Rmu_sc0027761.1_g000001

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0027761.1
N/A
Physical Location & Seq
Reverse (-)
2 .. 279
278 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0027761.1_g000001.1.cds

Sequence Viewer

Length: 278 bp
atggcgattagatttacggaggcaattctttttaaaactaaggagacaattgaactcgtaggacgccaagtgggatatgtaattcactgcaaaagcaaccttcaaagactgcaggctcaattggaagaattgaacgccgcccgggaggctgtggaggataaagttgtggaagctgaagacaaaggtgaagcagttcagccagatgtccagttgtggctacaggaagtgggcaacatcaatgcagtggcagaggaattgttgaaagatgaaaaccaagc
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

93

Amino Acids

10.48

Weight (kDa)

4.57

Isoelectric Point (pI)

43.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 138
AcuI CTGAAG 1 cut(s) 195
AcyI GRCGYC 1 cut(s) 64
AgsI TTSAA 4 cut(s) 53, 104, 133, 262
AluBI AGCT 1 cut(s) 173
AluI AGCT 1 cut(s) 173
Alw26I GTCTC 1 cut(s) 38
Ama87I CYCGRG 1 cut(s) 141
Asp700I GAANNNNTTC 1 cut(s) 192
AsuC2I CCSGG 2 cut(s) 142, 143
AsuHPI GGTGA 1 cut(s) 197
AvaI CYCGRG 1 cut(s) 141
BbsI GAAGAC 1 cut(s) 183
BcnI CCSGG 2 cut(s) 142, 143
BcoDI GTCTC 1 cut(s) 38
BfmI CTRYAG 2 cut(s) 110, 218
BglI GCCNNNNNGGC 1 cut(s) 146
BisI GCNGC 1 cut(s) 138
BlsI GCNGC 1 cut(s) 139
Bme1390I CCNGG 2 cut(s) 142, 143
BmeT110I CYCGRG 1 cut(s) 141
BmrFI CCNGG 2 cut(s) 142, 143
BpiI GAAGAC 1 cut(s) 183
BpuMI CCSGG 2 cut(s) 142, 143
BsaHI GRCGYC 1 cut(s) 64
BsaJI CCNNGG 1 cut(s) 141
Bse1I ACTGG 1 cut(s) 208
BseDI CCNNGG 1 cut(s) 141
BseNI ACTGG 1 cut(s) 208
BsiHKCI CYCGRG 1 cut(s) 141
BsiSI CCGG 1 cut(s) 142
BsmAI GTCTC 1 cut(s) 38
BsoBI CYCGRG 1 cut(s) 141
BspACI CCGC 1 cut(s) 138
BspMAI CTGCAG 1 cut(s) 114
BsrI ACTGG 1 cut(s) 208
BssECI CCNNGG 1 cut(s) 141
BssNI GRCGYC 1 cut(s) 64
BstACI GRCGYC 1 cut(s) 64
BstC8I GCNNGC 1 cut(s) 114
BstDEI CTNAG 1 cut(s) 39
BstMAI GTCTC 1 cut(s) 38
BstMWI GCNNNNNNNGC 1 cut(s) 146
BstSCI CCNGG 2 cut(s) 140, 141
BstSFI CTRYAG 2 cut(s) 110, 218
BstV2I GAAGAC 1 cut(s) 183
BtsI GCAGTG 2 cut(s) 85, 249
BtsIMutI CAGTG 2 cut(s) 85, 249
Cac8I GCNNGC 1 cut(s) 114
Cfr9I CCCGGG 1 cut(s) 141
CseI GACGC 1 cut(s) 72
CviJI RGCY 5 cut(s) 116, 149, 173, 199, 217
CviKI_1 RGCY 5 cut(s) 116, 149, 173, 199, 217
DdeI CTNAG 1 cut(s) 39
DraI TTTAAA 1 cut(s) 34
Eco57I CTGAAG 1 cut(s) 195
Eco88I CYCGRG 1 cut(s) 141
FaiI YATR 1 cut(s) 78
Fnu4HI GCNGC 1 cut(s) 138
Fsp4HI GCNGC 1 cut(s) 138
GluI GCNGC 1 cut(s) 138
HapII CCGG 1 cut(s) 142
HgaI GACGC 1 cut(s) 72
Hin1I GRCGYC 1 cut(s) 64
HpaII CCGG 1 cut(s) 142
HphI GGTGA 1 cut(s) 197
HpyAV CCTTC 1 cut(s) 110
HpyCH4V TGCA 3 cut(s) 90, 112, 242
HpyF10VI GCNNNNNNNGC 1 cut(s) 146
HpyF3I CTNAG 1 cut(s) 39
Hsp92I GRCGYC 1 cut(s) 64
LpnPI CCDG 5 cut(s) 98, 155, 206, 213, 221
MboII GAAGA 2 cut(s) 137, 188
MfeI CAATTG 2 cut(s) 48, 119
MluCI AATT 6 cut(s) 24, 48, 81, 119, 128, 254
MnlI CCTC 4 cut(s) 13, 139, 148, 244
MroXI GAANNNNTTC 1 cut(s) 192
MseI TTAA 1 cut(s) 33
MspI CCGG 1 cut(s) 142
MspR9I CCNGG 2 cut(s) 142, 143
MunI CAATTG 2 cut(s) 48, 119
MwoI GCNNNNNNNGC 1 cut(s) 146
NciI CCSGG 2 cut(s) 142, 143
PdmI GAANNNNTTC 1 cut(s) 192
PkrI GCNGC 1 cut(s) 139
PstI CTGCAG 1 cut(s) 114
SaqAI TTAA 1 cut(s) 33
SatI GCNGC 1 cut(s) 138
ScrFI CCNGG 2 cut(s) 142, 143
SetI ASST 3 cut(s) 102, 175, 187
SfcI CTRYAG 2 cut(s) 110, 218
SgeI CNNG 9 cut(s) 68, 80, 125, 153, 154, 155, 212, 220, 233
SmaI CCCGGG 1 cut(s) 143
Sse9I AATT 6 cut(s) 24, 48, 81, 119, 128, 254
SsiI CCGC 1 cut(s) 138
StyD4I CCNGG 2 cut(s) 140, 141
TasI AATT 6 cut(s) 24, 48, 81, 119, 128, 254
TauI GCSGC 1 cut(s) 140
Tru1I TTAA 1 cut(s) 33
Tru9I TTAA 1 cut(s) 33
TscAI CASTG 2 cut(s) 92, 249
TspGWI ACGGA 1 cut(s) 32
TspMI CCCGGG 1 cut(s) 141
TspRI CASTG 2 cut(s) 92, 249
XmaI CCCGGG 1 cut(s) 141
XmnI GAANNNNTTC 1 cut(s) 192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.