Rmu_ssc0000183.1_g000032

subtilisin-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000183.1
N/A
Physical Location & Seq
Forward (+)
151758 .. 153159
1402 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1167 bp
atgttaatggtgtttattaggactaacggctccagcaatctgtgcttgcccggttcgctccaaccggagtcggtacgtgggaaagtggtaatttgcgacaggggagttaacgcacgtgtggagaaaggtggagttgtacgcgccgcgggtggggttgggatgatactcgccaacaccgccgcgagcggagaggaaatggtggcggacagtcacttgttaccggctgttgcggttgggaggaaggtgggtgacttgataaggcagtatgcacagtcagatccgaatccgacggcggtgattagctttggtgggacggtgctgaatgtgcggccgtcgccggttgtggcggcgtttagctctcgtgggccaaatttggttactccccagatcttgaagcccgatgtgattggtccaggggttaacatcttggctggatggtcagaggctattgggcccactgggcttgcggaggactctaggaagagtcagttcaacatcatgtcaggtacatctatgtcatgcccacacataagtgggcttgcagcattgctcaaagcggcccatcccaattggagcccaagtgcaatcaaatccgctctcatgactacagcgtacacacatgacaacaccatgtctcctctccgtgatgctgccggtggcacattttcgaatccgtgggcacatggttctggccatgtcgatccctcgaaagccgtcacgccaggtcttgtatacgacatttcgagcgatgactatgttgcatttttgtgctcgctggactacaccatcgatcatgtccaagccattgctaagagaaacgttacatgcgcaagaaagtactctaatcctggacaactcaactacccttcattctcagttgtgtttgggaacaagagggttgtgagatacagtcgagaattgacaaatgtagggactgcaggttctttatacaaggtcattgtgagcggaccacccggagtgaagactattgttaaaccctcaaggcttttctttgcaactgtaggggagaagaagaagtacacagtcacctttgtgtctgccaagggcggcattagaacatcaaggtcagaatttggttcgatcatgtgggcaaaccccctacacctcgttaagagcccagttgcttttgcatggacgctgttgtga

Protein Analysis

388

Amino Acids

40.98

Weight (kDa)

9.7

Isoelectric Point (pI)

37.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PA PF02225 15 - 85 4.3e-12 PA domain
Peptidase_S8 PF00082 106 - 208 5.3e-21 Subtilase family
fn3_6 PF17766 285 - 382 2.2e-23 Fibronectin type-III domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 829
Acc36I ACCTGC 1 cut(s) 929
AccBSI CCGCTC 3 cut(s) 186, 596, 966
AccI GTMKAC 1 cut(s) 732
AccII CGCG 3 cut(s) 141, 146, 182
AclI AACGTT 1 cut(s) 819
AclWI GGATC 2 cut(s) 272, 695
AcoI YGGCCR 2 cut(s) 329, 691
AcsI RAATTY 2 cut(s) 370, 1091
AcvI CACGTG 1 cut(s) 116
AfaI GTAC 6 cut(s) 75, 138, 508, 614, 839, 1040
AfiI CCNNNNNNNGG 1 cut(s) 150
AflIII ACRYGT 1 cut(s) 115
AgsI TTSAA 2 cut(s) 394, 493
AjnI CCWGG 3 cut(s) 412, 721, 847
AleI CACNNNNGTG 2 cut(s) 531, 1052
