Rmu_ssc0000150.1_g000030

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000150.1
N/A
Physical Location & Seq
Reverse (-)
147590 .. 152136
4547 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1536 bp
atggaggatgtagggaaaccaaacttggcagacttttctcctgtgctcaggaagcttgaccctcaaggcataaggcggcacctggccaattatttccagaaaacggtggtctacttcgaccacctgatcaatcaaaggaatagccccggctattttaagccagagaggttcttggggttggagaatgaaattgatgttatgggaagaaactttgagcttattccatttggtggtgggaggagaatatgtccggggttgcctttggcattgagaatgttacacttgatattagggttggtcattaactgctttgaatggaagctcgaagatggtgttgtaccaaagactatgaacatggaggagaagtttggcatcaacttaagaatggctcagcctcttagagctgtgcccatgccaacaaacctcagtgtctgtttggtggtgccagagggtcggacagatccggttctaggatcttggtggcgggatttggcgctgttggatcgaggcggatcagaggcgcttcctgggcagttgataccgacgtggctggggtctaggtgggaaggcggatctcagtgcggtggtgttggtagcgggacggggagcggcggctctcgggttgcagttttggattgtgttgattgcgattggtggtgggcagctttgcgttcaactcacttcaccatgatcgcgcttgatactgatcgaggtcggccacctgagatggtggtggcggcggtggcaggttggcagcgagggcacatgtctcgggctagcctcgttgcctgggtcgggggcttttggtctgggcttgggtcatctgagctcagtctcccttgggcccagttgagtagggcctttacggtctgtaaagtgccagtcgcaattcagatcatggttctatggaattgctttccaaaccctagccacagcctccctgctccccctgctgcaagcctgcagcccctgcttccttcctactgctcctgccgcaagcctgcagcccctgctgccttcctgctactcctgccgcaagcctgctccctccttgctgtagaaactaatgtccaaattgctgcaaaaactgctgccaaactgctacttactgctgccaaactgctacttactgctatccaaactgctgcccaaactgctgcagaaactgttgccaaattgctgcagaaactgctacttgctgctgtccaaattgctgcagaaactgctgcccaaacagctgcagaaactgctgccaaactgctgcagaaactgcttcttgctgctgtcacttattgctgctgccccaaaacacgcctgctccaacacgcgcatagcattggtttaagcactaaaatgcgagtggaaaaacaaaagctgcacaatacaaggtgtataaaagatatgagagagcatgaggctcatctcgcagccgaaggagatgatggagatgacaatgacaatgaagtcaatctcatcattacagacttcaaatctggtgaggaaaacaacaatgttgatgccgcagattttgattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

511

Amino Acids

55.64

Weight (kDa)

7.13

Isoelectric Point (pI)

37.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 48 - 123 9.4e-14 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1463
Acc36I ACCTGC 1 cut(s) 737
AccB1I GGYRCC 2 cut(s) 78, 442
AccB7I CCANNNNNTGG 1 cut(s) 230
AccBSI CCGCTC 1 cut(s) 609
AccI GTMKAC 1 cut(s) 111
AccII CGCG 2 cut(s) 695, 1328
AclWI GGATC 5 cut(s) 455, 481, 510, 520, 580
AcoI YGGCCR 2 cut(s) 84, 716
AfaI GTAC 1 cut(s) 339
AfiI CCNNNNNNNGG 4 cut(s) 103, 230, 470, 795
AflII CTTAAG 1 cut(s) 379
AflIII ACRYGT 1 cut(s) 765
AgsI TTSAA 3 cut(s) 314, 675, 1489
AjiI CACGTC 1 cut(s) 546
