtatttaatttactggtggagcttctcacgggaaggcctccgtcacagaacttagtttcggtgcccccaaatgacatgatgcaatgggtgaggtctgtgagggaagaatcagatcatgatggtggtggtggtgattcagaagagactagtaataagatgggaatgctgctggaggtggccataacttgtagaacagcgtcgccggagcagagaccgactatgtggcaggttttgaagatgttgcaggagattaaagagaatgtggccgcggatgaaactgagaccgagttaatgggatcatgtcctcgctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

108

Amino Acids

12.11

Weight (kDa)

4.61

Isoelectric Point (pI)

73.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 232
AccB1I GGYRCC 1 cut(s) 76
AccII CGCG 1 cut(s) 284
AciI CCGC 2 cut(s) 282, 284
AclWI GGATC 1 cut(s) 319
AcoI YGGCCR 2 cut(s) 192, 279
AgsI TTSAA 1 cut(s) 250
AhlI ACTAGT 1 cut(s) 161
AluBI AGCT 1 cut(s) 37
AluI AGCT 1 cut(s) 37
Alw26I GTCTC 3 cut(s) 152, 220, 290
AlwI GGATC 1 cut(s) 319
AoxI GGCC 3 cut(s) 50, 192, 279
ApeKI GCWGC 1 cut(s) 181
AsuHPI GGTGA 2 cut(s) 115, 158
BaeGI GKGCMC 1 cut(s) 81
BalI TGGCCA 1 cut(s) 194
BanI GGYRCC 1 cut(s) 76
BbvI GCAGC 1 cut(s) 168
BccI CCATC 2 cut(s) 128, 166
BcoDI GTCTC 3 cut(s) 152, 220, 290
BcuI ACTAGT 1 cut(s) 161
BfaI CTAG 2 cut(s) 162, 325
BfuAI ACCTGC 1 cut(s) 232
BisI GCNGC 2 cut(s) 182, 282
BlsI GCNGC 2 cut(s) 183, 283
BmiI GGNNCC 1 cut(s) 78
BmsI GCATC 1 cut(s) 84
BpmI CTGGAG 1 cut(s) 206
BsaI GGTCTC 2 cut(s) 220, 290
BsaJI CCNNGG 1 cut(s) 282
Bse1I ACTGG 1 cut(s) 33
Bse3DI GCAATG 1 cut(s) 104
BseDI CCNNGG 1 cut(s) 282
BseGI GGATG 1 cut(s) 292
BseMI GCAATG 1 cut(s) 104
BseMII CTCAG 1 cut(s) 285
BseNI ACTGG 1 cut(s) 33
BseSI GKGCMC 1 cut(s) 81
BseXI GCAGC 1 cut(s) 168
Bsh1236I CGCG 1 cut(s) 284
BshFI GGCC 3 cut(s) 52, 194, 281
BshNI GGYRCC 1 cut(s) 76
BsiSI CCGG 1 cut(s) 218
BsmAI GTCTC 3 cut(s) 152, 220, 290
BsmI GAATGC 1 cut(s) 183
BsnI GGCC 3 cut(s) 52, 194, 281
Bso31I GGTCTC 2 cut(s) 220, 290
Bsp1286I GDGCHC 1 cut(s) 81
Bsp143I GATC 2 cut(s) 127, 311
BspACI CCGC 2 cut(s) 282, 284
BspANI GGCC 3 cut(s) 52, 194, 281
BspCNI CTCAG 1 cut(s) 286
BspFNI CGCG 1 cut(s) 284
BspHI TCATGA 1 cut(s) 130
BspLI GGNNCC 1 cut(s) 78
BspMI ACCTGC 1 cut(s) 232
BspPI GGATC 1 cut(s) 319
BspT107I GGYRCC 1 cut(s) 76
BspTNI GGTCTC 2 cut(s) 220, 290
BsrDI GCAATG 1 cut(s) 104
BsrI ACTGG 1 cut(s) 33
BssECI CCNNGG 1 cut(s) 282
BssMI GATC 2 cut(s) 127, 311
Bst6I CTCTTC 1 cut(s) 150
BstDEI CTNAG 2 cut(s) 67, 294
BstDSI CCRYGG 1 cut(s) 282
BstF5I GGATG 1 cut(s) 292
BstFNI CGCG 1 cut(s) 284
BstKTI GATC 2 cut(s) 130, 314
BstMAI GTCTC 3 cut(s) 152, 220, 290
BstMBI GATC 2 cut(s) 127, 311
BstSLI GKGCMC 1 cut(s) 81
BstUI CGCG 1 cut(s) 284
BstV1I GCAGC 1 cut(s) 168
BsuRI GGCC 3 cut(s) 52, 194, 281
BtgI CCRYGG 1 cut(s) 282
BtsCI GGATG 1 cut(s) 292
BveI ACCTGC 1 cut(s) 232
CciI TCATGA 1 cut(s) 130
Cfr42I CCGCGG 1 cut(s) 285
CseI GACGC 1 cut(s) 201
CviAII CATG 3 cut(s) 91, 131, 315
CviJI RGCY 4 cut(s) 37, 52, 194, 281
CviKI_1 RGCY 4 cut(s) 37, 52, 194, 281
DdeI CTNAG 2 cut(s) 67, 294
DpnI GATC 2 cut(s) 129, 313
