Rmu_ssc0000432.1_g000027

Converts proline to delta-1-pyrroline-5-carboxylate

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000432.1
N/A
Physical Location & Seq
Reverse (-)
112943 .. 118905
5963 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1140 bp
atggatgtcactactttaaccaattatttccaaactactttcggaatagtagcagaggagaagaagctttctgtcagtgggcgtaactggggagaagttgatttaagcgataatatgctgtctttcttggttgactccaagcaaggatttgaggtatctttggctgatgtctcacaaacacagcttcaggggaaaaacgacgtcaccttagagttccatgtggatgacaccactggagcaaacgagaaagattctttgatggaaagactcctgaagacgctccgccctctcaactcggcttcctccaccaccatctccggcgtttcgccgatcaccttccctgaaaaggcccaacccgaagcggaggaggagctgctgctgccgcccctggacggccaccaccccaaagcagcggaggccttgttcaacctcgacgacgagaacaacaggctgtttgcgtcggttcctacgttgaagctgctccgcgcggcggcgaatctccacatggtggcgatggagccgatggtggacgtgggaatgtggatgatgaggtcgaggctgatgacgacgcccggggtcaaagacgtcattttggggttcataaggtccacgttttacgagcacttttgcgccggtgaggacaccgtggcgaccggtgagtcggttcgcgcgctcaacgaggcggggcttaggggcatgctggtctacgccttagagtacgccagcgacaacgagtcatgtgatcggaacttgcagggcttcttggacaccgttgaatccaccaagtcccttcctcgtgagctttattatactgaagattactgcaatatgccccatgaagcttctccagcggaatctgggaaactggctgtgaaaaaagcacatgaaattgggatcagcaaggtgcaccagaagctcgaatttgctcagctgtatggaatggcagaagcactttcctttggtctgaaagacgcagggtttcaagtcagcaagtatatgccatttggacctatagaattagtgatgccttaccttttacggagggctgaagaaaaccgagggcttttatctgcttcaactctagacagaaaccttaccagggaggagttgaaaaggagactcaaagcagcaattttctaa

Protein Analysis

379

Amino Acids

42.18

Weight (kDa)

5.05

Isoelectric Point (pI)