AjnI CCWGG 3 cut(s) 81, 526, 788
AjuI GAANNNNNNNTTGG 2 cut(s) 8, 40
AluBI AGCT 8 cut(s) 55, 217, 322, 404, 665, 829, 1238, 1375
AluI AGCT 8 cut(s) 55, 217, 322, 404, 665, 829, 1238, 1375
Alw21I GWGCWC 2 cut(s) 48, 831
Alw26I GTCTC 2 cut(s) 774, 839
AlwI GGATC 5 cut(s) 455, 481, 510, 520, 580
AlwNI CAGNNNCTG 8 cut(s) 432, 970, 1010, 1166, 1189, 1223, 1247, 1270
Ama87I CYCGRG 2 cut(s) 618, 771
AoxI GGCC 4 cut(s) 84, 716, 843, 858
ApaI GGGCCC 1 cut(s) 847
AspLEI GCGC 4 cut(s) 496, 523, 697, 1330
AspS9I GGNCC 3 cut(s) 843, 844, 858
AsuC2I CCSGG 2 cut(s) 147, 252
AsuHPI GGTGA 2 cut(s) 676, 1508
AsuNHI GCTAGC 1 cut(s) 776
AvaI CYCGRG 2 cut(s) 618, 771
BaeGI GKGCMC 3 cut(s) 411, 765, 847
BaeI ACNNNNGTAYC 2 cut(s) 530, 563
BalI TGGCCA 1 cut(s) 86
BanI GGYRCC 2 cut(s) 78, 442
BanII GRGCYC 2 cut(s) 831, 847
Bbv12I GWGCWC 2 cut(s) 48, 831
BccI CCATC 3 cut(s) 323, 721, 1436
BcgI CGANNNNNNTGC 2 cut(s) 752, 786
BciT130I CCWGG 3 cut(s) 83, 528, 790
BclI TGATCA 1 cut(s) 126
BcnI CCSGG 2 cut(s) 147, 252
BcoDI GTCTC 2 cut(s) 774, 839
BfaI CTAG 4 cut(s) 470, 558, 777, 927
BfmI CTRYAG 8 cut(s) 962, 1002, 1056, 1158, 1181, 1215, 1239, 1262
BfoI RGCGCY 2 cut(s) 497, 524
BfrI CTTAAG 1 cut(s) 379
BfuAI ACCTGC 1 cut(s) 737
BlpI GCTNAGC 1 cut(s) 390
Bme1390I CCNGG 5 cut(s) 83, 147, 252, 528, 790
BmeT110I CYCGRG 2 cut(s) 618, 771
BmgBI CACGTC 1 cut(s) 546
BmgT120I GGNCC 3 cut(s) 843, 844, 858
BmiI GGNNCC 3 cut(s) 80, 444, 845
BmrFI CCNGG 5 cut(s) 83, 147, 252, 528, 790
BmrI ACTGGG 1 cut(s) 841
BmsI GCATC 2 cut(s) 381, 1507
BmtI GCTAGC 1 cut(s) 780
BmuI ACTGGG 1 cut(s) 841
Bpu10I CCTNAGC 1 cut(s) 47
Bpu1102I GCTNAGC 1 cut(s) 390
BpuEI CTTGAG 1 cut(s) 48
BpuMI CCSGG 2 cut(s) 147, 252
BsaBI GATNNNNATC 1 cut(s) 705
BsaJI CCNNGG 5 cut(s) 145, 251, 527, 789, 839
BsaWI WCCGGW 1 cut(s) 463
BsaXI ACNNNNNCTCC 6 cut(s) 232, 262, 350, 380, 1302, 1332
Bsc4I CCNNNNNNNGG 4 cut(s) 103, 230, 470, 795
Bse1I ACTGG 2 cut(s) 847, 881
Bse8I GATNNNNATC 1 cut(s) 705
BseBI CCWGG 3 cut(s) 83, 528, 790
BseDI CCNNGG 5 cut(s) 145, 251, 527, 789, 839
BseGI GGATG 1 cut(s) 13
BseJI GATNNNNATC 1 cut(s) 705
BseLI CCNNNNNNNGG 4 cut(s) 103, 230, 470, 795
BseMII CTCAG 7 cut(s) 61, 404, 439, 590, 714, 816, 844
BseNI ACTGG 2 cut(s) 847, 881
BseRI GAGGAG 2 cut(s) 253, 374
BseSI GKGCMC 3 cut(s) 411, 765, 847
BseYI CCCAGC 1 cut(s) 550
BsgI GTGCAG 1 cut(s) 1361
Bsh1236I CGCG 2 cut(s) 695, 1328
BshFI GGCC 4 cut(s) 86, 718, 845, 860
BshNI GGYRCC 2 cut(s) 78, 442
