Rmu_ssc0000027.1_g000011

Non-functional NADPH-dependent codeinone reductase 2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000027.1
N/A
Physical Location & Seq
Forward (+)
43293 .. 47092
3800 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1959 bp
atgacagcaacccaaatcccagtagtggttcttgaatcctccgatggccgcaggaccatgcctgtgcttggcttcggcacagcatccaacaatttacaaccagaggttttgatagaagctgttcttgaggccatcaagctcggttaccgccacttcgacacggcttccctgtacggctcggagcagagtctgggagtggccatagcccaagcactcaaactcagcctcgtggcttctcgggacgagctcttcatcacttccaagctttggactcttcaattggagtaccttgatctgtatctgattcactggcccatcagtggcacgcctgggaaagtgatggaatttcccgaggagaaggaccaaatgctgatggacttcaagggtgtgtggggagccatggaagaagctcagagacttggcctcaccaaatccattggaatcagtaatttctctaccaagaagactcagaatgtgctctcttttgctactattcctccttcagtcaaccaagttgagatgagcccattttggcaacaaaagaagctcagagacttctgcaaggccaacggtatacttgtgactgccttctccccattgggtgccataggagccagttggggtaccaatcatgttctcgaaagcaaagtgttcaatgaaatcgccgaggctcggggaaagactgtgtgcattagatgggtttatcaggtaggagcaactcttgcagtgaagagctacaacaaggagaggttgaagcagaatgtgcaggtgtttgactgggaattaacagaagaggatcttgagaagatcaatcaaatcccacagcgcaaaatgatggtccgagaagaagagttggttacggctaccggaccatacaagtcccttgatgagttttgggatggagaccttcaaatcccagaaacctccgccgcccaccttgaagctctcacctccaggagtccagaaccagaggcgctgcccccaaaaccggccggaatctacctgaaccggccaccggaagtgaccaaaccggcccccaaggagaatccgtcgatcctctgcctgatttcacatccttcccgtccaccgatcaccgctatcttttgtcagaagctgccacaccaacccaggatccaggaaccggtggaacttttccaggaaccggtcgacaagaccccaaaccctccggtagatcacctgacgtttccttgccggtctgcatctgccagattttctccagtcaagcccaacccagtcaacctacaacgcagcccaactgatccagccctgcgttcggcccaaaaccaatcaggcctagaggcccagaagacggaagcaagcccagcagcccagaggtttgccacgtcagcatccacacagtcagctgccatgtcatcatccggactgccacgtcagcaccccggtcaacgtcgcgcccccaatggaggacgcaaggagcgaaaccctaagagtaggaacaattctggacattctggtccatatgttcgccctaaggaggaaggaaatcgccgagagaggcgtgcacggaaccgtggaggtcaacgtgtgaaaagagagagaggcggaccctccgaccatggtggtaacgccaccaagagcataggtcgtccaaatcgcgccccaatggcgcctcgatcaagggagcctgaccataatgatgtttgttttcgatgtggatcaactgaacagtgggccaaaacatgtaccgcacctcagaatgttgcaaacgcatacaagacttatcgtgaagcaagggaagcaaattacatggaacaagaagatcaagatggcgatctagatctaaggggcactgtctctttccaccaccagcctagggctggcgcagtccctatccacgacgccatggatggcgtccatcatggtgatggcgccccagatgatgctgcaattaccaacttgcttcaaatagcgttttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00941 ko01110 map00941 map01110
