Rmu_ssc0000484.1_g000017

Protein FAM135B-like isoform X1

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000484.1
N/A
Physical Location & Seq
Reverse (-)
70985 .. 71349
365 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 279 bp
atgtttcggcatctaggatggctggttggtctcacctataaatcctcatcaaagcgattggcagatgccaacccggctctgcctccgcctcaactcaggccgccggtggctatgttggacgctgttcaggagatcgctatttacatccaccgcttccacaatctcgatcttttccaacaaggatggtaccaaattaagatcaccatgagatgggaggacagtgactttatgggcactccagcaagagttgttcaatatgaagctaccatcttgaaatga

Protein Analysis

92

Amino Acids

10.7

Weight (kDa)

9.16

Isoelectric Point (pI)

58.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 186
AccB1I GGYRCC 1 cut(s) 186
AccB7I CCANNNNNTGG 1 cut(s) 210
AciI CCGC 3 cut(s) 86, 101, 151
AfaI GTAC 1 cut(s) 188
AfiI CCNNNNNNNGG 1 cut(s) 210
AgsI TTSAA 2 cut(s) 254, 274
AluBI AGCT 1 cut(s) 263
AluI AGCT 1 cut(s) 263
Alw26I GTCTC 1 cut(s) 35
AoxI GGCC 1 cut(s) 98
Asp718I GGTACC 1 cut(s) 186
AsuC2I CCSGG 1 cut(s) 74
AsuHPI GGTGA 2 cut(s) 25, 193
BaeGI GKGCMC 1 cut(s) 236
BanI GGYRCC 1 cut(s) 186
BccI CCATC 4 cut(s) 12, 177, 204, 275
BcnI CCSGG 1 cut(s) 74
BcoDI GTCTC 1 cut(s) 35
BfaI CTAG 1 cut(s) 14
BglI GCCNNNNNGGC 1 cut(s) 74
BisI GCNGC 1 cut(s) 101
BlsI GCNGC 1 cut(s) 102
Bme1390I CCNGG 1 cut(s) 74
BmiI GGNNCC 1 cut(s) 188
BmrFI CCNGG 1 cut(s) 74
BmsI GCATC 2 cut(s) 19, 55
BpmI CTGGAG 1 cut(s) 222
BpuMI CCSGG 1 cut(s) 74
BsaI GGTCTC 1 cut(s) 35
Bsc4I CCNNNNNNNGG 1 cut(s) 210
Bse118I RCCGGY 1 cut(s) 103
BseGI GGATG 3 cut(s) 23, 144, 188
BseLI CCNNNNNNNGG 1 cut(s) 210
BseMII CTCAG 1 cut(s) 109
BseSI GKGCMC 1 cut(s) 236
BshFI GGCC 1 cut(s) 100
BshNI GGYRCC 1 cut(s) 186
BsiSI CCGG 2 cut(s) 74, 104
BslI CCNNNNNNNGG 1 cut(s) 210
BsmAI GTCTC 1 cut(s) 35
BsnI GGCC 1 cut(s) 100
Bso31I GGTCTC 1 cut(s) 35
Bsp1286I GDGCHC 1 cut(s) 236
Bsp143I GATC 3 cut(s) 132, 166, 198
BspACI CCGC 3 cut(s) 86, 101, 151
BspANI GGCC 1 cut(s) 100
BspCNI CTCAG 1 cut(s) 108
BspLI GGNNCC 1 cut(s) 188
BspT107I GGYRCC 1 cut(s) 186
BspTNI GGTCTC 1 cut(s) 35
BsrFI RCCGGY 1 cut(s) 103
BssAI RCCGGY 1 cut(s) 103
BssMI GATC 3 cut(s) 132, 166, 198
Bst4CI ACNGT 1 cut(s) 221
BstDEI CTNAG 1 cut(s) 95
BstF5I GGATG 3 cut(s) 23, 144, 188
BstKTI GATC 3 cut(s) 135, 169, 201
BstMAI GTCTC 1 cut(s) 35
BstMBI GATC 3 cut(s) 132, 166, 198
BstMWI GCNNNNNNNGC 1 cut(s) 74
BstSCI CCNGG 1 cut(s) 72
BstSLI GKGCMC 1 cut(s) 236
BsuRI GGCC 1 cut(s) 100
