Rmu_sc0026976.1_g000001
HSP70 Family

Belongs to the heat shock protein 70 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0026976.1
N/A
Physical Location & Seq
Forward (+)
1 .. 1758
1758 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0026976.1_g000001.1.cds

Sequence Viewer

Length: 911 bp
ctcccgataaggtttgtgcgaaaagacttcagttgctcttgataaattccctcattgatcttgacatagatcttgtccccaagcacaactggggctgtcagttgattgaggttgatagaagactcgacggagtccgaaacgatggaggcaaacgttctaacttcgagaggaggcttaggagcagaggcctctctgacgctttgggacaaaccccatgggcaagcgtttgccctgggaccgccgaaaggattctgcatgacaggcttacagtggcaccatcacacggcggtgaaacggaggagaatagcgttgccactgcaaaccctagaagctttcagtcgcgacgtggggaagagttctgcgctccgcttttttctcaattgtctaatagatatctctctcaaccagtatgtttgtttttactccttaatcattccattccattccaagtaagtaaacgtgcccttaatctcataatggcaggagtagaagagagtcatgcaattgggattgatctagggacaacctactcttgtgtggccgtatggcagcatgatcgtgtagaaattatagtgaatgatcagggaaaccggaccactccatctcatgttgctttcacttatactgagcgcttgatcggtcaagcggcacttaaccagttcaccagtaacccgaccagcaactccatctttggtatgttctttcctcaatcgcttctagacctgtgggtgtgtagattccaaaggtggtggtaccatggcaaccacctcaggctggttggcttaaagccaatgtggatgctgcattctcaaatgggattgggagttgggatagtcttgatttggttcttggtggtgcttgtggacagtgtgctcatgcgcaatctgcagtgggagcagcatgtactttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 ko04010 ko04141 ko04144 ko04213 ko04612 ko04915 ko05134 ko05145 ko05162 ko05164 ko05169 map03040 map04010 map04141 map04144 map04213 map04612 map04915 map05134 map05145 map05162 map05164 map05169
Pfam Domains
Protein Families
HSP70

Protein Analysis

302

Amino Acids

34.25

Weight (kDa)

8.36

Isoelectric Point (pI)

