Rmu_sc0011883.1_g000001
HSP70 Family

Heat shock cognate 70 kDa

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011883.1
N/A
Physical Location & Seq
Forward (+)
1650 .. 1934
285 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011883.1_g000001.1.cds

Sequence Viewer

Length: 285 bp
atggagcctgtggagaagcgtttgagggatgctaacatggacacaagcagtgttgatgacgttgttcttgttggtggctcttctagagttcccaaggtgcaagagttattgcagaatgtgttcaagggcaaggagctgtgcaagggcattaatcctgatgaggctgtagcatatggtgccgctattcatgccgcggtcttgagtggtgcgaatcaaattgggaagcttcaaaacttgagtctctcggatgtcacccctctatcacttgggtggagagttttgtag

Protein Analysis

94

Amino Acids

10.03

Weight (kDa)

5.71

Isoelectric Point (pI)

23.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 176
AccII CGCG 1 cut(s) 194
AciI CCGC 3 cut(s) 180, 192, 194
AgsI TTSAA 2 cut(s) 124, 230
AleI CACNNNNGTG 1 cut(s) 268
AluBI AGCT 2 cut(s) 136, 226
AluI AGCT 2 cut(s) 136, 226
Alw26I GTCTC 1 cut(s) 245
ArsI GACNNNNNNTTYG 2 cut(s) 223, 255
AseI ATTAAT 1 cut(s) 150
Asp700I GAANNNNTTC 1 cut(s) 119
AsuHPI GGTGA 1 cut(s) 244
BanI GGYRCC 1 cut(s) 176
BcoDI GTCTC 1 cut(s) 245
BfaI CTAG 1 cut(s) 84
BfmI CTRYAG 1 cut(s) 165
BisI GCNGC 2 cut(s) 180, 192
BlsI GCNGC 2 cut(s) 181, 193
BmiI GGNNCC 2 cut(s) 6, 178
BmsI GCATC 1 cut(s) 19
BpuEI CTTGAG 2 cut(s) 220, 256
BsaJI CCNNGG 2 cut(s) 93, 192
BseDI CCNNGG 2 cut(s) 93, 192
BseGI GGATG 2 cut(s) 34, 253
Bsh1236I CGCG 1 cut(s) 194
BshNI GGYRCC 1 cut(s) 176
BsmAI GTCTC 1 cut(s) 245
BspACI CCGC 3 cut(s) 180, 192, 194
BspFNI CGCG 1 cut(s) 194
BspLI GGNNCC 2 cut(s) 6, 178
BspQI GCTCTTC 1 cut(s) 85
BspT107I GGYRCC 1 cut(s) 176
BssECI CCNNGG 2 cut(s) 93, 192
BssT1I CCWWGG 1 cut(s) 93
Bst6I CTCTTC 1 cut(s) 85
BstAPI GCANNNNNTGC 1 cut(s) 176
BstDSI CCRYGG 1 cut(s) 192
BstF5I GGATG 2 cut(s) 34, 253
BstFNI CGCG 1 cut(s) 194
BstMAI GTCTC 1 cut(s) 245
BstMWI GCNNNNNNNGC 2 cut(s) 176, 188
BstSFI CTRYAG 1 cut(s) 165
BstUI CGCG 1 cut(s) 194
BtgI CCRYGG 1 cut(s) 192
BtsCI GGATG 2 cut(s) 34, 253
BtsI GCAGTG 1 cut(s) 55
BtsIMutI CAGTG 1 cut(s) 55
Cfr42I CCGCGG 1 cut(s) 195
CviAII CATG 2 cut(s) 37, 188
CviJI RGCY 5 cut(s) 7, 78, 136, 164, 226
CviKI_1 RGCY 5 cut(s) 7, 78, 136, 164, 226
Eam1104I CTCTTC 1 cut(s) 85
EarI CTCTTC 1 cut(s) 85
Eco130I CCWWGG 1 cut(s) 93
EcoT14I CCWWGG 1 cut(s) 93
ErhI CCWWGG 1 cut(s) 93
FaeI CATG 2 cut(s) 40, 191
