Rmu_ssc0000372.1_g000058

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000372.1
N/A
Physical Location & Seq
Forward (+)
204878 .. 205269
392 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 273 bp
atgatagaattggctaaaggcttggaaaacagtgggaagccttttgtctgggtcataagccccccggtgaagcacgacttgaagggcaagttccaatcgaaatggcttccggagcttttcgaggagcgaatgagggagacaaagcaagattgttggtggccgctggctgcaaagcaggcgtttaactcgaagttgttggcagatgagatgggtgtaagtatggagctgatgaggagtgtgaagagtaatgtggatgaggaggaggtgagatga
Functional Annotation

Protein Analysis

90

Amino Acids

10.48

Weight (kDa)

5.85

Isoelectric Point (pI)

49.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 109
AciI CCGC 1 cut(s) 161
AcoI YGGCCR 1 cut(s) 158
AgsI TTSAA 1 cut(s) 82
AluBI AGCT 2 cut(s) 115, 226
AluI AGCT 2 cut(s) 115, 226
Alw26I GTCTC 1 cut(s) 131
Aor13HI TCCGGA 1 cut(s) 109
AoxI GGCC 1 cut(s) 158
ApeKI GCWGC 1 cut(s) 167
AsuC2I CCSGG 1 cut(s) 65
AsuHPI GGTGA 1 cut(s) 79
BbvI GCAGC 1 cut(s) 154
BccI CCATC 1 cut(s) 202
BcnI CCSGG 1 cut(s) 65
BcoDI GTCTC 1 cut(s) 131
BisI GCNGC 2 cut(s) 161, 168
BlsI GCNGC 2 cut(s) 162, 169
Bme1390I CCNGG 1 cut(s) 65
BmrFI CCNGG 1 cut(s) 65
BpuMI CCSGG 1 cut(s) 65
BsaJI CCNNGG 1 cut(s) 63
BsaWI WCCGGW 1 cut(s) 109
BseAI TCCGGA 1 cut(s) 109
BseDI CCNNGG 1 cut(s) 63
BseGI GGATG 1 cut(s) 259
BseRI GAGGAG 3 cut(s) 137, 247, 272
BseXI GCAGC 1 cut(s) 154
BshFI GGCC 1 cut(s) 160
BsiSI CCGG 2 cut(s) 65, 110
BsmAI GTCTC 1 cut(s) 131
BsnI GGCC 1 cut(s) 160
Bsp13I TCCGGA 1 cut(s) 109
BspACI CCGC 1 cut(s) 161
BspANI GGCC 1 cut(s) 160
BspEI TCCGGA 1 cut(s) 109
BssECI CCNNGG 1 cut(s) 63
Bst4CI ACNGT 1 cut(s) 32
Bst6I CTCTTC 1 cut(s) 236
BstC8I GCNNGC 2 cut(s) 165, 177
BstF5I GGATG 1 cut(s) 259
BstMAI GTCTC 1 cut(s) 131
BstMWI GCNNNNNNNGC 2 cut(s) 112, 176
BstSCI CCNGG 1 cut(s) 63
BstV1I GCAGC 1 cut(s) 154
BsuRI GGCC 1 cut(s) 160
BtsCI GGATG 1 cut(s) 259
BtsIMutI CAGTG 1 cut(s) 37
Cac8I GCNNGC 2 cut(s) 165, 177
CviJI RGCY 9 cut(s) 14, 21, 40, 60, 106, 115, 160, 167, 226
CviKI_1 RGCY 9 cut(s) 14, 21, 40, 60, 106, 115, 160, 167, 226
EaeI YGGCCR 1 cut(s) 158
Eam1104I CTCTTC 1 cut(s) 236
EarI CTCTTC 1 cut(s) 236
FaiI YATR 2 cut(s) 56, 221
FalI AAGNNNNNCTT 2 cut(s) 62, 94
Fnu4HI GCNGC 2 cut(s) 161, 168
FokI GGATG 1 cut(s) 266
Fsp4HI GCNGC 2 cut(s) 161, 168
GluI GCNGC 2 cut(s) 161, 168
HaeIII GGCC 1 cut(s) 160
HapII CCGG 2 cut(s) 65, 110
HpaII CCGG 2 cut(s) 65, 110
HphI GGTGA 1 cut(s) 79
Hpy188III TCNNGA 1 cut(s) 110
HpyAV CCTTC 1 cut(s) 76
HpyCH4III ACNGT 1 cut(s) 32
HpyCH4V TGCA 1 cut(s) 170
HpyF10VI GCNNNNNNNGC 2 cut(s) 112, 176
Kpn2I TCCGGA 1 cut(s) 109
LmnI GCTCC 3 cut(s) 112, 124, 223
LpnPI CCDG 5 cut(s) 34, 78, 123, 149, 161
Lsp1109I GCAGC 1 cut(s) 154
MboII GAAGA 1 cut(s) 253
MluCI AATT 1 cut(s) 8
MnlI CCTC 6 cut(s) 115, 126, 225, 250, 253, 256
MroI TCCGGA 1 cut(s) 109
MseI TTAA 1 cut(s) 183
MspA1I CMGCKG 1 cut(s) 163
MspI CCGG 2 cut(s) 65, 110
MspR9I CCNGG 1 cut(s) 65
MwoI GCNNNNNNNGC 2 cut(s) 112, 176
NciI CCSGG 1 cut(s) 65
PkrI GCNGC 2 cut(s) 162, 169
SaqAI TTAA 1 cut(s) 183
SatI GCNGC 2 cut(s) 161, 168
ScrFI CCNGG 1 cut(s) 65
SetI ASST 3 cut(s) 117, 228, 267
Sse9I AATT 1 cut(s) 8
SsiI CCGC 1 cut(s) 161
StyD4I CCNGG 1 cut(s) 63
TaaI ACNGT 1 cut(s) 32
TaqI TCGA 3 cut(s) 98, 120, 188
TasI AATT 1 cut(s) 8
TauI GCSGC 1 cut(s) 163
Tru1I TTAA 1 cut(s) 183
Tru9I TTAA 1 cut(s) 183
TscAI CASTG 1 cut(s) 37
TseI GCWGC 1 cut(s) 167
TspRI CASTG 1 cut(s) 37
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.