44.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 880
Acc65I GGTACC 1 cut(s) 752
AccB1I GGYRCC 2 cut(s) 273, 752
AccII CGCG 1 cut(s) 342
AciI CCGC 4 cut(s) 239, 287, 367, 646
AclI AACGTT 1 cut(s) 153
AcoI YGGCCR 1 cut(s) 539
AcsI RAATTY 1 cut(s) 45
AcuI CTGAAG 1 cut(s) 13
AfaI GTAC 2 cut(s) 754, 905
AfeI AGCGCT 1 cut(s) 631
AfiI CCNNNNNNNGG 3 cut(s) 245, 283, 774
AjiI CACGTC 1 cut(s) 346
AjnI CCWGG 1 cut(s) 231
AleI CACNNNNGTG 1 cut(s) 287
AluBI AGCT 1 cut(s) 332
AluI AGCT 1 cut(s) 332
Alw21I GWGCWC 1 cut(s) 875
Aor51HI AGCGCT 1 cut(s) 631
AoxI GGCC 2 cut(s) 186, 539
ApeKI GCWGC 3 cut(s) 549, 801, 897
ApoI RAATTY 1 cut(s) 45
Asp700I GAANNNNTTC 1 cut(s) 248
Asp718I GGTACC 1 cut(s) 752
AspLEI GCGC 3 cut(s) 364, 632, 881
AspS9I GGNCC 2 cut(s) 236, 593
AsuHPI GGTGA 2 cut(s) 301, 654
AvaII GGWCC 2 cut(s) 236, 593
AxyI CCTNAGG 1 cut(s) 769
BaeGI GKGCMC 1 cut(s) 465
BanI GGYRCC 2 cut(s) 273, 752
BbsI GAAGAC 1 cut(s) 126
Bbv12I GWGCWC 1 cut(s) 875
BbvI GCAGC 2 cut(s) 561, 788
BccI CCATC 4 cut(s) 136, 285, 609, 694
BceAI ACGGC 2 cut(s) 300, 526
BcgI CGANNNNNNTGC 2 cut(s) 538, 572
BciT130I CCWGG 1 cut(s) 233
BclI TGATCA 1 cut(s) 579
BfaI CTAG 3 cut(s) 326, 517, 718
BfmI CTRYAG 1 cut(s) 886
BfoI RGCGCY 1 cut(s) 633
BglII AGATCT 1 cut(s) 69
BisI GCNGC 4 cut(s) 550, 647, 802, 898
BlsI GCNGC 4 cut(s) 551, 648, 803, 899
Bme1390I CCNGG 1 cut(s) 233
Bme18I GGWCC 2 cut(s) 236, 593
BmgBI CACGTC 1 cut(s) 346
BmgT120I GGNCC 2 cut(s) 236, 593
BmiI GGNNCC 3 cut(s) 237, 275, 754
BmrFI CCNGG 1 cut(s) 233
BmrI ACTGGG 1 cut(s) 99
BmsI GCATC 1 cut(s) 788
BmuI ACTGGG 1 cut(s) 99
BpiI GAAGAC 1 cut(s) 126
Bpu10I CCTNAGC 1 cut(s) 175
BsaJI CCNNGG 4 cut(s) 214, 231, 232, 756
BsaWI WCCGGW 1 cut(s) 590
Bsc4I CCNNNNNNNGG 3 cut(s) 245, 283, 774
Bse1I ACTGG 4 cut(s) 94, 406, 657, 665
Bse21I CCTNAGG 1 cut(s) 769
BseBI CCWGG 1 cut(s) 233
BseDI CCNNGG 4 cut(s) 214, 231, 232, 756
BseGI GGATG 1 cut(s) 803
BseLI CCNNNNNNNGG 3 cut(s) 245, 283, 774
BseMII CTCAG 2 cut(s) 617, 783
BseNI ACTGG 4 cut(s) 94, 406, 657, 665
BseRI GAGGAG 2 cut(s) 183, 313
BseSI GKGCMC 1 cut(s) 465
BseXI GCAGC 2 cut(s) 561, 788
Bsh1236I CGCG 1 cut(s) 342
BshFI GGCC 2 cut(s) 188, 541
BshNI GGYRCC 2 cut(s) 273, 752
BsiHKAI GWGCWC 1 cut(s) 875
BsiSI CCGG 1 cut(s) 591
BslFI GGGAC 4 cut(s) 61, 218, 249, 534
BslI CCNNNNNNNGG 3 cut(s) 245, 283, 774
