Rmu_sc0032754.1_g000001
NAC Family

Nascent polypeptide-associated complex subunit alpha-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0032754.1
N/A
Physical Location & Seq
Forward (+)
1 .. 1361
1361 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0032754.1_g000001.1.cds

Sequence Viewer

Length: 336 bp
acttccgaccaaccccgaaagatgtcgccggcgctcgtcgaggaggagctcgtcggagaggtcccgtccaccgagcaatccctcaagaacggccttcagaacaaggaagaagatgaggtcgtggtggaggatgtgaaggacgacaaggaggacgacgatgacgacgatgatgacgaggacgaggacgatgacgatgacaaggaagatggcgctcagggtggaaatgagtcttcaaagcaaagcaggagtgagaagaagagtcgtaaggcaatgttgaagctgggaatgaagcaagtcactggtgttagcagggtcaccatcaagagaaccaaaaac
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAC

Protein Analysis

112

Amino Acids

12.51

Weight (kDa)

4.31

Isoelectric Point (pI)

72.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 80
AgsI TTSAA 2 cut(s) 234, 277
AluBI AGCT 2 cut(s) 49, 280
AluI AGCT 2 cut(s) 49, 280
Alw21I GWGCWC 1 cut(s) 51
AoxI GGCC 1 cut(s) 91
AspLEI GCGC 2 cut(s) 34, 212
AspS9I GGNCC 1 cut(s) 61
AsuHPI GGTGA 1 cut(s) 307
AvaII GGWCC 1 cut(s) 61
BanII GRGCYC 1 cut(s) 51
BbsI GAAGAC 1 cut(s) 222
Bbv12I GWGCWC 1 cut(s) 51
BccI CCATC 2 cut(s) 200, 326
BceAI ACGGC 1 cut(s) 106
BfoI RGCGCY 2 cut(s) 35, 213
Bme18I GGWCC 1 cut(s) 61
BmgT120I GGNCC 1 cut(s) 61
BmiI GGNNCC 1 cut(s) 63
BpiI GAAGAC 1 cut(s) 222
Bpu10I CCTNAGC 1 cut(s) 213
BpuEI CTTGAG 1 cut(s) 68
Bse118I RCCGGY 1 cut(s) 28
Bse1I ACTGG 1 cut(s) 304
Bse3DI GCAATG 1 cut(s) 276
BseGI GGATG 1 cut(s) 136
BseMI GCAATG 1 cut(s) 276
BseMII CTCAG 1 cut(s) 227
BseNI ACTGG 1 cut(s) 304
BseRI GAGGAG 2 cut(s) 56, 59
BseYI CCCAGC 1 cut(s) 280
BshFI GGCC 1 cut(s) 93
BsiHKAI GWGCWC 1 cut(s) 51
BsiSI CCGG 1 cut(s) 29
BslFI GGGAC 1 cut(s) 47
BsmFI GGGAC 1 cut(s) 47
BsnI GGCC 1 cut(s) 93
Bsp1286I GDGCHC 1 cut(s) 51
BspANI GGCC 1 cut(s) 93
BspCNI CTCAG 1 cut(s) 226
BspLI GGNNCC 1 cut(s) 63
BsrDI GCAATG 1 cut(s) 276
BsrFI RCCGGY 1 cut(s) 28
BsrI ACTGG 1 cut(s) 304
BssAI RCCGGY 1 cut(s) 28
Bst6I CTCTTC 1 cut(s) 251
BstC8I GCNNGC 1 cut(s) 30
BstDEI CTNAG 1 cut(s) 213
BstEII GGTNACC 1 cut(s) 313
BstF5I GGATG 1 cut(s) 136
BstH2I RGCGCY 2 cut(s) 35, 213
BstHHI GCGC 2 cut(s) 34, 212
BstPI GGTNACC 1 cut(s) 313
BstV2I GAAGAC 1 cut(s) 222
BsuRI GGCC 1 cut(s) 93
BtsCI GGATG 1 cut(s) 136
BtsIMutI CAGTG 1 cut(s) 297
Cac8I GCNNGC 1 cut(s) 30
CfoI GCGC 2 cut(s) 34, 212
Cfr10I RCCGGY 1 cut(s) 28