BsiHKAI GWGCWC 2 cut(s) 48, 831
BsiHKCI CYCGRG 2 cut(s) 618, 771
BsiSI CCGG 3 cut(s) 147, 251, 464
BslFI GGGAC 1 cut(s) 613
BslI CCNNNNNNNGG 4 cut(s) 103, 230, 470, 795
BsmAI GTCTC 2 cut(s) 774, 839
BsmFI GGGAC 1 cut(s) 613
BsnI GGCC 4 cut(s) 86, 718, 845, 860
BsoBI CYCGRG 2 cut(s) 618, 771
Bsp120I GGGCCC 1 cut(s) 843
Bsp1286I GDGCHC 5 cut(s) 48, 411, 765, 831, 847
Bsp143I GATC 9 cut(s) 126, 460, 473, 502, 512, 572, 690, 706, 894
Bsp1720I GCTNAGC 1 cut(s) 390
BspANI GGCC 4 cut(s) 86, 718, 845, 860
BspCNI CTCAG 7 cut(s) 60, 403, 438, 589, 715, 817, 843
BspFNI CGCG 2 cut(s) 695, 1328
BspLI GGNNCC 3 cut(s) 80, 444, 845
BspMAI CTGCAG 7 cut(s) 966, 1006, 1162, 1185, 1219, 1243, 1266
BspMI ACCTGC 1 cut(s) 737
BspOI GCTAGC 1 cut(s) 780
BspPI GGATC 5 cut(s) 455, 481, 510, 520, 580
BspT107I GGYRCC 2 cut(s) 78, 442
BspTI CTTAAG 1 cut(s) 379
BsrBI CCGCTC 1 cut(s) 609
BsrI ACTGG 2 cut(s) 847, 881
BssECI CCNNGG 5 cut(s) 145, 251, 527, 789, 839
BssMI GATC 9 cut(s) 126, 460, 473, 502, 512, 572, 690, 706, 894
BssT1I CCWWGG 1 cut(s) 839
Bst2UI CCWGG 3 cut(s) 83, 528, 790
Bst4CI ACNGT 3 cut(s) 106, 868, 1168
BstAFI CTTAAG 1 cut(s) 379
BstAPI GCANNNNNTGC 7 cut(s) 970, 1010, 1088, 1189, 1223, 1247, 1270
BstC8I GCNNGC 8 cut(s) 778, 958, 962, 998, 1002, 1038, 1042, 1316
BstDEI CTNAG 8 cut(s) 47, 390, 398, 425, 576, 723, 825, 830
BstF5I GGATG 1 cut(s) 13
BstFNI CGCG 2 cut(s) 695, 1328
BstH2I RGCGCY 2 cut(s) 497, 524
BstHHI GCGC 4 cut(s) 496, 523, 697, 1330
BstKTI GATC 9 cut(s) 129, 463, 476, 505, 515, 575, 693, 709, 897
BstMAI GTCTC 2 cut(s) 774, 839
BstMBI GATC 9 cut(s) 126, 460, 473, 502, 512, 572, 690, 706, 894
BstNI CCWGG 3 cut(s) 83, 528, 790
BstNSI RCATGY 1 cut(s) 769
BstSCI CCNGG 5 cut(s) 81, 145, 250, 526, 788
BstSFI CTRYAG 8 cut(s) 962, 1002, 1056, 1158, 1181, 1215, 1239, 1262
BstSLI GKGCMC 3 cut(s) 411, 765, 847
BstUI CGCG 2 cut(s) 695, 1328
BstX2I RGATCY 3 cut(s) 460, 473, 572
BstYI RGATCY 3 cut(s) 460, 473, 572
BsuRI GGCC 4 cut(s) 86, 718, 845, 860
BtrI CACGTC 1 cut(s) 546
BtsCI GGATG 1 cut(s) 13
BtsIMutI CAGTG 2 cut(s) 433, 584
BveI ACCTGC 1 cut(s) 737
Cac8I GCNNGC 8 cut(s) 778, 958, 962, 998, 1002, 1038, 1042, 1316
CaiI CAGNNNCTG 8 cut(s) 432, 970, 1010, 1166, 1189, 1223, 1247, 1270
CfoI GCGC 4 cut(s) 496, 523, 697, 1330
Cfr13I GGNCC 3 cut(s) 843, 844, 858
Csp6I GTAC 1 cut(s) 338
CviAII CATG 6 cut(s) 355, 412, 688, 766, 898, 1412
CviQI GTAC 1 cut(s) 338
DdeI CTNAG 8 cut(s) 47, 390, 398, 425, 576, 723, 825, 830