BsmFI GGGAC 4 cut(s) 61, 218, 249, 534
BsmI GAATGC 1 cut(s) 804
BsnI GGCC 2 cut(s) 188, 541
Bsp1286I GDGCHC 2 cut(s) 465, 875
Bsp143I GATC 6 cut(s) 57, 69, 513, 555, 579, 635
Bsp19I CCATGG 2 cut(s) 214, 756
Bsp68I TCGCGA 1 cut(s) 342
BspACI CCGC 4 cut(s) 239, 287, 367, 646
BspANI GGCC 2 cut(s) 188, 541
BspCNI CTCAG 2 cut(s) 618, 782
BspFNI CGCG 1 cut(s) 342
BspLI GGNNCC 3 cut(s) 237, 275, 754
BspMAI CTGCAG 1 cut(s) 890
BspT107I GGYRCC 2 cut(s) 273, 752
BsrI ACTGG 4 cut(s) 94, 406, 657, 665
BssECI CCNNGG 4 cut(s) 214, 231, 232, 756
BssMI GATC 6 cut(s) 57, 69, 513, 555, 579, 635
BssT1I CCWWGG 2 cut(s) 214, 756
Bst2UI CCWGG 1 cut(s) 233
Bst4CI ACNGT 2 cut(s) 270, 868
Bst6I CTCTTC 2 cut(s) 347, 485
BstC8I GCNNGC 1 cut(s) 222
BstDEI CTNAG 3 cut(s) 175, 626, 769
BstDSI CCRYGG 2 cut(s) 214, 756
BstF5I GGATG 1 cut(s) 803
BstFNI CGCG 1 cut(s) 342
BstH2I RGCGCY 1 cut(s) 633
BstHHI GCGC 3 cut(s) 364, 632, 881
BstKTI GATC 6 cut(s) 60, 72, 516, 558, 582, 638
BstMBI GATC 6 cut(s) 57, 69, 513, 555, 579, 635
BstMWI GCNNNNNNNGC 3 cut(s) 261, 885, 894
BstNI CCWGG 1 cut(s) 233
BstNSI RCATGY 1 cut(s) 904
BstSCI CCNGG 1 cut(s) 231
BstSFI CTRYAG 1 cut(s) 886
BstSLI GKGCMC 1 cut(s) 465
BstUI CGCG 1 cut(s) 342
BstV1I GCAGC 2 cut(s) 561, 788
BstV2I GAAGAC 1 cut(s) 126
BstX2I RGATCY 1 cut(s) 69
BstYI RGATCY 1 cut(s) 69
Bsu36I CCTNAGG 1 cut(s) 769
BsuRI GGCC 2 cut(s) 188, 541
BtgI CCRYGG 2 cut(s) 214, 756
BtrI CACGTC 1 cut(s) 346
BtsCI GGATG 1 cut(s) 803
BtsI GCAGTG 2 cut(s) 314, 895
BtsIMutI CAGTG 4 cut(s) 275, 314, 873, 895
BtuMI TCGCGA 1 cut(s) 342
Cac8I GCNNGC 1 cut(s) 222
CfoI GCGC 3 cut(s) 364, 632, 881
Cfr13I GGNCC 2 cut(s) 236, 593
CseI GACGC 1 cut(s) 205
Csp6I GTAC 2 cut(s) 753, 904
CspCI CAANNNNNGTGG 2 cut(s) 730, 765
CviAII CATG 8 cut(s) 215, 256, 499, 553, 607, 757, 876, 901
CviJI RGCY 9 cut(s) 95, 174, 188, 264, 332, 541, 774, 782, 789
CviKI_1 RGCY 9 cut(s) 95, 174, 188, 264, 332, 541, 774, 782, 789
CviQI GTAC 2 cut(s) 753, 904
DdeI CTNAG 3 cut(s) 175, 626, 769
DpnI GATC 6 cut(s) 59, 71, 515, 557, 581, 637
DpnII GATC 6 cut(s) 57, 69, 513, 555, 579, 635
EaeI YGGCCR 1 cut(s) 539
Eam1104I CTCTTC 2 cut(s) 347, 485
EarI CTCTTC 2 cut(s) 347, 485
Eco130I CCWWGG 2 cut(s) 214, 756
Eco147I AGGCCT 1 cut(s) 188
Eco32I GATATC 1 cut(s) 394
Eco47I GGWCC 2 cut(s) 236, 593