AloI GAACNNNNNNTCC 2 cut(s) 925, 957
AluBI AGCT 2 cut(s) 303, 357
AluI AGCT 2 cut(s) 303, 357
Alw21I GWGCWC 1 cut(s) 773
Alw26I GTCTC 1 cut(s) 639
AlwI GGATC 2 cut(s) 272, 695
AoxI GGCC 5 cut(s) 329, 365, 452, 558, 691
ApaI GGGCCC 1 cut(s) 456
ApeKI GCWGC 2 cut(s) 542, 650
ApoI RAATTY 2 cut(s) 370, 1091
AspLEI GCGC 2 cut(s) 143, 830
AspS9I GGNCC 6 cut(s) 365, 410, 452, 453, 559, 968
AsuC2I CCSGG 2 cut(s) 51, 975
AsuHPI GGTGA 3 cut(s) 260, 307, 1039
AsuII TTCGAA 1 cut(s) 668
AvaII GGWCC 2 cut(s) 410, 968
BaeGI GKGCMC 2 cut(s) 456, 682
BalI TGGCCA 1 cut(s) 693
BanII GRGCYC 3 cut(s) 456, 578, 1139
BarI GAAGNNNNNNTAC 2 cut(s) 1022, 1054
BauI CACGAG 1 cut(s) 360
BbrPI CACGTG 1 cut(s) 116
BbsI GAAGAC 1 cut(s) 989
Bbv12I GWGCWC 1 cut(s) 773
BbvI GCAGC 2 cut(s) 554, 637
BccI CCATC 3 cut(s) 429, 570, 794
BceAI ACGGC 4 cut(s) 43, 306, 316, 698
BciT130I CCWGG 3 cut(s) 414, 723, 849
BcnI CCSGG 2 cut(s) 51, 975
BcoDI GTCTC 1 cut(s) 639
BfaI CTAG 1 cut(s) 477
BfmI CTRYAG 3 cut(s) 606, 936, 1020
BfuAI ACCTGC 1 cut(s) 929
BglI GCCNNNNNGGC 1 cut(s) 460
BglII AGATCT 1 cut(s) 387
BisI GCNGC 8 cut(s) 144, 180, 329, 348, 543, 558, 651, 1069
BlsI GCNGC 8 cut(s) 145, 181, 330, 349, 544, 559, 652, 1070
BmcAI AGTACT 1 cut(s) 839
Bme1390I CCNGG 5 cut(s) 51, 414, 723, 849, 975
Bme18I GGWCC 2 cut(s) 410, 968
BmgT120I GGNCC 6 cut(s) 365, 410, 452, 453, 559, 968
BmiI GGNNCC 3 cut(s) 31, 454, 575
BmrFI CCNGG 5 cut(s) 51, 414, 723, 849, 975
BmrI ACTGGG 2 cut(s) 468, 1133
BmsI GCATC 1 cut(s) 637
BmuI ACTGGG 2 cut(s) 468, 1133
BpiI GAAGAC 1 cut(s) 989
BpmI CTGGAG 1 cut(s) 16
Bpu14I TTCGAA 1 cut(s) 668
BpuEI CTTGAG 1 cut(s) 985
BpuMI CCSGG 2 cut(s) 51, 975
Bsa29I ATCGAT 1 cut(s) 789
BsaAI YACGTR 2 cut(s) 77, 116
BsaBI GATNNNNATC 1 cut(s) 282
BsaJI CCNNGG 4 cut(s) 144, 413, 674, 1062
BsaWI WCCGGW 1 cut(s) 64
BsaXI ACNNNNNCTCC 4 cut(s) 565, 595, 619, 649
Bsc4I CCNNNNNNNGG 1 cut(s) 150
Bse118I RCCGGY 3 cut(s) 220, 337, 653
Bse1I ACTGG 2 cut(s) 463, 1139
Bse3DI GCAATG 2 cut(s) 545, 804
Bse8I GATNNNNATC 1 cut(s) 282
BseBI CCWGG 3 cut(s) 414, 723, 849
BseCI ATCGAT 1 cut(s) 789
BseDI CCNNGG 4 cut(s) 144, 413, 674, 1062
BseGI GGATG 3 cut(s) 165, 440, 562
BseJI GATNNNNATC 1 cut(s) 282