DpnI GATC 9 cut(s) 128, 462, 475, 504, 514, 574, 692, 708, 896
DpnII GATC 9 cut(s) 126, 460, 473, 502, 512, 572, 690, 706, 894
DrdI GACNNNNNNGTC 1 cut(s) 1463
DseDI GACNNNNNNGTC 1 cut(s) 1463
EaeI YGGCCR 2 cut(s) 84, 716
EciI GGCGGA 2 cut(s) 525, 585
Ecl136II GAGCTC 1 cut(s) 829
Eco130I CCWWGG 1 cut(s) 839
Eco24I GRGCYC 2 cut(s) 831, 847
Eco53kI GAGCTC 1 cut(s) 829
Eco88I CYCGRG 2 cut(s) 618, 771
EcoICRI GAGCTC 1 cut(s) 829
EcoO109I RGGNCCY 1 cut(s) 858
EcoRII CCWGG 3 cut(s) 81, 526, 788
EcoT14I CCWWGG 1 cut(s) 839
EcoT38I GRGCYC 2 cut(s) 831, 847
ErhI CCWWGG 1 cut(s) 839
FaeI CATG 6 cut(s) 358, 415, 691, 769, 901, 1415
FaqI GGGAC 1 cut(s) 613
FatI CATG 6 cut(s) 354, 411, 687, 765, 897, 1411
FauI CCCGC 2 cut(s) 477, 590
FbaI TGATCA 1 cut(s) 126
FblI GTMKAC 1 cut(s) 111
FokI GGATG 1 cut(s) 20
FriOI GRGCYC 2 cut(s) 831, 847
FspBI CTAG 4 cut(s) 470, 558, 777, 927
GlaI GCGC 4 cut(s) 495, 522, 696, 1329
GsaI CCCAGC 1 cut(s) 554
HaeII RGCGCY 2 cut(s) 497, 524
HaeIII GGCC 4 cut(s) 86, 718, 845, 860
HapII CCGG 3 cut(s) 147, 251, 464
HhaI GCGC 4 cut(s) 496, 523, 697, 1330
Hin1II CATG 6 cut(s) 358, 415, 691, 769, 901, 1415
Hin6I GCGC 4 cut(s) 494, 521, 695, 1328
HinP1I GCGC 4 cut(s) 494, 521, 695, 1328
HindIII AAGCTT 1 cut(s) 53
HpaII CCGG 3 cut(s) 147, 251, 464
HphI GGTGA 2 cut(s) 676, 1508
Hpy166II GTNNAC 1 cut(s) 112
Hpy188I TCNGA 4 cut(s) 456, 517, 826, 894
Hpy188III TCNNGA 2 cut(s) 49, 97
Hpy8I GTNNAC 1 cut(s) 112
Hpy99I CGWCG 1 cut(s) 547
HpyAV CCTTC 4 cut(s) 560, 987, 1027, 1427
HpyCH4III ACNGT 3 cut(s) 106, 868, 1168
HpyCH4IV ACGT 1 cut(s) 545
HpyF3I CTNAG 8 cut(s) 47, 390, 398, 425, 576, 723, 825, 830
HpySE526I ACGT 1 cut(s) 545
Hsp92II CATG 6 cut(s) 358, 415, 691, 769, 901, 1415
HspAI GCGC 4 cut(s) 494, 521, 695, 1328
Ksp22I TGATCA 1 cut(s) 126
Kzo9I GATC 9 cut(s) 126, 460, 473, 502, 512, 572, 690, 706, 894
LmnI GCTCC 5 cut(s) 606, 949, 992, 1049, 1323
LweI GCATC 2 cut(s) 381, 1507
MaeI CTAG 4 cut(s) 470, 558, 777, 927
MaeII ACGT 1 cut(s) 545
MaeIII GTNAC 2 cut(s) 276, 1285
MalI GATC 9 cut(s) 128, 462, 475, 504, 514, 574, 692, 708, 896
MbiI CCGCTC 1 cut(s) 609
MboI GATC 9 cut(s) 126, 460, 473, 502, 512, 572, 690, 706, 894
MboII GAAGA 2 cut(s) 216, 338
MflI RGATCY 3 cut(s) 460, 473, 572
MhlI GDGCHC 5 cut(s) 48, 411, 765, 831, 847
MlsI TGGCCA 1 cut(s) 86
MluCI AATT 7 cut(s) 88, 189, 888, 910, 1074, 1175, 1209
MluNI TGGCCA 1 cut(s) 86
MmeI TCCRAC 4 cut(s) 159, 434, 480, 1345
Mox20I TGGCCA 1 cut(s) 86
