Rmu_sc0034694.1_g000001

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0034694.1
N/A
Physical Location & Seq
Reverse (-)
1 .. 258
258 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0034694.1_g000001.1.cds

Sequence Viewer

Length: 163 bp
atgcatcaccttgttggtgatctggctcggtgggctgcgggagaaatttgtctcaggttggaggataaagatggtagatgttctcgaaagacacgtcattcgtcatacattcccggtcagtatgatggggttaacaaatttgaggcattctctgaagccagac
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

54

Amino Acids

6.18

Weight (kDa)

7.85

Isoelectric Point (pI)

59.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 38
AcsI RAATTY 2 cut(s) 45, 137
AflIII ACRYGT 1 cut(s) 92
AjiI CACGTC 1 cut(s) 95
Alw26I GTCTC 1 cut(s) 56
ApeKI GCWGC 1 cut(s) 35
ApoI RAATTY 2 cut(s) 45, 137
ArsI GACNNNNNNTTYG 4 cut(s) 79, 82, 111, 114
AsuC2I CCSGG 1 cut(s) 114
AsuHPI GGTGA 1 cut(s) 29
BbvI GCAGC 1 cut(s) 22
BccI CCATC 2 cut(s) 65, 119
BcnI CCSGG 1 cut(s) 114
BcoDI GTCTC 1 cut(s) 56
BisI GCNGC 1 cut(s) 36
BlsI GCNGC 1 cut(s) 37
Bme1390I CCNGG 1 cut(s) 114
BmgBI CACGTC 1 cut(s) 95
BmrFI CCNGG 1 cut(s) 114
BmsI GCATC 1 cut(s) 13
BplI GAGNNNNNCTC 1 cut(s) 134
BpuMI CCSGG 1 cut(s) 114
BseMII CTCAG 1 cut(s) 67
BseXI GCAGC 1 cut(s) 22
BsiSI CCGG 1 cut(s) 114
BsmAI GTCTC 1 cut(s) 56
BsmI GAATGC 1 cut(s) 146
Bsp143I GATC 1 cut(s) 19
BspACI CCGC 1 cut(s) 38
BspCNI CTCAG 1 cut(s) 66
BssMI GATC 1 cut(s) 19
BstDEI CTNAG 1 cut(s) 53
BstKTI GATC 1 cut(s) 22
BstMAI GTCTC 1 cut(s) 56
BstMBI GATC 1 cut(s) 19
BstMWI GCNNNNNNNGC 1 cut(s) 32
BstSCI CCNGG 1 cut(s) 112
BstV1I GCAGC 1 cut(s) 22
BtrI CACGTC 1 cut(s) 95
CviJI RGCY 3 cut(s) 26, 35, 158
CviKI_1 RGCY 3 cut(s) 26, 35, 158
DdeI CTNAG 1 cut(s) 53
DpnI GATC 1 cut(s) 21
DpnII GATC 1 cut(s) 19
EcoT22I ATGCAT 1 cut(s) 6
FaiI YATR 2 cut(s) 106, 123
FauI CCCGC 1 cut(s) 31
Fnu4HI GCNGC 1 cut(s) 36
Fsp4HI GCNGC 1 cut(s) 36
GluI GCNGC 1 cut(s) 36
HapII CCGG 1 cut(s) 114
HincII GTYRAC 1 cut(s) 133
HindII GTYRAC 1 cut(s) 133
HpaI GTTAAC 1 cut(s) 133
HpaII CCGG 1 cut(s) 114
HphI GGTGA 1 cut(s) 29
Hpy166II GTNNAC 1 cut(s) 133
Hpy188I TCNGA 1 cut(s) 154
Hpy188III TCNNGA 1 cut(s) 84
Hpy8I GTNNAC 1 cut(s) 133
HpyCH4IV ACGT 1 cut(s) 94
HpyCH4V TGCA 1 cut(s) 4
HpyF10VI GCNNNNNNNGC 1 cut(s) 32
HpyF3I CTNAG 1 cut(s) 53
HpySE526I ACGT 1 cut(s) 94
KspAI GTTAAC 1 cut(s) 133
Kzo9I GATC 1 cut(s) 19
LpnPI CCDG 3 cut(s) 8, 40, 127
Lsp1109I GCAGC 1 cut(s) 22
LweI GCATC 1 cut(s) 13
MaeII ACGT 1 cut(s) 94
MalI GATC 1 cut(s) 21
MboI GATC 1 cut(s) 19
MluCI AATT 2 cut(s) 45, 137
MmeI TCCRAC 1 cut(s) 39
MnlI CCTC 2 cut(s) 55, 136
Mph1103I ATGCAT 1 cut(s) 6
MseI TTAA 1 cut(s) 132
MspI CCGG 1 cut(s) 114
MspR9I CCNGG 1 cut(s) 114
Mva1269I GAATGC 1 cut(s) 146
MwoI GCNNNNNNNGC 1 cut(s) 32
NciI CCSGG 1 cut(s) 114
NdeII GATC 1 cut(s) 19
NsiI ATGCAT 1 cut(s) 6
PcsI WCGNNNNNNNCGW 1 cut(s) 91
PctI GAATGC 1 cut(s) 146
PkrI GCNGC 1 cut(s) 37
SaqAI TTAA 1 cut(s) 132
SatI GCNGC 1 cut(s) 36
Sau3AI GATC 1 cut(s) 19
ScrFI CCNGG 1 cut(s) 114
SetI ASST 3 cut(s) 12, 59, 97
SfaNI GCATC 1 cut(s) 13
SgeI CNNG 9 cut(s) 23, 35, 39, 51, 67, 96, 105, 125, 126
Sse9I AATT 2 cut(s) 45, 137
SsiI CCGC 1 cut(s) 38
StyD4I CCNGG 1 cut(s) 112
TaiI ACGT 1 cut(s) 97
TaqI TCGA 1 cut(s) 85
TasI AATT 2 cut(s) 45, 137
Tru1I TTAA 1 cut(s) 132
Tru9I TTAA 1 cut(s) 132
TseI GCWGC 1 cut(s) 35
XapI RAATTY 2 cut(s) 45, 137
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.