BseLI CCNNNNNNNGG 1 cut(s) 150
BseMI GCAATG 2 cut(s) 545, 804
BseMII CTCAG 1 cut(s) 888
BseNI ACTGG 2 cut(s) 463, 1139
BseRI GAGGAG 1 cut(s) 627
BseSI GKGCMC 2 cut(s) 456, 682
BseX3I CGGCCG 1 cut(s) 329
BseXI GCAGC 2 cut(s) 554, 637
Bsh1236I CGCG 3 cut(s) 141, 146, 182
Bsh1285I CGRYCG 1 cut(s) 332
BshFI GGCC 5 cut(s) 331, 367, 454, 560, 693
BshVI ATCGAT 1 cut(s) 789
BsiEI CGRYCG 1 cut(s) 332
BsiHKAI GWGCWC 1 cut(s) 773
BsiSI CCGG 6 cut(s) 51, 65, 221, 338, 654, 975
BslFI GGGAC 2 cut(s) 325, 946
BslI CCNNNNNNNGG 1 cut(s) 150
BsmAI GTCTC 1 cut(s) 639
BsmFI GGGAC 2 cut(s) 325, 946
BsnI GGCC 5 cut(s) 331, 367, 454, 560, 693
Bsp119I TTCGAA 1 cut(s) 668
Bsp120I GGGCCC 1 cut(s) 452
Bsp1286I GDGCHC 5 cut(s) 456, 578, 682, 773, 1139
Bsp143I GATC 5 cut(s) 277, 387, 700, 790, 1101
BspANI GGCC 5 cut(s) 331, 367, 454, 560, 693
BspCNI CTCAG 1 cut(s) 887
BspDI ATCGAT 1 cut(s) 789
BspFNI CGCG 3 cut(s) 141, 146, 182
BspHI TCATGA 1 cut(s) 600
BspLI GGNNCC 3 cut(s) 31, 454, 575
BspMAI CTGCAG 1 cut(s) 940
BspMI ACCTGC 1 cut(s) 929
BspPI GGATC 2 cut(s) 272, 695
BspT104I TTCGAA 1 cut(s) 668
BsrBI CCGCTC 3 cut(s) 186, 596, 966
BsrDI GCAATG 2 cut(s) 545, 804
BsrFI RCCGGY 3 cut(s) 220, 337, 653
BsrI ACTGG 2 cut(s) 463, 1139
BssAI RCCGGY 3 cut(s) 220, 337, 653
BssECI CCNNGG 4 cut(s) 144, 413, 674, 1062
BssMI GATC 5 cut(s) 277, 387, 700, 790, 1101
BssNAI GTATAC 1 cut(s) 733
BssSI CACGAG 1 cut(s) 360
BssT1I CCWWGG 1 cut(s) 1062
Bst1107I GTATAC 1 cut(s) 733
Bst2BI CACGAG 1 cut(s) 360
Bst2UI CCWGG 3 cut(s) 414, 723, 849
Bst4CI ACNGT 6 cut(s) 209, 273, 316, 911, 1021, 1045
Bst6I CTCTTC 1 cut(s) 476
BstAPI GCANNNNNTGC 1 cut(s) 42
BstBAI YACGTR 2 cut(s) 77, 116
BstBI TTCGAA 1 cut(s) 668
BstC8I GCNNGC 5 cut(s) 47, 184, 465, 540, 773
BstDEI CTNAG 2 cut(s) 810, 874
BstDSI CCRYGG 2 cut(s) 144, 674
BstF5I GGATG 3 cut(s) 165, 440, 562
BstFNI CGCG 3 cut(s) 141, 146, 182
BstHHI GCGC 2 cut(s) 143, 830
BstKTI GATC 5 cut(s) 280, 390, 703, 793, 1104
BstMAI GTCTC 1 cut(s) 639
BstMBI GATC 5 cut(s) 277, 387, 700, 790, 1101
BstMCI CGRYCG 1 cut(s) 332
BstMWI GCNNNNNNNGC 6 cut(s) 42, 55, 176, 325, 334, 460
BstNI CCWGG 3 cut(s) 414, 723, 849
BstNSI RCATGY 1 cut(s) 828
BstSCI CCNGG 5 cut(s) 49, 412, 721, 847, 973