39.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SSrecog PF03531 27 - 88 2.4e-20 Structure-specific recognition protein (SSRP1)
Pro_dh PF01619 284 - 355 1.5e-19 Proline dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 658
AatII GACGTC 2 cut(s) 204, 588
AccB7I CCANNNNNTGG 1 cut(s) 508
AccI GTMKAC 1 cut(s) 705
AccII CGCG 4 cut(s) 486, 488, 669, 671
AciI CCGC 9 cut(s) 283, 362, 383, 413, 484, 488, 491, 683, 851
AclWI GGATC 1 cut(s) 902
AcoI YGGCCR 1 cut(s) 394
AcsI RAATTY 1 cut(s) 920
AcuI CTGAAG 4 cut(s) 170, 293, 834, 1068
AcyI GRCGYC 3 cut(s) 201, 569, 585
AdeI CACNNNGTG 1 cut(s) 508
AfaI GTAC 1 cut(s) 719
AfiI CCNNNNNNNGG 5 cut(s) 346, 392, 490, 508, 1099
AgeI ACCGGT 1 cut(s) 653
AgsI TTSAA 6 cut(s) 427, 475, 776, 983, 1077, 1111
AhdI GACNNNNNGTC 1 cut(s) 733
AjiI CACGTC 1 cut(s) 532
AjnI CCWGG 2 cut(s) 387, 1097
AloI GAACNNNNNNTCC 2 cut(s) 407, 439
AluBI AGCT 8 cut(s) 67, 184, 373, 478, 802, 842, 916, 931
AluI AGCT 8 cut(s) 67, 184, 373, 478, 802, 842, 916, 931
Alw21I GWGCWC 2 cut(s) 624, 909
Alw26I GTCTC 2 cut(s) 175, 1111
Alw44I GTGCAC 1 cut(s) 905
AlwI GGATC 1 cut(s) 902
Ama87I CYCGRG 1 cut(s) 572
AoxI GGCC 3 cut(s) 348, 394, 417
ApaLI GTGCAC 1 cut(s) 905
ApeKI GCWGC 6 cut(s) 373, 376, 379, 410, 478, 1127
ApoI RAATTY 1 cut(s) 920
AsiGI ACCGGT 1 cut(s) 653
AspLEI GCGC 4 cut(s) 488, 632, 671, 673
AspS9I GGNCC 3 cut(s) 349, 606, 1007
AsuC2I CCSGG 2 cut(s) 573, 574
AsuHPI GGTGA 4 cut(s) 196, 325, 647, 668
AvaI CYCGRG 1 cut(s) 572
AvaII GGWCC 2 cut(s) 606, 1007
BaeGI GKGCMC 1 cut(s) 909
BauI CACGAG 1 cut(s) 795
BbsI GAAGAC 1 cut(s) 281
Bbv12I GWGCWC 2 cut(s) 624, 909
BbvI GCAGC 5 cut(s) 360, 363, 366, 422, 465
BccI CCATC 4 cut(s) 253, 320, 508, 517
BceAI ACGGC 1 cut(s) 409
BciT130I CCWGG 2 cut(s) 389, 1099
BcnI CCSGG 2 cut(s) 573, 574
BcoDI GTCTC 2 cut(s) 175, 1111
BfaI CTAG 1 cut(s) 1082
BfmI CTRYAG 1 cut(s) 1011
BisI GCNGC 9 cut(s) 374, 377, 380, 383, 411, 479, 489, 492, 1128
BlpI GCTNAGC 1 cut(s) 927
BlsI GCNGC 9 cut(s) 375, 378, 381, 384, 412, 480, 490, 493, 1129
Bme1390I CCNGG 4 cut(s) 389, 573, 574, 1099
Bme18I GGWCC 2 cut(s) 606, 1007
BmeRI GACNNNNNGTC 1 cut(s) 733
BmeT110I CYCGRG 1 cut(s) 572
BmgBI CACGTC 1 cut(s) 532
BmgT120I GGNCC 3 cut(s) 349, 606, 1007
BmiI GGNNCC 2 cut(s) 465, 519
BmrFI CCNGG 4 cut(s) 389, 573, 574, 1099
BmrI ACTGGG 1 cut(s) 97
BmsI GCATC 1 cut(s) 1014
BmuI ACTGGG 1 cut(s) 97
BpiI GAAGAC 1 cut(s) 281
BpmI CTGGAG 2 cut(s) 255, 831
Bpu10I CCTNAGC 1 cut(s) 689
Bpu1102I GCTNAGC 1 cut(s) 927
BpuMI CCSGG 2 cut(s) 573, 574
BsaHI GRCGYC 3 cut(s) 201, 569, 585
BsaJI CCNNGG 6 cut(s) 387, 572, 573, 645, 1057, 1098
BsaWI WCCGGW 1 cut(s) 653
BsaXI ACNNNNNCTCC 2 cut(s) 407, 437
Bsc4I CCNNNNNNNGG 5 cut(s) 346, 392, 490, 508, 1099