Eco47III AGCGCT 1 cut(s) 631
Eco57I CTGAAG 1 cut(s) 13
Eco81I CCTNAGG 1 cut(s) 769
EcoRII CCWGG 1 cut(s) 231
EcoRV GATATC 1 cut(s) 394
EcoT14I CCWWGG 2 cut(s) 214, 756
ErhI CCWWGG 2 cut(s) 214, 756
FaeI CATG 8 cut(s) 218, 259, 502, 556, 610, 760, 879, 904
FalI AAGNNNNNCTT 2 cut(s) 635, 667
FaqI GGGAC 4 cut(s) 61, 218, 249, 534
FatI CATG 8 cut(s) 214, 255, 498, 552, 606, 756, 875, 900
FbaI TGATCA 1 cut(s) 579
Fnu4HI GCNGC 4 cut(s) 550, 647, 802, 898
FokI GGATG 1 cut(s) 810
Fsp4HI GCNGC 4 cut(s) 550, 647, 802, 898
FspBI CTAG 3 cut(s) 326, 517, 718
FspI TGCGCA 1 cut(s) 880
GlaI GCGC 3 cut(s) 363, 631, 880
GluI GCNGC 4 cut(s) 550, 647, 802, 898
HaeII RGCGCY 1 cut(s) 633
HaeIII GGCC 2 cut(s) 188, 541
HapII CCGG 1 cut(s) 591
HgaI GACGC 1 cut(s) 205
HhaI GCGC 3 cut(s) 364, 632, 881
Hin1II CATG 8 cut(s) 218, 259, 502, 556, 610, 760, 879, 904
Hin6I GCGC 3 cut(s) 362, 630, 879
HinP1I GCGC 3 cut(s) 362, 630, 879
HindIII AAGCTT 1 cut(s) 330
HinfI GANTC 5 cut(s) 122, 131, 249, 495, 737
HpaII CCGG 1 cut(s) 591
HphI GGTGA 2 cut(s) 301, 654
Hpy166II GTNNAC 3 cut(s) 457, 662, 864
Hpy188I TCNGA 2 cut(s) 136, 195
Hpy188III TCNNGA 7 cut(s) 4, 39, 61, 165, 341, 718, 837
Hpy8I GTNNAC 3 cut(s) 457, 662, 864
Hpy99I CGWCG 2 cut(s) 130, 347
HpyCH4III ACNGT 2 cut(s) 270, 868
HpyCH4IV ACGT 3 cut(s) 153, 345, 459
HpyCH4V TGCA 5 cut(s) 255, 319, 502, 804, 888
HpyF10VI GCNNNNNNNGC 3 cut(s) 261, 885, 894
HpyF3I CTNAG 3 cut(s) 175, 626, 769
HpySE526I ACGT 3 cut(s) 153, 345, 459
Hsp92II CATG 8 cut(s) 218, 259, 502, 556, 610, 760, 879, 904
HspAI GCGC 3 cut(s) 362, 630, 879
KpnI GGTACC 1 cut(s) 756
Ksp22I TGATCA 1 cut(s) 579
Kzo9I GATC 6 cut(s) 57, 69, 513, 555, 579, 635
LmnI GCTCC 3 cut(s) 179, 369, 894
Lsp1109I GCAGC 2 cut(s) 561, 788
LweI GCATC 1 cut(s) 788
MaeI CTAG 3 cut(s) 326, 517, 718
MaeII ACGT 3 cut(s) 153, 345, 459
MaeIII GTNAC 1 cut(s) 667
MalI GATC 6 cut(s) 59, 71, 515, 557, 581, 637
MboI GATC 6 cut(s) 57, 69, 513, 555, 579, 635
MboII GAAGA 3 cut(s) 131, 364, 502
MfeI CAATTG 2 cut(s) 379, 503
MflI RGATCY 1 cut(s) 69
MhlI GDGCHC 2 cut(s) 465, 875
MluCI AATT 4 cut(s) 45, 379, 503, 566
MlyI GAGTC 3 cut(s) 116, 140, 504
MroXI GAANNNNTTC 1 cut(s) 248
MseI TTAA 4 cut(s) 428, 467, 653, 784
MslI CAYNNNNRTG 2 cut(s) 287, 557
MspI CCGG 1 cut(s) 591
MspR9I CCNGG 1 cut(s) 233
MunI CAATTG 2 cut(s) 379, 503
