Rmu_sc0013450.1_g000001
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013450.1
N/A
Physical Location & Seq
Forward (+)
3090 .. 3463
374 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013450.1_g000001.1.cds

Sequence Viewer

Length: 291 bp
atggcatctgaaatgacaccaccggcagaactcaaacttccgggattccgattccatcccacagaggaagagcttctcgagttctacctcaagagcgtggtgttcggaaagcgattgcgcttcgatataatcgagtttctgaacatctaccgtcatgatccttgggacttgcctgtgattaatatatgggtgttgtttggttggtgttataggattttcaaagattggagaaagggagtggtacttttttgtgcccagggacaggaagcatgggagtggaggaaggcctaa

Protein Analysis

96

Amino Acids

11.67

Weight (kDa)

6.72

Isoelectric Point (pI)

48.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 152
AfaI GTAC 1 cut(s) 243
AfiI CCNNNNNNNGG 1 cut(s) 262
AgsI TTSAA 1 cut(s) 220
AjnI CCWGG 1 cut(s) 255
AluBI AGCT 1 cut(s) 73
AluI AGCT 1 cut(s) 73
AlwI GGATC 1 cut(s) 152
Ama87I CYCGRG 1 cut(s) 77
AoxI GGCC 1 cut(s) 285
AseI ATTAAT 1 cut(s) 180
Asp700I GAANNNNTTC 1 cut(s) 72
AspLEI GCGC 1 cut(s) 120
AsuC2I CCSGG 1 cut(s) 42
AvaI CYCGRG 1 cut(s) 77
BaeGI GKGCMC 1 cut(s) 256
BccI CCATC 1 cut(s) 63
BciT130I CCWGG 1 cut(s) 257
BcnI CCSGG 1 cut(s) 42
Bme1390I CCNGG 2 cut(s) 42, 257
BmeT110I CYCGRG 1 cut(s) 77
BmrFI CCNGG 2 cut(s) 42, 257
BmsI GCATC 1 cut(s) 14
BpuEI CTTGAG 1 cut(s) 74
BpuMI CCSGG 1 cut(s) 42
BsaJI CCNNGG 3 cut(s) 161, 255, 256
Bsc4I CCNNNNNNNGG 1 cut(s) 262
Bse118I RCCGGY 1 cut(s) 22
BseBI CCWGG 1 cut(s) 257
BseDI CCNNGG 3 cut(s) 161, 255, 256
BseGI GGATG 1 cut(s) 55
BseLI CCNNNNNNNGG 1 cut(s) 262
BseSI GKGCMC 1 cut(s) 256
BshFI GGCC 1 cut(s) 287
BsiHKCI CYCGRG 1 cut(s) 77
BsiSI CCGG 2 cut(s) 23, 41
BslFI GGGAC 2 cut(s) 179, 273
BslI CCNNNNNNNGG 1 cut(s) 262
BsmFI GGGAC 2 cut(s) 179, 273
BsnI GGCC 1 cut(s) 287
BsoBI CYCGRG 1 cut(s) 77
Bsp1286I GDGCHC 1 cut(s) 256
Bsp143I GATC 1 cut(s) 157
BspANI GGCC 1 cut(s) 287
BspHI TCATGA 1 cut(s) 154
BspPI GGATC 1 cut(s) 152
BspQI GCTCTTC 1 cut(s) 63
BsrFI RCCGGY 1 cut(s) 22
BssAI RCCGGY 1 cut(s) 22
BssECI CCNNGG 3 cut(s) 161, 255, 256
BssMI GATC 1 cut(s) 157
BssT1I CCWWGG 1 cut(s) 161
Bst2UI CCWGG 1 cut(s) 257
Bst4CI ACNGT 1 cut(s) 152
Bst6I CTCTTC 1 cut(s) 63
BstF5I GGATG 1 cut(s) 55
BstHHI GCGC 1 cut(s) 120
BstKTI GATC 1 cut(s) 160
BstMBI GATC 1 cut(s) 157
BstNI CCWGG 1 cut(s) 257
BstSCI CCNGG 2 cut(s) 40, 255
BstSLI GKGCMC 1 cut(s) 256
BsuRI GGCC 1 cut(s) 287
BtsCI GGATG 1 cut(s) 55
CciI TCATGA 1 cut(s) 154
CfoI GCGC 1 cut(s) 120
Cfr10I RCCGGY 1 cut(s) 22
Csp6I GTAC 1 cut(s) 242
CviAII CATG 2 cut(s) 155, 270