DpnII GATC 2 cut(s) 127, 311
EaeI YGGCCR 2 cut(s) 192, 279
Eam1104I CTCTTC 1 cut(s) 150
EarI CTCTTC 1 cut(s) 150
Eco147I AGGCCT 1 cut(s) 52
Eco31I GGTCTC 2 cut(s) 220, 290
EcoT22I ATGCAT 1 cut(s) 12
FaeI CATG 3 cut(s) 94, 134, 318
FaiI YATR 8 cut(s) 8, 12, 14, 92, 132, 197, 236, 316
FatI CATG 3 cut(s) 90, 130, 314
FauNDI CATATG 1 cut(s) 12
Fnu4HI GCNGC 2 cut(s) 182, 282
FokI GGATG 1 cut(s) 299
Fsp4HI GCNGC 2 cut(s) 182, 282
FspBI CTAG 2 cut(s) 162, 325
GluI GCNGC 2 cut(s) 182, 282
GsuI CTGGAG 1 cut(s) 206
HaeIII GGCC 3 cut(s) 52, 194, 281
HapII CCGG 1 cut(s) 218
HgaI GACGC 1 cut(s) 201
Hin1II CATG 3 cut(s) 94, 134, 318
HinfI GANTC 2 cut(s) 122, 149
HpaII CCGG 1 cut(s) 218
HphI GGTGA 2 cut(s) 115, 158
Hpy188I TCNGA 2 cut(s) 127, 154
Hpy188III TCNNGA 1 cut(s) 131
Hpy99I CGWCG 1 cut(s) 217
HpyAV CCTTC 1 cut(s) 42
HpyCH4V TGCA 3 cut(s) 10, 97, 259
HpyF3I CTNAG 2 cut(s) 67, 294
Hsp92II CATG 3 cut(s) 94, 134, 318
KspI CCGCGG 1 cut(s) 285
Kzo9I GATC 2 cut(s) 127, 311
LmnI GCTCC 2 cut(s) 34, 220
LpnPI CCDG 5 cut(s) 14, 170, 227, 231, 245
Lsp1109I GCAGC 1 cut(s) 168
LweI GCATC 1 cut(s) 84
MaeI CTAG 2 cut(s) 162, 325
MaeIII GTNAC 1 cut(s) 57
MalI GATC 2 cut(s) 129, 313
MboI GATC 2 cut(s) 127, 311
MboII GAAGA 3 cut(s) 131, 167, 262
MhlI GDGCHC 1 cut(s) 81
MlsI TGGCCA 1 cut(s) 194
MluCI AATT 1 cut(s) 22
MluNI TGGCCA 1 cut(s) 194
MnlI CCTC 4 cut(s) 63, 99, 108, 181
Mox20I TGGCCA 1 cut(s) 194
Mph1103I ATGCAT 1 cut(s) 12
MscI TGGCCA 1 cut(s) 194
MseI TTAA 3 cut(s) 21, 267, 305
MslI CAYNNNNRTG 1 cut(s) 135
Msp20I TGGCCA 1 cut(s) 194
MspA1I CMGCKG 1 cut(s) 284
MspI CCGG 1 cut(s) 218
Mva1269I GAATGC 1 cut(s) 183
MvnI CGCG 1 cut(s) 284
NdeI CATATG 1 cut(s) 12
NdeII GATC 2 cut(s) 127, 311
NlaIII CATG 3 cut(s) 94, 134, 318
NlaIV GGNNCC 1 cut(s) 78
NmuCI GTSAC 1 cut(s) 57
NsiI ATGCAT 1 cut(s) 12
PagI TCATGA 1 cut(s) 130
PceI AGGCCT 1 cut(s) 52
PctI GAATGC 1 cut(s) 183
PfeI GAWTC 2 cut(s) 122, 149
PkrI GCNGC 2 cut(s) 183, 283
PspN4I GGNNCC 1 cut(s) 78
RseI CAYNNNNRTG 1 cut(s) 135
SacII CCGCGG 1 cut(s) 285
SaqAI TTAA 3 cut(s) 21, 267, 305
SatI GCNGC 2 cut(s) 182, 282
Sau3AI GATC 2 cut(s) 127, 311
SduI GDGCHC 1 cut(s) 81
SetI ASST 4 cut(s) 39, 110, 192, 246
SfaNI GCATC 1 cut(s) 84
Sfr303I CCGCGG 1 cut(s) 285
SgrBI CCGCGG 1 cut(s) 285
SmiMI CAYNNNNRTG 1 cut(s) 135
SpeI ACTAGT 1 cut(s) 161
Sse9I AATT 1 cut(s) 22
SseBI AGGCCT 1 cut(s) 52
SsiI CCGC 2 cut(s) 282, 284
SspMI CTAG 2 cut(s) 162, 325
StuI AGGCCT 1 cut(s) 52
TaqII GACCGA 2 cut(s) 244, 314
TasI AATT 1 cut(s) 22
TauI GCSGC 1 cut(s) 284
TfiI GAWTC 2 cut(s) 122, 149
Tru1I TTAA 3 cut(s) 21, 267, 305
Tru9I TTAA 3 cut(s) 21, 267, 305
TseFI GTSAC 1 cut(s) 57
TseI GCWGC 1 cut(s) 181
Tsp45I GTSAC 1 cut(s) 57
TspDTI ATGAA 1 cut(s) 303
TspGWI ACGGA 1 cut(s) 45
XspI CTAG 2 cut(s) 162, 325
Zsp2I ATGCAT 1 cut(s) 12
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.