Pfam Domains
Protein Families
Aldo_ket_red

Protein Analysis

652

Amino Acids

72.18

Weight (kDa)

8.6

Isoelectric Point (pI)

50.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 23 - 89 8.1e-09 Aldo/keto reductase family
Aldo_ket_red PF00248 91 - 273 3.7e-30 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 757
AasI GACNNNNNNGTC 2 cut(s) 1410, 1494
Acc36I ACCTGC 1 cut(s) 757
Acc65I GGTACC 1 cut(s) 623
AccB1I GGYRCC 4 cut(s) 602, 623, 1648, 1910
AccB7I CCANNNNNTGG 1 cut(s) 267
AccI GTMKAC 2 cut(s) 574, 1167
AccII CGCG 2 cut(s) 1434, 1638
AccIII TCCGGA 1 cut(s) 1400
AciI CCGC 7 cut(s) 49, 148, 927, 930, 1095, 1584, 1728
AclWI GGATC 6 cut(s) 804, 1048, 1126, 1139, 1274, 1705
AcoI YGGCCR 4 cut(s) 46, 198, 990, 1010
AcsI RAATTY 1 cut(s) 344
AcuI CTGAAG 1 cut(s) 486
AcyI GRCGYC 4 cut(s) 1649, 1881, 1893, 1911
AfaI GTAC 4 cut(s) 173, 287, 625, 1726
AflIII ACRYGT 2 cut(s) 1564, 1721
AgeI ACCGGT 2 cut(s) 1141, 1162
AgsI TTSAA 8 cut(s) 35, 278, 382, 655, 754, 911, 941, 1946
AjiI CACGTC 2 cut(s) 1365, 1412
AjnI CCWGG 5 cut(s) 328, 953, 1127, 1134, 1155
Alw21I GWGCWC 3 cut(s) 249, 480, 1546
Alw26I GTCTC 4 cut(s) 409, 546, 897, 1840
Alw44I GTGCAC 1 cut(s) 1542
AlwI GGATC 6 cut(s) 804, 1048, 1126, 1139, 1274, 1705
AlwNI CAGNNNCTG 2 cut(s) 190, 1114
Ama87I CYCGRG 3 cut(s) 237, 350, 672
Aor13HI TCCGGA 1 cut(s) 1400
ApaLI GTGCAC 1 cut(s) 1542
ApeKI GCWGC 6 cut(s) 976, 1114, 1269, 1346, 1385, 1925
ApoI RAATTY 1 cut(s) 344
ArsI GACNNNNNNTTYG 2 cut(s) 822, 854
AsiGI ACCGGT 2 cut(s) 1141, 1162
Asp700I GAANNNNTTC 1 cut(s) 120
Asp718I GGTACC 1 cut(s) 623
AspA2I CCTAGG 1 cut(s) 1853
AspLEI GCGC 7 cut(s) 828, 976, 1436, 1640, 1651, 1865, 1913
AsuC2I CCSGG 1 cut(s) 1422
AsuHPI GGTGA 5 cut(s) 418, 940, 1084, 1187, 1916
AvaI CYCGRG 3 cut(s) 237, 350, 672
AvaII GGWCC 6 cut(s) 54, 361, 838, 869, 1496, 1586
AvrII CCTAGG 1 cut(s) 1853
AxyI CCTNAGG 1 cut(s) 1512
BaeGI GKGCMC 2 cut(s) 1546, 1832
BalI TGGCCA 1 cut(s) 200