BstSFI CTRYAG 3 cut(s) 606, 936, 1020
BstSLI GKGCMC 2 cut(s) 456, 682
BstUI CGCG 3 cut(s) 141, 146, 182
BstV1I GCAGC 2 cut(s) 554, 637
BstV2I GAAGAC 1 cut(s) 989
BstX2I RGATCY 2 cut(s) 277, 387
BstYI RGATCY 2 cut(s) 277, 387
BstZ17I GTATAC 1 cut(s) 733
BstZI CGGCCG 1 cut(s) 329
Bsu15I ATCGAT 1 cut(s) 789
BsuRI GGCC 5 cut(s) 331, 367, 454, 560, 693
BsuTUI ATCGAT 1 cut(s) 789
BtgI CCRYGG 2 cut(s) 144, 674
BtgZI GCGATG 1 cut(s) 762
BtsCI GGATG 3 cut(s) 165, 440, 562
BtsIMutI CAGTG 1 cut(s) 456
BveI ACCTGC 1 cut(s) 929
Cac8I GCNNGC 5 cut(s) 47, 184, 465, 540, 773
CciI TCATGA 1 cut(s) 600
CfoI GCGC 2 cut(s) 143, 830
Cfr10I RCCGGY 3 cut(s) 220, 337, 653
Cfr13I GGNCC 6 cut(s) 365, 410, 452, 453, 559, 968
Cfr42I CCGCGG 1 cut(s) 147
ClaI ATCGAT 1 cut(s) 789
Csp6I GTAC 6 cut(s) 74, 137, 507, 613, 838, 1039
CspCI CAANNNNNGTGG 2 cut(s) 445, 480
CviQI GTAC 6 cut(s) 74, 137, 507, 613, 838, 1039
DdeI CTNAG 2 cut(s) 810, 874
DpnI GATC 5 cut(s) 279, 389, 702, 792, 1103
DpnII GATC 5 cut(s) 277, 387, 700, 790, 1101
EaeI YGGCCR 2 cut(s) 329, 691
EagI CGGCCG 1 cut(s) 329
Eam1104I CTCTTC 1 cut(s) 476
EarI CTCTTC 1 cut(s) 476
EciI GGCGGA 1 cut(s) 218
EclXI CGGCCG 1 cut(s) 329
Eco130I CCWWGG 1 cut(s) 1062
Eco24I GRGCYC 3 cut(s) 456, 578, 1139
Eco47I GGWCC 2 cut(s) 410, 968
Eco52I CGGCCG 1 cut(s) 329
Eco72I CACGTG 1 cut(s) 116
EcoRII CCWGG 3 cut(s) 412, 721, 847
EcoT14I CCWWGG 1 cut(s) 1062
EcoT38I GRGCYC 3 cut(s) 456, 578, 1139
ErhI CCWWGG 1 cut(s) 1062
FaqI GGGAC 2 cut(s) 325, 946
FauI CCCGC 1 cut(s) 139
FblI GTMKAC 1 cut(s) 732
Fnu4HI GCNGC 8 cut(s) 144, 180, 329, 348, 543, 558, 651, 1069
FokI GGATG 3 cut(s) 172, 447, 549
FriOI GRGCYC 3 cut(s) 456, 578, 1139
Fsp4HI GCNGC 8 cut(s) 144, 180, 329, 348, 543, 558, 651, 1069
FspBI CTAG 1 cut(s) 477
FspI TGCGCA 1 cut(s) 829
GlaI GCGC 2 cut(s) 142, 829
GluI GCNGC 8 cut(s) 144, 180, 329, 348, 543, 558, 651, 1069
GsuI CTGGAG 1 cut(s) 16
HaeIII GGCC 5 cut(s) 331, 367, 454, 560, 693
HapII CCGG 6 cut(s) 51, 65, 221, 338, 654, 975
HhaI GCGC 2 cut(s) 143, 830
Hin6I GCGC 2 cut(s) 141, 828
HinP1I GCGC 2 cut(s) 141, 828
HincII GTYRAC 2 cut(s) 109, 421
HindII GTYRAC 2 cut(s) 109, 421
HinfI GANTC 5 cut(s) 68, 283, 473, 484, 670
HpaI GTTAAC 2 cut(s) 109, 421