FaiI YATR 4 cut(s) 38, 172, 174, 189
FatI CATG 2 cut(s) 36, 187
FauNDI CATATG 1 cut(s) 172
Fnu4HI GCNGC 2 cut(s) 180, 192
FokI GGATG 2 cut(s) 41, 260
Fsp4HI GCNGC 2 cut(s) 180, 192
FspBI CTAG 1 cut(s) 84
GluI GCNGC 2 cut(s) 180, 192
Hin1II CATG 2 cut(s) 40, 191
HindIII AAGCTT 1 cut(s) 224
HinfI GANTC 2 cut(s) 211, 238
HphI GGTGA 1 cut(s) 244
Hpy188I TCNGA 1 cut(s) 247
Hpy188III TCNNGA 3 cut(s) 84, 155, 199
HpyCH4IV ACGT 1 cut(s) 60
HpyCH4V TGCA 3 cut(s) 100, 112, 141
HpyF10VI GCNNNNNNNGC 2 cut(s) 176, 188
HpySE526I ACGT 1 cut(s) 60
Hsp92II CATG 2 cut(s) 40, 191
KspI CCGCGG 1 cut(s) 195
LguI GCTCTTC 1 cut(s) 85
LmnI GCTCC 2 cut(s) 4, 133
LpnPI CCDG 2 cut(s) 21, 168
LweI GCATC 1 cut(s) 19
MaeI CTAG 1 cut(s) 84
MaeII ACGT 1 cut(s) 60
MaeIII GTNAC 1 cut(s) 250
MboII GAAGA 1 cut(s) 72
MluCI AATT 1 cut(s) 216
MlyI GAGTC 1 cut(s) 247
MnlI CCTC 3 cut(s) 18, 154, 267
MroXI GAANNNNTTC 1 cut(s) 119
MseI TTAA 1 cut(s) 150
MslI CAYNNNNRTG 1 cut(s) 268
MspA1I CMGCKG 1 cut(s) 194
MvnI CGCG 1 cut(s) 194
MwoI GCNNNNNNNGC 2 cut(s) 176, 188
NdeI CATATG 1 cut(s) 172
NlaIII CATG 2 cut(s) 40, 191
NlaIV GGNNCC 2 cut(s) 6, 178
NmuCI GTSAC 1 cut(s) 250
OliI CACNNNNGTG 1 cut(s) 268
PciSI GCTCTTC 1 cut(s) 85
PdmI GAANNNNTTC 1 cut(s) 119
PfeI GAWTC 1 cut(s) 211
PkrI GCNGC 2 cut(s) 181, 193
PleI GAGTC 1 cut(s) 246
PpsI GAGTC 1 cut(s) 246
PshBI ATTAAT 1 cut(s) 150
PspN4I GGNNCC 2 cut(s) 6, 178
RseI CAYNNNNRTG 1 cut(s) 268
SacII CCGCGG 1 cut(s) 195
SapI GCTCTTC 1 cut(s) 85
SaqAI TTAA 1 cut(s) 150
SatI GCNGC 2 cut(s) 180, 192
SchI GAGTC 1 cut(s) 247
SetI ASST 4 cut(s) 63, 99, 138, 228
SfaNI GCATC 1 cut(s) 19
SfcI CTRYAG 1 cut(s) 165
Sfr303I CCGCGG 1 cut(s) 195
SgrBI CCGCGG 1 cut(s) 195
SmiMI CAYNNNNRTG 1 cut(s) 268
SmlI CTYRAG 2 cut(s) 199, 235
SmoI CTYRAG 2 cut(s) 199, 235
Sse9I AATT 1 cut(s) 216
SsiI CCGC 3 cut(s) 180, 192, 194
SspMI CTAG 1 cut(s) 84
StyI CCWWGG 1 cut(s) 93
TaiI ACGT 1 cut(s) 63
TasI AATT 1 cut(s) 216
TauI GCSGC 2 cut(s) 182, 194
TfiI GAWTC 1 cut(s) 211
Tru1I TTAA 1 cut(s) 150
Tru9I TTAA 1 cut(s) 150
TscAI CASTG 1 cut(s) 55
TseFI GTSAC 1 cut(s) 250
Tsp45I GTSAC 1 cut(s) 250
TspDTI ATGAA 1 cut(s) 176
TspRI CASTG 1 cut(s) 55
VspI ATTAAT 1 cut(s) 150
XbaI TCTAGA 1 cut(s) 83
XmnI GAANNNNTTC 1 cut(s) 119
XspI CTAG 1 cut(s) 84
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.