BamHI GGATCC 1 cut(s) 1131
BanI GGYRCC 4 cut(s) 602, 623, 1648, 1910
BanII GRGCYC 2 cut(s) 249, 527
BauI CACGAG 1 cut(s) 227
BbsI GAAGAC 2 cut(s) 470, 1334
Bbv12I GWGCWC 3 cut(s) 249, 480, 1546
BbvI GCAGC 6 cut(s) 963, 1101, 1281, 1358, 1372, 1912
BceAI ACGGC 3 cut(s) 177, 190, 876
BciT130I CCWGG 5 cut(s) 330, 955, 1129, 1136, 1157
BcnI CCSGG 1 cut(s) 1422
BcoDI GTCTC 4 cut(s) 409, 546, 897, 1840
BfaI CTAG 3 cut(s) 1316, 1817, 1854
BfoI RGCGCY 3 cut(s) 977, 1652, 1914
BfuAI ACCTGC 1 cut(s) 757
BglI GCCNNNNNGGC 1 cut(s) 1646
BglII AGATCT 1 cut(s) 1819
BisI GCNGC 8 cut(s) 49, 930, 977, 1115, 1270, 1347, 1386, 1926
BlnI CCTAGG 1 cut(s) 1853
BlsI GCNGC 8 cut(s) 50, 931, 978, 1116, 1271, 1348, 1387, 1927
Bme1390I CCNGG 6 cut(s) 330, 955, 1129, 1136, 1157, 1422
Bme18I GGWCC 6 cut(s) 54, 361, 838, 869, 1496, 1586
BmeT110I CYCGRG 3 cut(s) 237, 350, 672
BmgBI CACGTC 2 cut(s) 1365, 1412
BmrFI CCNGG 6 cut(s) 330, 955, 1129, 1136, 1157, 1422
BmrI ACTGGG 3 cut(s) 14, 787, 1247
BmsI GCATC 4 cut(s) 92, 1229, 1379, 1912
BmuI ACTGGG 3 cut(s) 14, 787, 1247
BpiI GAAGAC 2 cut(s) 470, 1334
BpmI CTGGAG 2 cut(s) 937, 1221
BpuEI CTTGAG 2 cut(s) 146, 821
BpuMI CCSGG 1 cut(s) 1422
BsaBI GATNNNNATC 4 cut(s) 297, 1696, 1812, 1818
BsaHI GRCGYC 4 cut(s) 1649, 1881, 1893, 1911
BsaI GGTCTC 1 cut(s) 897
BsaWI WCCGGW 6 cut(s) 866, 1015, 1141, 1162, 1186, 1400
BsaXI ACNNNNNCTCC 4 cut(s) 481, 511, 1034, 1064
Bse118I RCCGGY 6 cut(s) 988, 1008, 1030, 1141, 1162, 1212
Bse1I ACTGG 6 cut(s) 20, 314, 615, 782, 1238, 1253
Bse21I CCTNAGG 1 cut(s) 1512
Bse8I GATNNNNATC 4 cut(s) 297, 1696, 1812, 1818
BseAI TCCGGA 1 cut(s) 1400
BseBI CCWGG 5 cut(s) 330, 955, 1129, 1136, 1157
BseGI GGATG 6 cut(s) 83, 904, 1072, 1370, 1397, 1894
BseJI GATNNNNATC 4 cut(s) 297, 1696, 1812, 1818
BseMII CTCAG 5 cut(s) 235, 425, 482, 562, 1748
BseNI ACTGG 6 cut(s) 20, 314, 615, 782, 1238, 1253
BseRI GAGGAG 1 cut(s) 368
BseSI GKGCMC 2 cut(s) 1546, 1832
BseX3I CGGCCG 1 cut(s) 990
BseXI GCAGC 6 cut(s) 963, 1101, 1281, 1358, 1372, 1912
BseYI CCCAGC 1 cut(s) 1342
BsgI GTGCAG 1 cut(s) 785
Bsh1236I CGCG 2 cut(s) 1434, 1638