Cfr13I GGNCC 1 cut(s) 61
CviJI RGCY 3 cut(s) 49, 93, 280
CviKI_1 RGCY 3 cut(s) 49, 93, 280
DdeI CTNAG 1 cut(s) 213
Eam1104I CTCTTC 1 cut(s) 251
EarI CTCTTC 1 cut(s) 251
Ecl136II GAGCTC 1 cut(s) 49
Eco24I GRGCYC 1 cut(s) 51
Eco47I GGWCC 1 cut(s) 61
Eco53kI GAGCTC 1 cut(s) 49
Eco57I CTGAAG 1 cut(s) 80
Eco91I GGTNACC 1 cut(s) 313
EcoICRI GAGCTC 1 cut(s) 49
EcoO109I RGGNCCY 1 cut(s) 61
EcoO65I GGTNACC 1 cut(s) 313
EcoT38I GRGCYC 1 cut(s) 51
FaqI GGGAC 1 cut(s) 47
FokI GGATG 1 cut(s) 143
FriOI GRGCYC 1 cut(s) 51
GlaI GCGC 2 cut(s) 33, 211
GsaI CCCAGC 1 cut(s) 284
HaeII RGCGCY 2 cut(s) 35, 213
HaeIII GGCC 1 cut(s) 93
HapII CCGG 1 cut(s) 29
HhaI GCGC 2 cut(s) 34, 212
Hin6I GCGC 2 cut(s) 32, 210
HinP1I GCGC 2 cut(s) 32, 210
HinfI GANTC 2 cut(s) 227, 259
HpaII CCGG 1 cut(s) 29
HphI GGTGA 1 cut(s) 307
Hpy166II GTNNAC 1 cut(s) 69
Hpy188I TCNGA 3 cut(s) 7, 56, 99
Hpy188III TCNNGA 2 cut(s) 85, 322
Hpy8I GTNNAC 1 cut(s) 69
Hpy99I CGWCG 4 cut(s) 41, 56, 158, 167
HpyAV CCTTC 2 cut(s) 104, 130
HpyF3I CTNAG 1 cut(s) 213
HspAI GCGC 2 cut(s) 32, 210
KroI GCCGGC 1 cut(s) 28
KroNI GCCGGC 1 cut(s) 30
LmnI GCTCC 1 cut(s) 46
LpnPI CCDG 6 cut(s) 42, 200, 229, 266, 285, 295
MaeIII GTNAC 2 cut(s) 295, 313
MboII GAAGA 6 cut(s) 119, 122, 215, 222, 265, 268
MhlI GDGCHC 1 cut(s) 51
MlyI GAGTC 2 cut(s) 236, 268
MmeI TCCRAC 2 cut(s) 30, 34
MnlI CCTC 9 cut(s) 34, 37, 52, 92, 109, 121, 142, 169, 175
MreI CGCCGGCG 1 cut(s) 28
MroNI GCCGGC 1 cut(s) 28
MspI CCGG 1 cut(s) 29
NaeI GCCGGC 1 cut(s) 30
NgoMIV GCCGGC 1 cut(s) 28
NlaIV GGNNCC 1 cut(s) 63
NmuCI GTSAC 2 cut(s) 295, 313
PcsI WCGNNNNNNNCGW 3 cut(s) 159, 162, 171
PdiI GCCGGC 1 cut(s) 30
PleI GAGTC 2 cut(s) 235, 267
PpsI GAGTC 2 cut(s) 235, 267
PpuMI RGGWCCY 1 cut(s) 61
Psp124BI GAGCTC 1 cut(s) 51
Psp5II RGGWCCY 1 cut(s) 61
PspEI GGTNACC 1 cut(s) 313
PspFI CCCAGC 1 cut(s) 280
PspN4I GGNNCC 1 cut(s) 63
PspPI GGNCC 1 cut(s) 61
PspPPI RGGWCCY 1 cut(s) 61
SacI GAGCTC 1 cut(s) 51
Sau96I GGNCC 1 cut(s) 61
SchI GAGTC 2 cut(s) 236, 268
SduI GDGCHC 1 cut(s) 51
SetI ASST 4 cut(s) 51, 63, 120, 282
SgrAI CRCCGGYG 1 cut(s) 28
SinI GGWCC 1 cut(s) 61
SmlI CTYRAG 1 cut(s) 83
SmoI CTYRAG 1 cut(s) 83
SstI GAGCTC 1 cut(s) 51
TaqI TCGA 1 cut(s) 39
TscAI CASTG 1 cut(s) 304
TseFI GTSAC 2 cut(s) 295, 313
Tsp45I GTSAC 2 cut(s) 295, 313
TspDTI ATGAA 1 cut(s) 302
TspRI CASTG 1 cut(s) 304
VpaK11BI GGWCC 1 cut(s) 61
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.