Bse118I RCCGGY 2 cut(s) 632, 653
Bse1I ACTGG 3 cut(s) 92, 238, 870
BseBI CCWGG 2 cut(s) 389, 1099
BseDI CCNNGG 6 cut(s) 387, 572, 573, 645, 1057, 1098
BseGI GGATG 3 cut(s) 10, 229, 549
BseLI CCNNNNNNNGG 5 cut(s) 346, 392, 490, 508, 1099
BseMII CTCAG 1 cut(s) 941
BseNI ACTGG 3 cut(s) 92, 238, 870
BsePI GCGCGC 1 cut(s) 669
BseRI GAGGAG 4 cut(s) 71, 380, 383, 1118
BseSI GKGCMC 1 cut(s) 909
BseXI GCAGC 5 cut(s) 360, 363, 366, 422, 465
Bsh1236I CGCG 4 cut(s) 486, 488, 669, 671
Bsh1285I CGRYCG 1 cut(s) 654
BshFI GGCC 3 cut(s) 350, 396, 419
BshTI ACCGGT 1 cut(s) 653
BsiEI CGRYCG 1 cut(s) 654
BsiHKAI GWGCWC 2 cut(s) 624, 909
BsiHKCI CYCGRG 1 cut(s) 572
BsiSI CCGG 4 cut(s) 318, 573, 633, 654
BslFI GGGAC 1 cut(s) 772
BslI CCNNNNNNNGG 5 cut(s) 346, 392, 490, 508, 1099
BsmAI GTCTC 2 cut(s) 175, 1111
BsmFI GGGAC 1 cut(s) 772
BsnI GGCC 3 cut(s) 350, 396, 419
BsoBI CYCGRG 1 cut(s) 572
Bsp1286I GDGCHC 2 cut(s) 624, 909
Bsp143I GATC 3 cut(s) 330, 742, 894
Bsp1720I GCTNAGC 1 cut(s) 927
BspACI CCGC 9 cut(s) 283, 362, 383, 413, 484, 488, 491, 683, 851
BspANI GGCC 3 cut(s) 350, 396, 419
BspCNI CTCAG 1 cut(s) 940
BspFNI CGCG 4 cut(s) 486, 488, 669, 671
BspLI GGNNCC 2 cut(s) 465, 519
BspPI GGATC 1 cut(s) 902
BsrFI RCCGGY 2 cut(s) 632, 653
BsrI ACTGG 3 cut(s) 92, 238, 870
BssAI RCCGGY 2 cut(s) 632, 653
BssECI CCNNGG 6 cut(s) 387, 572, 573, 645, 1057, 1098
BssHII GCGCGC 1 cut(s) 669
BssMI GATC 3 cut(s) 330, 742, 894
BssNI GRCGYC 3 cut(s) 201, 569, 585
BssSI CACGAG 1 cut(s) 795
Bst2BI CACGAG 1 cut(s) 795
Bst2UI CCWGG 2 cut(s) 389, 1099
Bst4CI ACNGT 2 cut(s) 646, 772
BstACI GRCGYC 3 cut(s) 201, 569, 585
BstC8I GCNNGC 3 cut(s) 671, 698, 724
BstDEI CTNAG 4 cut(s) 208, 689, 712, 927
BstDSI CCRYGG 1 cut(s) 645
BstF5I GGATG 3 cut(s) 10, 229, 549
BstFNI CGCG 4 cut(s) 486, 488, 669, 671
BstHHI GCGC 4 cut(s) 488, 632, 671, 673
BstKTI GATC 3 cut(s) 333, 745, 897
BstMAI GTCTC 2 cut(s) 175, 1111
BstMBI GATC 3 cut(s) 330, 742, 894
BstMCI CGRYCG 1 cut(s) 654
BstMWI GCNNNNNNNGC 5 cut(s) 379, 382, 416, 848, 913
BstNI CCWGG 2 cut(s) 389, 1099
BstNSI RCATGY 1 cut(s) 700
BstSCI CCNGG 4 cut(s) 387, 571, 572, 1097
BstSFI CTRYAG 1 cut(s) 1011
BstSLI GKGCMC 1 cut(s) 909
BstUI CGCG 4 cut(s) 486, 488, 669, 671
BstV1I GCAGC 5 cut(s) 360, 363, 366, 422, 465
BstV2I GAAGAC 1 cut(s) 281
BsuRI GGCC 3 cut(s) 350, 396, 419
BtgI CCRYGG 1 cut(s) 645
BtgZI GCGATG 1 cut(s) 527
BtrI CACGTC 1 cut(s) 532
BtsCI GGATG 3 cut(s) 10, 229, 549
BtsIMutI CAGTG 2 cut(s) 82, 231
Cac8I GCNNGC 3 cut(s) 671, 698, 724
CfoI GCGC 4 cut(s) 488, 632, 671, 673
Cfr10I RCCGGY 2 cut(s) 632, 653
Cfr13I GGNCC 3 cut(s) 349, 606, 1007
Cfr9I CCCGGG 1 cut(s) 572
CseI GACGC 4 cut(s) 286, 447, 577, 980
Csp6I GTAC 1 cut(s) 718
CspAI ACCGGT 1 cut(s) 653