Bsh1285I CGRYCG 2 cut(s) 993, 1167
BshNI GGYRCC 4 cut(s) 602, 623, 1648, 1910
BshTI ACCGGT 2 cut(s) 1141, 1162
BsiEI CGRYCG 2 cut(s) 993, 1167
BsiHKAI GWGCWC 3 cut(s) 249, 480, 1546
BsiHKCI CYCGRG 3 cut(s) 237, 350, 672
BslFI GGGAC 3 cut(s) 254, 865, 1853
BsmAI GTCTC 4 cut(s) 409, 546, 897, 1840
BsmFI GGGAC 3 cut(s) 254, 865, 1853
Bso31I GGTCTC 1 cut(s) 897
BsoBI CYCGRG 3 cut(s) 237, 350, 672
Bsp1286I GDGCHC 5 cut(s) 249, 480, 527, 1546, 1832
Bsp13I TCCGGA 1 cut(s) 1400
Bsp19I CCATGG 3 cut(s) 399, 1597, 1884
BspACI CCGC 7 cut(s) 49, 148, 927, 930, 1095, 1584, 1728
BspCNI CTCAG 5 cut(s) 234, 424, 481, 561, 1747
BspEI TCCGGA 1 cut(s) 1400
BspFNI CGCG 2 cut(s) 1434, 1638
BspMI ACCTGC 1 cut(s) 757
BspPI GGATC 6 cut(s) 804, 1048, 1126, 1139, 1274, 1705
BspQI GCTCTTC 2 cut(s) 254, 725
BspT107I GGYRCC 4 cut(s) 602, 623, 1648, 1910
BspTNI GGTCTC 1 cut(s) 897
BsrFI RCCGGY 6 cut(s) 988, 1008, 1030, 1141, 1162, 1212
BsrI ACTGG 6 cut(s) 20, 314, 615, 782, 1238, 1253
BssAI RCCGGY 6 cut(s) 988, 1008, 1030, 1141, 1162, 1212
BssNAI GTATAC 1 cut(s) 575
BssNI GRCGYC 4 cut(s) 1649, 1881, 1893, 1911
BssSI CACGAG 1 cut(s) 227
BssT1I CCWWGG 5 cut(s) 399, 1038, 1597, 1853, 1884
Bst1107I GTATAC 1 cut(s) 575
Bst2BI CACGAG 1 cut(s) 227
Bst2UI CCWGG 5 cut(s) 330, 955, 1129, 1136, 1157
Bst4CI ACNGT 6 cut(s) 572, 685, 1380, 1553, 1710, 1834
Bst6I CTCTTC 5 cut(s) 254, 279, 725, 786, 843
BstACI GRCGYC 4 cut(s) 1649, 1881, 1893, 1911
BstAPI GCANNNNNTGC 2 cut(s) 722, 763
BstC8I GCNNGC 4 cut(s) 326, 1339, 1542, 1861
BstDEI CTNAG 8 cut(s) 221, 411, 468, 548, 1467, 1512, 1734, 1823
BstDSI CCRYGG 4 cut(s) 399, 1552, 1597, 1884
BstEII GGTNACC 1 cut(s) 143
BstF5I GGATG 6 cut(s) 83, 904, 1072, 1370, 1397, 1894
BstFNI CGCG 2 cut(s) 1434, 1638
BstH2I RGCGCY 3 cut(s) 977, 1652, 1914
BstHHI GCGC 7 cut(s) 828, 976, 1436, 1640, 1651, 1865, 1913
BstMAI GTCTC 4 cut(s) 409, 546, 897, 1840
BstMCI CGRYCG 2 cut(s) 993, 1167
BstMWI GCNNNNNNNGC 8 cut(s) 611, 722, 763, 1343, 1367, 1414, 1646, 1778
BstNI CCWGG 5 cut(s) 330, 955, 1129, 1136, 1157
BstNSI RCATGY 1 cut(s) 1725
BstPI GGTNACC 1 cut(s) 143
BstSCI CCNGG 6 cut(s) 328, 953, 1127, 1134, 1155, 1420
