TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| WHD_ROQ1 | PF23282 | 25 - 72 | 9.3e-08 | Disease resistance protein Roq1-like, winged-helix domain |
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No orthologs found for this gene in the current database.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 131 |
| AclWI | GGATC | 2 cut(s) | 226, 259 |
| AfaI | GTAC | 1 cut(s) | 227 |
| AgsI | TTSAA | 2 cut(s) | 185, 242 |
| AluBI | AGCT | 2 cut(s) | 14, 54 |
| AluI | AGCT | 2 cut(s) | 14, 54 |
| Alw26I | GTCTC | 1 cut(s) | 64 |
| AlwI | GGATC | 2 cut(s) | 226, 259 |
| AspS9I | GGNCC | 1 cut(s) | 195 |
| AvaII | GGWCC | 1 cut(s) | 195 |
| BccI | CCATC | 1 cut(s) | 146 |
| BcoDI | GTCTC | 1 cut(s) | 64 |
| Bme18I | GGWCC | 1 cut(s) | 195 |
| BmgT120I | GGNCC | 1 cut(s) | 195 |
| Bse1I | ACTGG | 1 cut(s) | 153 |
| BseGI | GGATG | 3 cut(s) | 136, 157, 161 |
| BseNI | ACTGG | 1 cut(s) | 153 |
| BsmAI | GTCTC | 1 cut(s) | 64 |
| Bsp143I | GATC | 2 cut(s) | 218, 251 |
| BspPI | GGATC | 2 cut(s) | 226, 259 |
| BspQI | GCTCTTC | 1 cut(s) | 237 |
| BsrI | ACTGG | 1 cut(s) | 153 |
| BssMI | GATC | 2 cut(s) | 218, 251 |
| Bst4CI | ACNGT | 1 cut(s) | 26 |
| Bst6I | CTCTTC | 1 cut(s) | 237 |
| BstDEI | CTNAG | 1 cut(s) | 255 |
| BstF5I | GGATG | 3 cut(s) | 136, 157, 161 |
| BstKTI | GATC | 2 cut(s) | 221, 254 |
| BstMAI | GTCTC | 1 cut(s) | 64 |
| BstMBI | GATC | 2 cut(s) | 218, 251 |
| BstNSI | RCATGY | 1 cut(s) | 108 |
| BstX2I | RGATCY | 2 cut(s) | 218, 251 |
| BstYI | RGATCY | 2 cut(s) | 218, 251 |
| BtsCI | GGATG | 3 cut(s) | 136, 157, 161 |
| BtsIMutI | CAGTG | 1 cut(s) | 31 |
| Cfr13I | GGNCC | 1 cut(s) | 195 |
| Csp6I | GTAC | 1 cut(s) | 226 |
| CviAII | CATG | 3 cut(s) | 77, 105, 248 |
| CviJI | RGCY | 2 cut(s) | 14, 54 |
| CviKI_1 | RGCY | 2 cut(s) | 14, 54 |
| CviQI | GTAC | 1 cut(s) | 226 |
| DdeI | CTNAG | 1 cut(s) | 255 |
| DpnI | GATC | 2 cut(s) | 220, 253 |
| DpnII | GATC | 2 cut(s) | 218, 251 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 131 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 131 |
| Eam1104I | CTCTTC | 1 cut(s) | 237 |
| EarI | CTCTTC | 1 cut(s) | 237 |
| Eco47I | GGWCC | 1 cut(s) | 195 |
| EcoO109I | RGGNCCY | 1 cut(s) | 195 |
| FaeI | CATG | 3 cut(s) | 80, 108, 251 |
| FaiI | YATR | 7 cut(s) | 17, 57, 78, 99, 106, 249, 272 |
| FatI | CATG | 3 cut(s) | 76, 104, 247 |
| FokI | GGATG | 3 cut(s) | 143, 164, 168 |
| Hin1II | CATG | 3 cut(s) | 80, 108, 251 |
| HincII | GTYRAC | 1 cut(s) | 204 |
| HindII | GTYRAC | 1 cut(s) | 204 |
| HpaI | GTTAAC | 1 cut(s) | 204 |
| Hpy166II | GTNNAC | 2 cut(s) | 124, 204 |
| Hpy188I | TCNGA | 1 cut(s) | 143 |
| Hpy8I | GTNNAC | 2 cut(s) | 124, 204 |
| HpyCH4III | ACNGT | 1 cut(s) | 26 |
| HpyF3I | CTNAG | 1 cut(s) | 255 |
| Hsp92II | CATG | 3 cut(s) | 80, 108, 251 |
| KspAI | GTTAAC | 1 cut(s) | 204 |
| Kzo9I | GATC | 2 cut(s) | 218, 251 |
| LguI | GCTCTTC | 1 cut(s) | 237 |
| LpnPI | CCDG | 1 cut(s) | 134 |
| MalI | GATC | 2 cut(s) | 220, 253 |
| MboI | GATC | 2 cut(s) | 218, 251 |
| MboII | GAAGA | 1 cut(s) | 254 |
| MflI | RGATCY | 2 cut(s) | 218, 251 |
| MluCI | AATT | 2 cut(s) | 86, 186 |
| MmeI | TCCRAC | 1 cut(s) | 97 |
| MnlI | CCTC | 2 cut(s) | 104, 245 |
| MseI | TTAA | 1 cut(s) | 203 |
| NdeII | GATC | 2 cut(s) | 218, 251 |
| NlaIII | CATG | 3 cut(s) | 80, 108, 251 |
| NspI | RCATGY | 1 cut(s) | 108 |
| PciSI | GCTCTTC | 1 cut(s) | 237 |
| PpuMI | RGGWCCY | 1 cut(s) | 195 |
| Psp5II | RGGWCCY | 1 cut(s) | 195 |
| PspPI | GGNCC | 1 cut(s) | 195 |
| PspPPI | RGGWCCY | 1 cut(s) | 195 |
| PsuI | RGATCY | 2 cut(s) | 218, 251 |
| RsaI | GTAC | 1 cut(s) | 227 |
| RsaNI | GTAC | 1 cut(s) | 226 |
| SapI | GCTCTTC | 1 cut(s) | 237 |
| SaqAI | TTAA | 1 cut(s) | 203 |
| Sau3AI | GATC | 2 cut(s) | 218, 251 |
| Sau96I | GGNCC | 1 cut(s) | 195 |
| SetI | ASST | 4 cut(s) | 16, 56, 197, 231 |
| SgeI | CNNG | 9 cut(s) | 63, 80, 89, 117, 139, 161, 183, 211, 260 |
| SinI | GGWCC | 1 cut(s) | 195 |
| Sse9I | AATT | 2 cut(s) | 86, 186 |
| TaaI | ACNGT | 1 cut(s) | 26 |
| TasI | AATT | 2 cut(s) | 86, 186 |
| Tru1I | TTAA | 1 cut(s) | 203 |
| Tru9I | TTAA | 1 cut(s) | 203 |
| TscAI | CASTG | 1 cut(s) | 31 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspRI | CASTG | 1 cut(s) | 31 |
| VpaK11BI | GGWCC | 1 cut(s) | 195 |
| XceI | RCATGY | 1 cut(s) | 108 |