CviJI RGCY 2 cut(s) 73, 287
CviKI_1 RGCY 2 cut(s) 73, 287
CviQI GTAC 1 cut(s) 242
DpnI GATC 1 cut(s) 159
DpnII GATC 1 cut(s) 157
Eam1104I CTCTTC 1 cut(s) 63
EarI CTCTTC 1 cut(s) 63
Eco130I CCWWGG 1 cut(s) 161
Eco147I AGGCCT 1 cut(s) 287
Eco88I CYCGRG 1 cut(s) 77
EcoRII CCWGG 1 cut(s) 255
EcoT14I CCWWGG 1 cut(s) 161
ErhI CCWWGG 1 cut(s) 161
FaeI CATG 2 cut(s) 158, 273
FaiI YATR 6 cut(s) 128, 156, 185, 187, 210, 271
FaqI GGGAC 2 cut(s) 179, 273
FatI CATG 2 cut(s) 154, 269
FokI GGATG 1 cut(s) 42
GlaI GCGC 1 cut(s) 119
HaeIII GGCC 1 cut(s) 287
HapII CCGG 2 cut(s) 23, 41
HhaI GCGC 1 cut(s) 120
Hin1II CATG 2 cut(s) 158, 273
Hin6I GCGC 1 cut(s) 118
HinP1I GCGC 1 cut(s) 118
HinfI GANTC 2 cut(s) 45, 51
HpaII CCGG 2 cut(s) 23, 41
Hpy188I TCNGA 4 cut(s) 10, 50, 107, 141
Hpy188III TCNNGA 3 cut(s) 77, 91, 155
HpyAV CCTTC 1 cut(s) 277
HpyCH4III ACNGT 1 cut(s) 152
Hsp92II CATG 2 cut(s) 158, 273
HspAI GCGC 1 cut(s) 118
Kzo9I GATC 1 cut(s) 157
LguI GCTCTTC 1 cut(s) 63
LpnPI CCDG 6 cut(s) 36, 54, 186, 242, 248, 269
LweI GCATC 1 cut(s) 14
MalI GATC 1 cut(s) 159
MboI GATC 1 cut(s) 157
MboII GAAGA 1 cut(s) 80
MhlI GDGCHC 1 cut(s) 256
MnlI CCTC 3 cut(s) 58, 98, 273
MroXI GAANNNNTTC 1 cut(s) 72
MseI TTAA 1 cut(s) 180
MslI CAYNNNNRTG 1 cut(s) 274
MspI CCGG 2 cut(s) 23, 41
MspR9I CCNGG 2 cut(s) 42, 257
MvaI CCWGG 1 cut(s) 257
NciI CCSGG 1 cut(s) 42
NdeII GATC 1 cut(s) 157
NlaIII CATG 2 cut(s) 158, 273
PaeR7I CTCGAG 1 cut(s) 77
PagI TCATGA 1 cut(s) 154
PasI CCCWGGG 1 cut(s) 256
PceI AGGCCT 1 cut(s) 287
PciSI GCTCTTC 1 cut(s) 63
PcsI WCGNNNNNNNCGW 1 cut(s) 129
PdmI GAANNNNTTC 1 cut(s) 72
PfeI GAWTC 2 cut(s) 45, 51
PfoI TCCNGGA 1 cut(s) 40
PshBI ATTAAT 1 cut(s) 180
Psp6I CCWGG 1 cut(s) 255
PspGI CCWGG 1 cut(s) 255
RsaI GTAC 1 cut(s) 243
RsaNI GTAC 1 cut(s) 242
RseI CAYNNNNRTG 1 cut(s) 274
SapI GCTCTTC 1 cut(s) 63
SaqAI TTAA 1 cut(s) 180
Sau3AI GATC 1 cut(s) 157
ScrFI CCNGG 2 cut(s) 42, 257
SduI GDGCHC 1 cut(s) 256
SetI ASST 2 cut(s) 75, 90
SfaNI GCATC 1 cut(s) 14
Sfr274I CTCGAG 1 cut(s) 77
SlaI CTCGAG 1 cut(s) 77
SmiMI CAYNNNNRTG 1 cut(s) 274
SmlI CTYRAG 2 cut(s) 77, 89
SmoI CTYRAG 2 cut(s) 77, 89
SseBI AGGCCT 1 cut(s) 287
StuI AGGCCT 1 cut(s) 287
StyD4I CCNGG 2 cut(s) 40, 255
StyI CCWWGG 1 cut(s) 161
TaaI ACNGT 1 cut(s) 152
TaqI TCGA 3 cut(s) 78, 123, 132
TfiI GAWTC 2 cut(s) 45, 51
Tru1I TTAA 1 cut(s) 180
Tru9I TTAA 1 cut(s) 180
VspI ATTAAT 1 cut(s) 180
XhoI CTCGAG 1 cut(s) 77
XmnI GAANNNNTTC 1 cut(s) 72
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.