BstSLI GKGCMC 2 cut(s) 1546, 1832
BstUI CGCG 2 cut(s) 1434, 1638
BstV1I GCAGC 6 cut(s) 963, 1101, 1281, 1358, 1372, 1912
BstV2I GAAGAC 2 cut(s) 470, 1334
BstX2I RGATCY 3 cut(s) 796, 1131, 1819
BstYI RGATCY 3 cut(s) 796, 1131, 1819
BstZ17I GTATAC 1 cut(s) 575
BstZI CGGCCG 1 cut(s) 990
Bsu36I CCTNAGG 1 cut(s) 1512
BtgI CCRYGG 4 cut(s) 399, 1552, 1597, 1884
BtrI CACGTC 2 cut(s) 1365, 1412
BtsCI GGATG 6 cut(s) 83, 904, 1072, 1370, 1397, 1894
BtsI GCAGTG 1 cut(s) 732
BtsIMutI CAGTG 5 cut(s) 307, 325, 732, 1715, 1830
BveI ACCTGC 1 cut(s) 757
Cac8I GCNNGC 4 cut(s) 326, 1339, 1542, 1861
CaiI CAGNNNCTG 2 cut(s) 190, 1114
CfoI GCGC 7 cut(s) 828, 976, 1436, 1640, 1651, 1865, 1913
Cfr10I RCCGGY 6 cut(s) 988, 1008, 1030, 1141, 1162, 1212
CseI GACGC 3 cut(s) 1458, 1882, 1889
Csp6I GTAC 4 cut(s) 172, 286, 624, 1725
CspAI ACCGGT 2 cut(s) 1141, 1162
CviAII CATG 9 cut(s) 58, 400, 632, 1390, 1598, 1722, 1789, 1885, 1901
CviQI GTAC 4 cut(s) 172, 286, 624, 1725
DdeI CTNAG 8 cut(s) 221, 411, 468, 548, 1467, 1512, 1734, 1823
DinI GGCGCC 2 cut(s) 1650, 1912
DrdI GACNNNNNNGTC 2 cut(s) 1410, 1494
DseDI GACNNNNNNGTC 2 cut(s) 1410, 1494
EaeI YGGCCR 4 cut(s) 46, 198, 990, 1010
EagI CGGCCG 1 cut(s) 990
Eam1104I CTCTTC 5 cut(s) 254, 279, 725, 786, 843
EarI CTCTTC 5 cut(s) 254, 279, 725, 786, 843
EciI GGCGGA 2 cut(s) 916, 1599
Ecl136II GAGCTC 1 cut(s) 247
EclXI CGGCCG 1 cut(s) 990
Eco130I CCWWGG 5 cut(s) 399, 1038, 1597, 1853, 1884
Eco147I AGGCCT 1 cut(s) 1314
Eco24I GRGCYC 2 cut(s) 249, 527
Eco31I GGTCTC 1 cut(s) 897
Eco47I GGWCC 6 cut(s) 54, 361, 838, 869, 1496, 1586
Eco52I CGGCCG 1 cut(s) 990
Eco53kI GAGCTC 1 cut(s) 247
Eco57I CTGAAG 1 cut(s) 486
Eco81I CCTNAGG 1 cut(s) 1512
Eco88I CYCGRG 3 cut(s) 237, 350, 672
Eco91I GGTNACC 1 cut(s) 143
EcoICRI GAGCTC 1 cut(s) 247
EcoO65I GGTNACC 1 cut(s) 143
EcoRII CCWGG 5 cut(s) 328, 953, 1127, 1134, 1155
EcoT14I CCWWGG 5 cut(s) 399, 1038, 1597, 1853, 1884
EcoT38I GRGCYC 2 cut(s) 249, 527
EgeI GGCGCC 2 cut(s) 1650, 1912
EheI GGCGCC 2 cut(s) 1650, 1912
ErhI CCWWGG 5 cut(s) 399, 1038, 1597, 1853, 1884
FaeI CATG 9 cut(s) 61, 403, 635, 1393, 1601, 1725, 1792, 1888, 1904