Mva1269I GAATGC 1 cut(s) 804
MvaI CCWGG 1 cut(s) 233
MvnI CGCG 1 cut(s) 342
MwoI GCNNNNNNNGC 3 cut(s) 261, 885, 894
NcoI CCATGG 2 cut(s) 214, 756
NdeII GATC 6 cut(s) 57, 69, 513, 555, 579, 635
NlaIII CATG 8 cut(s) 218, 259, 502, 556, 610, 760, 879, 904
NlaIV GGNNCC 3 cut(s) 237, 275, 754
NruI TCGCGA 1 cut(s) 342
NsbI TGCGCA 1 cut(s) 880
NspI RCATGY 1 cut(s) 904
OliI CACNNNNGTG 1 cut(s) 287
PasI CCCWGGG 1 cut(s) 232
PceI AGGCCT 1 cut(s) 188
PctI GAATGC 1 cut(s) 804
PdmI GAANNNNTTC 1 cut(s) 248
PfeI GAWTC 2 cut(s) 249, 737
PflFI GACNNNGTC 1 cut(s) 130
PkrI GCNGC 4 cut(s) 551, 648, 803, 899
PleI GAGTC 3 cut(s) 116, 139, 503
PpsI GAGTC 3 cut(s) 116, 139, 503
Psp1406I AACGTT 1 cut(s) 153
Psp6I CCWGG 1 cut(s) 231
PspGI CCWGG 1 cut(s) 231
PspN4I GGNNCC 3 cut(s) 237, 275, 754
PspPI GGNCC 2 cut(s) 236, 593
PstI CTGCAG 1 cut(s) 890
PsuI RGATCY 1 cut(s) 69
PsyI GACNNNGTC 1 cut(s) 130
RruI TCGCGA 1 cut(s) 342
RsaI GTAC 2 cut(s) 754, 905
RsaNI GTAC 2 cut(s) 753, 904
RseI CAYNNNNRTG 2 cut(s) 287, 557
SaqAI TTAA 4 cut(s) 428, 467, 653, 784
SatI GCNGC 4 cut(s) 550, 647, 802, 898
Sau3AI GATC 6 cut(s) 57, 69, 513, 555, 579, 635
Sau96I GGNCC 2 cut(s) 236, 593
SchI GAGTC 3 cut(s) 116, 140, 504
ScrFI CCNGG 1 cut(s) 233
SduI GDGCHC 2 cut(s) 465, 875
SfaNI GCATC 1 cut(s) 788
SfcI CTRYAG 1 cut(s) 886
SinI GGWCC 2 cut(s) 236, 593
SmiMI CAYNNNNRTG 2 cut(s) 287, 557
Sse9I AATT 4 cut(s) 45, 379, 503, 566
SseBI AGGCCT 1 cut(s) 188
SsiI CCGC 4 cut(s) 239, 287, 367, 646
SspMI CTAG 3 cut(s) 326, 517, 718
StuI AGGCCT 1 cut(s) 188
StyD4I CCNGG 1 cut(s) 231
StyI CCWWGG 2 cut(s) 214, 756
TaaI ACNGT 2 cut(s) 270, 868
TaiI ACGT 3 cut(s) 156, 348, 462
TaqI TCGA 2 cut(s) 125, 164
TaqII GACCGA 1 cut(s) 628
TasI AATT 4 cut(s) 45, 379, 503, 566
TatI WGTACW 1 cut(s) 903
TauI GCSGC 1 cut(s) 649
TfiI GAWTC 2 cut(s) 249, 737
Tru1I TTAA 4 cut(s) 428, 467, 653, 784
Tru9I TTAA 4 cut(s) 428, 467, 653, 784
TscAI CASTG 4 cut(s) 275, 321, 873, 895
TseI GCWGC 3 cut(s) 549, 801, 897
TspGWI ACGGA 2 cut(s) 143, 310
TspRI CASTG 4 cut(s) 275, 321, 873, 895
Tth111I GACNNNGTC 1 cut(s) 130
VpaK11BI GGWCC 2 cut(s) 236, 593
XapI RAATTY 1 cut(s) 45
XbaI TCTAGA 1 cut(s) 717
XceI RCATGY 1 cut(s) 904
XmnI GAANNNNTTC 1 cut(s) 248
XspI CTAG 3 cut(s) 326, 517, 718
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.