BtsCI GGATG 3 cut(s) 23, 144, 188
BtsIMutI CAGTG 1 cut(s) 226
Cfr10I RCCGGY 1 cut(s) 103
CseI GACGC 1 cut(s) 128
Csp6I GTAC 1 cut(s) 187
CviAII CATG 1 cut(s) 205
CviJI RGCY 5 cut(s) 22, 77, 100, 110, 263
CviKI_1 RGCY 5 cut(s) 22, 77, 100, 110, 263
CviQI GTAC 1 cut(s) 187
DdeI CTNAG 1 cut(s) 95
DpnI GATC 3 cut(s) 134, 168, 200
DpnII GATC 3 cut(s) 132, 166, 198
EciI GGCGGA 1 cut(s) 75
Eco31I GGTCTC 1 cut(s) 35
FaeI CATG 1 cut(s) 208
FaiI YATR 5 cut(s) 39, 113, 206, 230, 258
FatI CATG 1 cut(s) 204
Fnu4HI GCNGC 1 cut(s) 101
FokI GGATG 3 cut(s) 30, 131, 195
Fsp4HI GCNGC 1 cut(s) 101
FspBI CTAG 1 cut(s) 14
GluI GCNGC 1 cut(s) 101
GsuI CTGGAG 1 cut(s) 222
HaeIII GGCC 1 cut(s) 100
HapII CCGG 2 cut(s) 74, 104
HgaI GACGC 1 cut(s) 128
Hin1II CATG 1 cut(s) 208
HpaII CCGG 2 cut(s) 74, 104
HphI GGTGA 2 cut(s) 25, 193
Hpy188III TCNNGA 3 cut(s) 128, 164, 271
HpyCH4III ACNGT 1 cut(s) 221
HpyF10VI GCNNNNNNNGC 1 cut(s) 74
HpyF3I CTNAG 1 cut(s) 95
Hsp92II CATG 1 cut(s) 208
KpnI GGTACC 1 cut(s) 190
Kzo9I GATC 3 cut(s) 132, 166, 198
LpnPI CCDG 6 cut(s) 8, 82, 87, 113, 117, 252
LweI GCATC 2 cut(s) 19, 55
MaeI CTAG 1 cut(s) 14
MaeIII GTNAC 1 cut(s) 221
MalI GATC 3 cut(s) 134, 168, 200
MboI GATC 3 cut(s) 132, 166, 198
MhlI GDGCHC 1 cut(s) 236
MluCI AATT 1 cut(s) 192
MmeI TCCRAC 2 cut(s) 96, 199
MnlI CCTC 4 cut(s) 55, 93, 99, 208
MseI TTAA 1 cut(s) 195
MspI CCGG 2 cut(s) 74, 104
MspR9I CCNGG 1 cut(s) 74
MwoI GCNNNNNNNGC 1 cut(s) 74
NciI CCSGG 1 cut(s) 74
NdeII GATC 3 cut(s) 132, 166, 198
NlaIII CATG 1 cut(s) 208
NlaIV GGNNCC 1 cut(s) 188
NmuCI GTSAC 1 cut(s) 221
PflMI CCANNNNNTGG 1 cut(s) 210
PkrI GCNGC 1 cut(s) 102
PspN4I GGNNCC 1 cut(s) 188
RsaI GTAC 1 cut(s) 188
RsaNI GTAC 1 cut(s) 187
SaqAI TTAA 1 cut(s) 195
SatI GCNGC 1 cut(s) 101
Sau3AI GATC 3 cut(s) 132, 166, 198
ScrFI CCNGG 1 cut(s) 74
SduI GDGCHC 1 cut(s) 236
SetI ASST 2 cut(s) 38, 265
SfaNI GCATC 2 cut(s) 19, 55
SgrAI CRCCGGYG 1 cut(s) 103
Sse9I AATT 1 cut(s) 192
SsiI CCGC 3 cut(s) 86, 101, 151
SspMI CTAG 1 cut(s) 14
StyD4I CCNGG 1 cut(s) 72
TaaI ACNGT 1 cut(s) 221
TaqI TCGA 1 cut(s) 165
TasI AATT 1 cut(s) 192
TauI GCSGC 1 cut(s) 103
Tru1I TTAA 1 cut(s) 195
Tru9I TTAA 1 cut(s) 195
TscAI CASTG 1 cut(s) 226
TseFI GTSAC 1 cut(s) 221
Tsp45I GTSAC 1 cut(s) 221
TspDTI ATGAA 1 cut(s) 273
TspRI CASTG 1 cut(s) 226
Van91I CCANNNNNTGG 1 cut(s) 210
XspI CTAG 1 cut(s) 14
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.