FalI AAGNNNNNCTT 4 cut(s) 108, 140, 783, 815
FaqI GGGAC 3 cut(s) 254, 865, 1853
FatI CATG 9 cut(s) 57, 399, 631, 1389, 1597, 1721, 1788, 1884, 1900
FauNDI CATATG 1 cut(s) 1501
FblI GTMKAC 2 cut(s) 574, 1167
Fnu4HI GCNGC 8 cut(s) 49, 930, 977, 1115, 1270, 1347, 1386, 1926
FokI GGATG 6 cut(s) 70, 911, 1059, 1357, 1384, 1901
FriOI GRGCYC 2 cut(s) 249, 527
Fsp4HI GCNGC 8 cut(s) 49, 930, 977, 1115, 1270, 1347, 1386, 1926
FspBI CTAG 3 cut(s) 1316, 1817, 1854
GlaI GCGC 7 cut(s) 827, 975, 1435, 1639, 1650, 1864, 1912
GluI GCNGC 8 cut(s) 49, 930, 977, 1115, 1270, 1347, 1386, 1926
GsaI CCCAGC 1 cut(s) 1346
GsuI CTGGAG 2 cut(s) 937, 1221
HaeII RGCGCY 3 cut(s) 977, 1652, 1914
HgaI GACGC 3 cut(s) 1458, 1882, 1889
HhaI GCGC 7 cut(s) 828, 976, 1436, 1640, 1651, 1865, 1913
Hin1I GRCGYC 4 cut(s) 1649, 1881, 1893, 1911
Hin1II CATG 9 cut(s) 61, 403, 635, 1393, 1601, 1725, 1792, 1888, 1904
Hin6I GCGC 7 cut(s) 826, 974, 1434, 1638, 1649, 1863, 1911
HinP1I GCGC 7 cut(s) 826, 974, 1434, 1638, 1649, 1863, 1911
HincII GTYRAC 5 cut(s) 508, 1168, 1258, 1427, 1562
HindII GTYRAC 5 cut(s) 508, 1168, 1258, 1427, 1562
HindIII AAGCTT 1 cut(s) 263
HinfI GANTC 9 cut(s) 35, 187, 271, 304, 441, 466, 958, 996, 1045
HphI GGTGA 5 cut(s) 418, 940, 1084, 1187, 1916
Hpy166II GTNNAC 8 cut(s) 508, 575, 1085, 1168, 1258, 1427, 1544, 1562
Hpy8I GTNNAC 8 cut(s) 508, 575, 1085, 1168, 1258, 1427, 1544, 1562
Hpy99I CGWCG 3 cut(s) 1054, 1434, 1883
HpyAV CCTTC 6 cut(s) 352, 510, 598, 917, 1086, 1514
HpyCH4III ACNGT 6 cut(s) 572, 685, 1380, 1553, 1710, 1834
HpyCH4IV ACGT 5 cut(s) 1202, 1364, 1411, 1429, 1564
HpyCH4V TGCA 8 cut(s) 561, 690, 725, 766, 1220, 1544, 1745, 1928
HpyF10VI GCNNNNNNNGC 8 cut(s) 611, 722, 763, 1343, 1367, 1414, 1646, 1778
HpyF3I CTNAG 8 cut(s) 221, 411, 468, 548, 1467, 1512, 1734, 1823
HpySE526I ACGT 5 cut(s) 1202, 1364, 1411, 1429, 1564
Hsp92I GRCGYC 4 cut(s) 1649, 1881, 1893, 1911
Hsp92II CATG 9 cut(s) 61, 403, 635, 1393, 1601, 1725, 1792, 1888, 1904
HspAI GCGC 7 cut(s) 826, 974, 1434, 1638, 1649, 1863, 1911
KasI GGCGCC 2 cut(s) 1648, 1910
Kpn2I TCCGGA 1 cut(s) 1400
KpnI GGTACC 1 cut(s) 627