HpaII CCGG 6 cut(s) 51, 65, 221, 338, 654, 975
HphI GGTGA 3 cut(s) 260, 307, 1039
Hpy166II GTNNAC 5 cut(s) 109, 421, 615, 733, 1041
Hpy188I TCNGA 5 cut(s) 277, 282, 288, 442, 1090
Hpy188III TCNNGA 3 cut(s) 391, 601, 914
Hpy8I GTNNAC 5 cut(s) 109, 421, 615, 733, 1041
Hpy99I CGWCG 2 cut(s) 292, 337
HpyAV CCTTC 2 cut(s) 235, 876
HpyCH4III ACNGT 6 cut(s) 209, 273, 316, 911, 1021, 1045
HpyCH4IV ACGT 3 cut(s) 76, 115, 819
HpyCH4V TGCA 7 cut(s) 269, 542, 584, 761, 938, 1016, 1151
HpyF10VI GCNNNNNNNGC 6 cut(s) 42, 55, 176, 325, 334, 460
HpyF3I CTNAG 2 cut(s) 810, 874
HpySE526I ACGT 3 cut(s) 76, 115, 819
HspAI GCGC 2 cut(s) 141, 828
KspAI GTTAAC 2 cut(s) 109, 421
KspI CCGCGG 1 cut(s) 147
Kzo9I GATC 5 cut(s) 277, 387, 700, 790, 1101
LmnI GCTCC 3 cut(s) 35, 63, 573
Lsp1109I GCAGC 2 cut(s) 554, 637
LweI GCATC 1 cut(s) 637
MaeI CTAG 1 cut(s) 477
MaeII ACGT 3 cut(s) 76, 115, 819
MaeIII GTNAC 7 cut(s) 209, 216, 248, 376, 715, 820, 1045
MalI GATC 5 cut(s) 279, 389, 702, 792, 1103
MbiI CCGCTC 3 cut(s) 186, 596, 966
MboI GATC 5 cut(s) 277, 387, 700, 790, 1101
MboII GAAGA 4 cut(s) 493, 994, 1042, 1045
MfeI CAATTG 1 cut(s) 568
MflI RGATCY 2 cut(s) 277, 387
MhlI GDGCHC 5 cut(s) 456, 578, 682, 773, 1139
MlsI TGGCCA 1 cut(s) 693
MluCI AATT 5 cut(s) 90, 370, 568, 917, 1091
MluNI TGGCCA 1 cut(s) 693
MlyI GAGTC 3 cut(s) 77, 467, 493
MmeI TCCRAC 2 cut(s) 85, 311
MnlI CCTC 9 cut(s) 184, 231, 436, 463, 648, 715, 888, 1009, 1136
Mox20I TGGCCA 1 cut(s) 693
MscI TGGCCA 1 cut(s) 693
MseI TTAA 5 cut(s) 5, 108, 420, 993, 1131
MslI CAYNNNNRTG 3 cut(s) 531, 766, 1052
Msp20I TGGCCA 1 cut(s) 693
MspA1I CMGCKG 1 cut(s) 146
MspI CCGG 6 cut(s) 51, 65, 221, 338, 654, 975
MspR9I CCNGG 5 cut(s) 51, 414, 723, 849, 975
MunI CAATTG 1 cut(s) 568
MvaI CCWGG 3 cut(s) 414, 723, 849
MvnI CGCG 3 cut(s) 141, 146, 182
MwoI GCNNNNNNNGC 6 cut(s) 42, 55, 176, 325, 334, 460
NciI CCSGG 2 cut(s) 51, 975
NdeII GATC 5 cut(s) 277, 387, 700, 790, 1101
NlaIV GGNNCC 3 cut(s) 31, 454, 575
NmuCI GTSAC 4 cut(s) 209, 248, 715, 1045
NsbI TGCGCA 1 cut(s) 829
NspI RCATGY 1 cut(s) 828
NspV TTCGAA 1 cut(s) 668
OliI CACNNNNGTG 2 cut(s) 531, 1052
PagI TCATGA 1 cut(s) 600
PfeI GAWTC 2 cut(s) 283, 670
PfoI TCCNGGA 1 cut(s) 847
