Rmu_sc0043083.1_g000002
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0043083.1
N/A
Physical Location & Seq
Reverse (-)
1004 .. 1538
535 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0043083.1_g000002.1.cds

Sequence Viewer

Length: 341 bp
ctgatgttggtgatttgcaggcacctgtaaagatcagtacatatacgattggtcctttccaatctaatacaagtgagagggtgaaggtgaaggtcaaagttcgcttgaatgtacatgggatcgtatatgtagagtcagcaactgttttggaagaggaagaagttgaggttcctacaagaaaggttaagaaaacaaacattcctgtggtagagttagtttatggaggaatggctccagcagatgtgcagaaggcaatagaaagtgagtatgagatggctttacaagatcgtgttatggaaaaaacaaaagacaagaagacagtcatttctggaaatgtctag

Protein Analysis

112

Amino Acids

12.42

Weight (kDa)

5.9

Isoelectric Point (pI)

43.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 21
AclWI GGATC 1 cut(s) 127
AfaI GTAC 2 cut(s) 39, 113
AgsI TTSAA 1 cut(s) 108
AlwI GGATC 1 cut(s) 127
AlwNI CAGNNNCTG 1 cut(s) 142
AspS9I GGNCC 1 cut(s) 52
AsuHPI GGTGA 3 cut(s) 22, 93, 99
AvaII GGWCC 1 cut(s) 52
BanI GGYRCC 1 cut(s) 21
BbsI GAAGAC 1 cut(s) 322
BccI CCATC 1 cut(s) 267
BfaI CTAG 1 cut(s) 339
Bme18I GGWCC 1 cut(s) 52
BmgT120I GGNCC 1 cut(s) 52
BmiI GGNNCC 3 cut(s) 23, 170, 233
BpiI GAAGAC 1 cut(s) 322
BpmI CTGGAG 1 cut(s) 218
BsgI GTGCAG 1 cut(s) 265
BshNI GGYRCC 1 cut(s) 21
Bsp1407I TGTACA 1 cut(s) 111
Bsp143I GATC 3 cut(s) 32, 119, 285
BspLI GGNNCC 3 cut(s) 23, 170, 233
BspPI GGATC 1 cut(s) 127
BspT107I GGYRCC 1 cut(s) 21
BsrGI TGTACA 1 cut(s) 111
BssMI GATC 3 cut(s) 32, 119, 285
Bst4CI ACNGT 2 cut(s) 144, 321
Bst6I CTCTTC 1 cut(s) 146
BstAUI TGTACA 1 cut(s) 111
BstC8I GCNNGC 1 cut(s) 20
BstKTI GATC 3 cut(s) 35, 122, 288
BstMBI GATC 3 cut(s) 32, 119, 285
BstV2I GAAGAC 1 cut(s) 322
Cac8I GCNNGC 1 cut(s) 20
CaiI CAGNNNCTG 1 cut(s) 142
Cfr13I GGNCC 1 cut(s) 52
Csp6I GTAC 2 cut(s) 38, 112
CviAII CATG 1 cut(s) 115
CviJI RGCY 2 cut(s) 232, 277
CviKI_1 RGCY 2 cut(s) 232, 277
CviQI GTAC 2 cut(s) 38, 112
DpnI GATC 3 cut(s) 34, 121, 287
DpnII GATC 3 cut(s) 32, 119, 285
Eam1104I CTCTTC 1 cut(s) 146
EarI CTCTTC 1 cut(s) 146
Eco47I GGWCC 1 cut(s) 52
FaeI CATG 1 cut(s) 118
FaiI YATR 8 cut(s) 42, 44, 116, 126, 128, 221, 269, 295
FatI CATG 1 cut(s) 114
FspBI CTAG 1 cut(s) 339
GsuI CTGGAG 1 cut(s) 218
Hin1II CATG 1 cut(s) 118
HinfI GANTC 1 cut(s) 133
HphI GGTGA 3 cut(s) 22, 93, 99
Hpy188III TCNNGA 1 cut(s) 329
HpyAV CCTTC 3 cut(s) 78, 84, 243
HpyCH4III ACNGT 2 cut(s) 144, 321
HpyCH4V TGCA 2 cut(s) 18, 246
Hsp92II CATG 1 cut(s) 118
Kzo9I GATC 3 cut(s) 32, 119, 285
LmnI GCTCC 1 cut(s) 237
LpnPI CCDG 5 cut(s) 4, 38, 215, 248, 314
MaeI CTAG 1 cut(s) 339
MalI GATC 3 cut(s) 34, 121, 287
MboI GATC 3 cut(s) 32, 119, 285
MboII GAAGA 3 cut(s) 163, 169, 327
MlyI GAGTC 1 cut(s) 142
MnlI CCTC 4 cut(s) 71, 147, 159, 217
MseI TTAA 1 cut(s) 185
MslI CAYNNNNRTG 1 cut(s) 202
NdeII GATC 3 cut(s) 32, 119, 285
NlaIII CATG 1 cut(s) 118
NlaIV GGNNCC 3 cut(s) 23, 170, 233
PleI GAGTC 1 cut(s) 141
PpsI GAGTC 1 cut(s) 141
PspN4I GGNNCC 3 cut(s) 23, 170, 233
PspPI GGNCC 1 cut(s) 52
PstNI CAGNNNCTG 1 cut(s) 142
RsaI GTAC 2 cut(s) 39, 113
RsaNI GTAC 2 cut(s) 38, 112
RseI CAYNNNNRTG 1 cut(s) 202
SaqAI TTAA 1 cut(s) 185
Sau3AI GATC 3 cut(s) 32, 119, 285
Sau96I GGNCC 1 cut(s) 52
SchI GAGTC 1 cut(s) 142
SetI ASST 5 cut(s) 27, 89, 95, 170, 185
SinI GGWCC 1 cut(s) 52
SmiMI CAYNNNNRTG 1 cut(s) 202
SspMI CTAG 1 cut(s) 339
TaaI ACNGT 2 cut(s) 144, 321
TatI WGTACW 2 cut(s) 37, 111
Tru1I TTAA 1 cut(s) 185
Tru9I TTAA 1 cut(s) 185
VpaK11BI GGWCC 1 cut(s) 52
XspI CTAG 1 cut(s) 339
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.