LguI GCTCTTC 2 cut(s) 254, 725
LmnI GCTCC 6 cut(s) 181, 395, 611, 713, 1456, 1663
Lsp1109I GCAGC 6 cut(s) 963, 1101, 1281, 1358, 1372, 1912
LweI GCATC 4 cut(s) 92, 1229, 1379, 1912
MaeI CTAG 3 cut(s) 1316, 1817, 1854
MaeII ACGT 5 cut(s) 1202, 1364, 1411, 1429, 1564
MaeIII GTNAC 5 cut(s) 143, 580, 856, 1021, 1604
MfeI CAATTG 1 cut(s) 278
MflI RGATCY 3 cut(s) 796, 1131, 1819
MhlI GDGCHC 5 cut(s) 249, 480, 527, 1546, 1832
MlsI TGGCCA 1 cut(s) 200
MluCI AATT 8 cut(s) 91, 278, 344, 448, 782, 1480, 1783, 1929
MluNI TGGCCA 1 cut(s) 200
Mly113I GGCGCC 2 cut(s) 1649, 1911
MlyI GAGTC 4 cut(s) 196, 265, 460, 967
MmeI TCCRAC 2 cut(s) 111, 1617
Mox20I TGGCCA 1 cut(s) 200
MroI TCCGGA 1 cut(s) 1400
MroXI GAANNNNTTC 1 cut(s) 120
MscI TGGCCA 1 cut(s) 200
MseI TTAA 1 cut(s) 785
MslI CAYNNNNRTG 4 cut(s) 62, 1677, 1902, 1905
Msp20I TGGCCA 1 cut(s) 200
MspA1I CMGCKG 1 cut(s) 1385
MspR9I CCNGG 6 cut(s) 330, 955, 1129, 1136, 1157, 1422
MunI CAATTG 1 cut(s) 278
MvaI CCWGG 5 cut(s) 330, 955, 1129, 1136, 1157
MvnI CGCG 2 cut(s) 1434, 1638
MwoI GCNNNNNNNGC 8 cut(s) 611, 722, 763, 1343, 1367, 1414, 1646, 1778
NarI GGCGCC 2 cut(s) 1649, 1911
NciI CCSGG 1 cut(s) 1422
NcoI CCATGG 3 cut(s) 399, 1597, 1884
NdeI CATATG 1 cut(s) 1501
NlaIII CATG 9 cut(s) 61, 403, 635, 1393, 1601, 1725, 1792, 1888, 1904
NmeAIII GCCGAG 2 cut(s) 691, 1556
NmuCI GTSAC 2 cut(s) 580, 1021
NspI RCATGY 1 cut(s) 1725
PaqCI CACCTGC 1 cut(s) 757
PceI AGGCCT 1 cut(s) 1314
PciI ACATGT 1 cut(s) 1721
PciSI GCTCTTC 2 cut(s) 254, 725
PcsI WCGNNNNNNNCGW 1 cut(s) 1456
PdmI GAANNNNTTC 1 cut(s) 120
PfeI GAWTC 5 cut(s) 35, 304, 441, 996, 1045
PflMI CCANNNNNTGG 1 cut(s) 267
PfoI TCCNGGA 3 cut(s) 953, 1134, 1155
PinAI ACCGGT 2 cut(s) 1141, 1162
PkrI GCNGC 8 cut(s) 50, 931, 978, 1116, 1271, 1348, 1387, 1927
PleI GAGTC 4 cut(s) 195, 265, 460, 966
PluTI GGCGCC 2 cut(s) 1652, 1914
PpsI GAGTC 4 cut(s) 195, 265, 460, 966
PscI ACATGT 1 cut(s) 1721
Psp124BI GAGCTC 1 cut(s) 249
Psp6I CCWGG 5 cut(s) 328, 953, 1127, 1134, 1155
PspEI GGTNACC 1 cut(s) 143
PspFI CCCAGC 1 cut(s) 1342
PspGI CCWGG 5 cut(s) 328, 953, 1127, 1134, 1155
PstNI CAGNNNCTG 2 cut(s) 190, 1114