MscI TGGCCA 1 cut(s) 86
MseI TTAA 5 cut(s) 156, 303, 380, 1343, 1534
MslI CAYNNNNRTG 1 cut(s) 1352
Msp20I TGGCCA 1 cut(s) 86
MspA1I CMGCKG 1 cut(s) 1238
MspCI CTTAAG 1 cut(s) 379
MspI CCGG 3 cut(s) 147, 251, 464
MspR9I CCNGG 5 cut(s) 83, 147, 252, 528, 790
MvaI CCWGG 3 cut(s) 83, 528, 790
MvnI CGCG 2 cut(s) 695, 1328
NciI CCSGG 2 cut(s) 147, 252
NdeII GATC 9 cut(s) 126, 460, 473, 502, 512, 572, 690, 706, 894
NheI GCTAGC 1 cut(s) 776
NlaIII CATG 6 cut(s) 358, 415, 691, 769, 901, 1415
NlaIV GGNNCC 3 cut(s) 80, 444, 845
NmuCI GTSAC 1 cut(s) 1285
NspI RCATGY 1 cut(s) 769
PciI ACATGT 1 cut(s) 765
PflMI CCANNNNNTGG 1 cut(s) 230
PscI ACATGT 1 cut(s) 765
Psp124BI GAGCTC 1 cut(s) 831
Psp6I CCWGG 3 cut(s) 81, 526, 788
PspFI CCCAGC 1 cut(s) 550
PspGI CCWGG 3 cut(s) 81, 526, 788
PspN4I GGNNCC 3 cut(s) 80, 444, 845
PspOMI GGGCCC 1 cut(s) 843
PspPI GGNCC 3 cut(s) 843, 844, 858
PstI CTGCAG 7 cut(s) 966, 1006, 1162, 1185, 1219, 1243, 1266
PstNI CAGNNNCTG 8 cut(s) 432, 970, 1010, 1166, 1189, 1223, 1247, 1270
PsuI RGATCY 3 cut(s) 460, 473, 572
PvuII CAGCTG 1 cut(s) 1238
RsaI GTAC 1 cut(s) 339
RsaNI GTAC 1 cut(s) 338
RseI CAYNNNNRTG 1 cut(s) 1352
SacI GAGCTC 1 cut(s) 831
SaqAI TTAA 5 cut(s) 156, 303, 380, 1343, 1534
Sau3AI GATC 9 cut(s) 126, 460, 473, 502, 512, 572, 690, 706, 894
Sau96I GGNCC 3 cut(s) 843, 844, 858
ScrFI CCNGG 5 cut(s) 83, 147, 252, 528, 790
SduI GDGCHC 5 cut(s) 48, 411, 765, 831, 847
SfaNI GCATC 2 cut(s) 381, 1507
SfcI CTRYAG 8 cut(s) 962, 1002, 1056, 1158, 1181, 1215, 1239, 1262
SmiMI CAYNNNNRTG 1 cut(s) 1352
SmlI CTYRAG 2 cut(s) 63, 379
SmoI CTYRAG 2 cut(s) 63, 379
Sse9I AATT 7 cut(s) 88, 189, 888, 910, 1074, 1175, 1209
SspMI CTAG 4 cut(s) 470, 558, 777, 927
SstI GAGCTC 1 cut(s) 831
StyD4I CCNGG 5 cut(s) 81, 145, 250, 526, 788
StyI CCWWGG 1 cut(s) 839
TaaI ACNGT 3 cut(s) 106, 868, 1168
TaiI ACGT 1 cut(s) 548
TaqI TCGA 4 cut(s) 117, 324, 505, 709
TasI AATT 7 cut(s) 88, 189, 888, 910, 1074, 1175, 1209
TauI GCSGC 7 cut(s) 79, 612, 615, 740, 996, 1036, 1523
Tru1I TTAA 5 cut(s) 156, 303, 380, 1343, 1534
Tru9I TTAA 5 cut(s) 156, 303, 380, 1343, 1534
TscAI CASTG 2 cut(s) 433, 584
TseFI GTSAC 1 cut(s) 1285
Tsp45I GTSAC 1 cut(s) 1285
TspDTI ATGAA 3 cut(s) 201, 365, 1476
TspRI CASTG 2 cut(s) 433, 584
Van91I CCANNNNNTGG 1 cut(s) 230
Vha464I CTTAAG 1 cut(s) 379
XceI RCATGY 1 cut(s) 769
XmiI GTMKAC 1 cut(s) 111
XspI CTAG 4 cut(s) 470, 558, 777, 927
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.