CviAII CATG 6 cut(s) 218, 505, 697, 738, 836, 884
CviQI GTAC 1 cut(s) 718
DdeI CTNAG 4 cut(s) 208, 689, 712, 927
DpnI GATC 3 cut(s) 332, 744, 896
DpnII GATC 3 cut(s) 330, 742, 894
DraIII CACNNNGTG 1 cut(s) 508
DrdI GACNNNNNNGTC 1 cut(s) 658
DriI GACNNNNNGTC 1 cut(s) 733
DseDI GACNNNNNNGTC 1 cut(s) 658
EaeI YGGCCR 1 cut(s) 394
Eam1105I GACNNNNNGTC 1 cut(s) 733
EciI GGCGGA 1 cut(s) 272
Eco147I AGGCCT 1 cut(s) 419
Eco47I GGWCC 2 cut(s) 606, 1007
Eco57I CTGAAG 4 cut(s) 170, 293, 834, 1068
Eco88I CYCGRG 1 cut(s) 572
EcoRII CCWGG 2 cut(s) 387, 1097
FaeI CATG 6 cut(s) 221, 508, 700, 741, 839, 887
FaqI GGGAC 1 cut(s) 772
FatI CATG 6 cut(s) 217, 504, 696, 737, 835, 883
FauI CCCGC 1 cut(s) 676
FblI GTMKAC 1 cut(s) 705
Fnu4HI GCNGC 9 cut(s) 374, 377, 380, 383, 411, 479, 489, 492, 1128
FokI GGATG 3 cut(s) 17, 236, 556
Fsp4HI GCNGC 9 cut(s) 374, 377, 380, 383, 411, 479, 489, 492, 1128
FspBI CTAG 1 cut(s) 1082
GlaI GCGC 4 cut(s) 487, 631, 670, 672
GluI GCNGC 9 cut(s) 374, 377, 380, 383, 411, 479, 489, 492, 1128
GsuI CTGGAG 2 cut(s) 255, 831
HaeIII GGCC 3 cut(s) 350, 396, 419
HapII CCGG 4 cut(s) 318, 573, 633, 654
HgaI GACGC 4 cut(s) 286, 447, 577, 980
HhaI GCGC 4 cut(s) 488, 632, 671, 673
Hin1I GRCGYC 3 cut(s) 201, 569, 585
Hin1II CATG 6 cut(s) 221, 508, 700, 741, 839, 887
Hin6I GCGC 4 cut(s) 486, 630, 669, 671
HinP1I GCGC 4 cut(s) 486, 630, 669, 671
HincII GTYRAC 1 cut(s) 133
HindII GTYRAC 1 cut(s) 133
HindIII AAGCTT 2 cut(s) 65, 840
HinfI GANTC 9 cut(s) 134, 251, 267, 496, 659, 734, 776, 854, 1119
HpaII CCGG 4 cut(s) 318, 573, 633, 654
HphI GGTGA 4 cut(s) 196, 325, 647, 668
Hpy166II GTNNAC 5 cut(s) 133, 529, 609, 706, 907
Hpy188I TCNGA 3 cut(s) 44, 747, 966
Hpy188III TCNNGA 3 cut(s) 271, 797, 1082
Hpy8I GTNNAC 5 cut(s) 133, 529, 609, 706, 907
Hpy99I CGWCG 5 cut(s) 203, 437, 440, 463, 571
HpyAV CCTTC 2 cut(s) 346, 800
HpyCH4III ACNGT 2 cut(s) 646, 772
HpyCH4IV ACGT 5 cut(s) 201, 470, 531, 585, 611
HpyCH4V TGCA 3 cut(s) 754, 825, 907
HpyF10VI GCNNNNNNNGC 5 cut(s) 379, 382, 416, 848, 913
HpyF3I CTNAG 4 cut(s) 208, 689, 712, 927
HpySE526I ACGT 5 cut(s) 201, 470, 531, 585, 611
Hsp92I GRCGYC 3 cut(s) 201, 569, 585
Hsp92II CATG 6 cut(s) 221, 508, 700, 741, 839, 887
HspAI GCGC 4 cut(s) 486, 630, 669, 671
Kzo9I GATC 3 cut(s) 330, 742, 894
LmnI GCTCC 5 cut(s) 236, 285, 370, 486, 517
Lsp1109I GCAGC 5 cut(s) 360, 363, 366, 422, 465
LweI GCATC 1 cut(s) 1014
MaeI CTAG 1 cut(s) 1082
MaeII ACGT 5 cut(s) 201, 470, 531, 585, 611
MaeIII GTNAC 3 cut(s) 7, 83, 202
MalI GATC 3 cut(s) 332, 744, 896
MboI GATC 3 cut(s) 330, 742, 894
MboII GAAGA 4 cut(s) 73, 286, 827, 1061
MhlI GDGCHC 2 cut(s) 624, 909
MluCI AATT 5 cut(s) 22, 888, 920, 1016, 1131
MlyI GAGTC 5 cut(s) 128, 261, 668, 743, 1113