PsuI RGATCY 3 cut(s) 796, 1131, 1819
PvuII CAGCTG 1 cut(s) 1385
RsaI GTAC 4 cut(s) 173, 287, 625, 1726
RsaNI GTAC 4 cut(s) 172, 286, 624, 1725
RseI CAYNNNNRTG 4 cut(s) 62, 1677, 1902, 1905
SacI GAGCTC 1 cut(s) 249
SalI GTCGAC 1 cut(s) 1166
SapI GCTCTTC 2 cut(s) 254, 725
SaqAI TTAA 1 cut(s) 785
SatI GCNGC 8 cut(s) 49, 930, 977, 1115, 1270, 1347, 1386, 1926
SchI GAGTC 4 cut(s) 196, 265, 460, 967
ScrFI CCNGG 6 cut(s) 330, 955, 1129, 1136, 1157, 1422
SduI GDGCHC 5 cut(s) 249, 480, 527, 1546, 1832
SfaNI GCATC 4 cut(s) 92, 1229, 1379, 1912
SfoI GGCGCC 2 cut(s) 1650, 1912
SinI GGWCC 6 cut(s) 54, 361, 838, 869, 1496, 1586
SmiMI CAYNNNNRTG 4 cut(s) 62, 1677, 1902, 1905
SmlI CTYRAG 2 cut(s) 125, 800
SmoI CTYRAG 2 cut(s) 125, 800
Sse9I AATT 8 cut(s) 91, 278, 344, 448, 782, 1480, 1783, 1929
SseBI AGGCCT 1 cut(s) 1314
SsiI CCGC 7 cut(s) 49, 148, 927, 930, 1095, 1584, 1728
SspDI GGCGCC 2 cut(s) 1648, 1910
SspMI CTAG 3 cut(s) 1316, 1817, 1854
SstI GAGCTC 1 cut(s) 249
StuI AGGCCT 1 cut(s) 1314
StyD4I CCNGG 6 cut(s) 328, 953, 1127, 1134, 1155, 1420
StyI CCWWGG 5 cut(s) 399, 1038, 1597, 1853, 1884
TaaI ACNGT 6 cut(s) 572, 685, 1380, 1553, 1710, 1834
TaiI ACGT 5 cut(s) 1205, 1367, 1414, 1432, 1567
TaqI TCGA 6 cut(s) 156, 639, 1052, 1167, 1654, 1690
TasI AATT 8 cut(s) 91, 278, 344, 448, 782, 1480, 1783, 1929
TauI GCSGC 2 cut(s) 51, 932
TfiI GAWTC 5 cut(s) 35, 304, 441, 996, 1045
Tru1I TTAA 1 cut(s) 785
Tru9I TTAA 1 cut(s) 785
TscAI CASTG 5 cut(s) 314, 325, 732, 1715, 1837
TseFI GTSAC 2 cut(s) 580, 1021
TseI GCWGC 6 cut(s) 976, 1114, 1269, 1346, 1385, 1925
Tsp45I GTSAC 2 cut(s) 580, 1021
TspDTI ATGAA 2 cut(s) 241, 672
TspGWI ACGGA 3 cut(s) 1038, 1346, 1561
TspRI CASTG 5 cut(s) 314, 325, 732, 1715, 1837
Van91I CCANNNNNTGG 1 cut(s) 267
VneI GTGCAC 1 cut(s) 1542
VpaK11BI GGWCC 6 cut(s) 54, 361, 838, 869, 1496, 1586
XapI RAATTY 1 cut(s) 344
XbaI TCTAGA 1 cut(s) 1816
XceI RCATGY 1 cut(s) 1725
XcmI CCANNNNNNNNNTGG 2 cut(s) 1856, 1904
XmaJI CCTAGG 1 cut(s) 1853
XmiI GTMKAC 2 cut(s) 574, 1167
XmnI GAANNNNTTC 1 cut(s) 120
XspI CTAG 3 cut(s) 1316, 1817, 1854
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.