PkrI GCNGC 8 cut(s) 145, 181, 330, 349, 544, 559, 652, 1070
PleI GAGTC 3 cut(s) 76, 467, 492
PmaCI CACGTG 1 cut(s) 116
PmlI CACGTG 1 cut(s) 116
PpsI GAGTC 3 cut(s) 76, 467, 492
Ppu21I YACGTR 2 cut(s) 77, 116
Psp1406I AACGTT 1 cut(s) 819
Psp6I CCWGG 3 cut(s) 412, 721, 847
PspCI CACGTG 1 cut(s) 116
PspGI CCWGG 3 cut(s) 412, 721, 847
PspN4I GGNNCC 3 cut(s) 31, 454, 575
PspOMI GGGCCC 1 cut(s) 452
PspPI GGNCC 6 cut(s) 365, 410, 452, 453, 559, 968
PstI CTGCAG 1 cut(s) 940
PsuI RGATCY 2 cut(s) 277, 387
RsaI GTAC 6 cut(s) 75, 138, 508, 614, 839, 1040
RsaNI GTAC 6 cut(s) 74, 137, 507, 613, 838, 1039
RseI CAYNNNNRTG 3 cut(s) 531, 766, 1052
SacII CCGCGG 1 cut(s) 147
SaqAI TTAA 5 cut(s) 5, 108, 420, 993, 1131
SatI GCNGC 8 cut(s) 144, 180, 329, 348, 543, 558, 651, 1069
Sau3AI GATC 5 cut(s) 277, 387, 700, 790, 1101
Sau96I GGNCC 6 cut(s) 365, 410, 452, 453, 559, 968
ScaI AGTACT 1 cut(s) 839
SchI GAGTC 3 cut(s) 77, 467, 493
ScrFI CCNGG 5 cut(s) 51, 414, 723, 849, 975
SduI GDGCHC 5 cut(s) 456, 578, 682, 773, 1139
SfaNI GCATC 1 cut(s) 637
SfcI CTRYAG 3 cut(s) 606, 936, 1020
Sfr303I CCGCGG 1 cut(s) 147
SfuI TTCGAA 1 cut(s) 668
SgrBI CCGCGG 1 cut(s) 147
SinI GGWCC 2 cut(s) 410, 968
SmiMI CAYNNNNRTG 3 cut(s) 531, 766, 1052
SmlI CTYRAG 1 cut(s) 1000
SmoI CTYRAG 1 cut(s) 1000
Sse9I AATT 5 cut(s) 90, 370, 568, 917, 1091
SspMI CTAG 1 cut(s) 477
StyD4I CCNGG 5 cut(s) 49, 412, 721, 847, 973
StyI CCWWGG 1 cut(s) 1062
TaaI ACNGT 6 cut(s) 209, 273, 316, 911, 1021, 1045
TaiI ACGT 3 cut(s) 79, 118, 822
TaqI TCGA 7 cut(s) 668, 699, 707, 743, 789, 913, 1100
TasI AATT 5 cut(s) 90, 370, 568, 917, 1091
TatI WGTACW 2 cut(s) 837, 1038
TauI GCSGC 6 cut(s) 146, 182, 331, 350, 560, 1071
TfiI GAWTC 2 cut(s) 283, 670
Tru1I TTAA 5 cut(s) 5, 108, 420, 993, 1131
Tru9I TTAA 5 cut(s) 5, 108, 420, 993, 1131
TscAI CASTG 1 cut(s) 463
TseFI GTSAC 4 cut(s) 209, 248, 715, 1045
TseI GCWGC 2 cut(s) 542, 650
Tsp45I GTSAC 4 cut(s) 209, 248, 715, 1045
TspDTI ATGAA 1 cut(s) 858
TspGWI ACGGA 2 cut(s) 632, 663
TspRI CASTG 1 cut(s) 463
VpaK11BI GGWCC 2 cut(s) 410, 968
XapI RAATTY 2 cut(s) 370, 1091
XceI RCATGY 1 cut(s) 828
XmiI GTMKAC 1 cut(s) 732
XspI CTAG 1 cut(s) 477
ZrmI AGTACT 1 cut(s) 839
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.