MseI TTAA 2 cut(s) 17, 104
MslI CAYNNNNRTG 1 cut(s) 222
MspA1I CMGCKG 3 cut(s) 413, 851, 931
MspI CCGG 4 cut(s) 318, 573, 633, 654
MspR9I CCNGG 4 cut(s) 389, 573, 574, 1099
MvaI CCWGG 2 cut(s) 389, 1099
MvnI CGCG 4 cut(s) 486, 488, 669, 671
MwoI GCNNNNNNNGC 5 cut(s) 379, 382, 416, 848, 913
NciI CCSGG 2 cut(s) 573, 574
NdeII GATC 3 cut(s) 330, 742, 894
NlaIII CATG 6 cut(s) 221, 508, 700, 741, 839, 887
NlaIV GGNNCC 2 cut(s) 465, 519
NmeAIII GCCGAG 1 cut(s) 275
NmuCI GTSAC 2 cut(s) 7, 202
NspI RCATGY 1 cut(s) 700
PaeI GCATGC 1 cut(s) 700
PauI GCGCGC 1 cut(s) 669
PceI AGGCCT 1 cut(s) 419
PcsI WCGNNNNNNNCGW 1 cut(s) 467
PfeI GAWTC 4 cut(s) 251, 496, 776, 854
PflMI CCANNNNNTGG 1 cut(s) 508
PinAI ACCGGT 1 cut(s) 653
PkrI GCNGC 9 cut(s) 375, 378, 381, 384, 412, 480, 490, 493, 1129
PleI GAGTC 5 cut(s) 128, 261, 667, 742, 1113
PpsI GAGTC 5 cut(s) 128, 261, 667, 742, 1113
Psp6I CCWGG 2 cut(s) 387, 1097
PspGI CCWGG 2 cut(s) 387, 1097
PspN4I GGNNCC 2 cut(s) 465, 519
PspPI GGNCC 3 cut(s) 349, 606, 1007
PteI GCGCGC 1 cut(s) 669
PvuII CAGCTG 1 cut(s) 931
RsaI GTAC 1 cut(s) 719
RsaNI GTAC 1 cut(s) 718
RseI CAYNNNNRTG 1 cut(s) 222
SaqAI TTAA 2 cut(s) 17, 104
SatI GCNGC 9 cut(s) 374, 377, 380, 383, 411, 479, 489, 492, 1128
Sau3AI GATC 3 cut(s) 330, 742, 894
Sau96I GGNCC 3 cut(s) 349, 606, 1007
SchI GAGTC 5 cut(s) 128, 261, 668, 743, 1113
ScrFI CCNGG 4 cut(s) 389, 573, 574, 1099
SduI GDGCHC 2 cut(s) 624, 909
SfaNI GCATC 1 cut(s) 1014
SfcI CTRYAG 1 cut(s) 1011
SgrAI CRCCGGYG 1 cut(s) 632
SinI GGWCC 2 cut(s) 606, 1007
SmaI CCCGGG 1 cut(s) 574
SmiMI CAYNNNNRTG 1 cut(s) 222
SphI GCATGC 1 cut(s) 700
Sse9I AATT 5 cut(s) 22, 888, 920, 1016, 1131
SseBI AGGCCT 1 cut(s) 419
SsiI CCGC 9 cut(s) 283, 362, 383, 413, 484, 488, 491, 683, 851
SspMI CTAG 1 cut(s) 1082
StuI AGGCCT 1 cut(s) 419
StyD4I CCNGG 4 cut(s) 387, 571, 572, 1097
TaaI ACNGT 2 cut(s) 646, 772
TaiI ACGT 5 cut(s) 204, 473, 534, 588, 614
TaqI TCGA 3 cut(s) 432, 554, 918
TasI AATT 5 cut(s) 22, 888, 920, 1016, 1131
TauI GCSGC 3 cut(s) 385, 491, 494
TfiI GAWTC 4 cut(s) 251, 496, 776, 854
Tru1I TTAA 2 cut(s) 17, 104
Tru9I TTAA 2 cut(s) 17, 104
TscAI CASTG 2 cut(s) 82, 238
TseFI GTSAC 2 cut(s) 7, 202
TseI GCWGC 6 cut(s) 373, 376, 379, 410, 478, 1127
Tsp45I GTSAC 2 cut(s) 7, 202
TspDTI ATGAA 3 cut(s) 589, 852, 900
TspGWI ACGGA 1 cut(s) 1054
TspMI CCCGGG 1 cut(s) 572
TspRI CASTG 2 cut(s) 82, 238
Van91I CCANNNNNTGG 1 cut(s) 508
VneI GTGCAC 1 cut(s) 905
VpaK11BI GGWCC 2 cut(s) 606, 1007
XapI RAATTY 1 cut(s) 920
XbaI TCTAGA 1 cut(s) 1081
XceI RCATGY 1 cut(s) 700
XmaI CCCGGG 1 cut(s) 572
XmiI GTMKAC 1 cut(s) 705
XspI CTAG 1 cut(s) 1082
ZraI GACGTC 2 cut(s) 202, 586
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.