Rroxscaffold_5G00369210

CBL-interacting serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
N/A
Physical Location & Seq
Reverse (-)
51048342 .. 51049435
1094 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_5G00369210.1

Sequence Viewer

Length: 213 bp
ATGCAACAGAATAAGGGGCAGAGAAATCTGGGCAGTCTCTCAGCTGCAGCAGAGGTGTTTGAGTTAAGCCCAACATTATACGTAGTTGAATTAAGAAAATCTTATGGAGAATATATACGGTTGCGTAAAAAACTATCAAATGATTTAGGTGTTCCATCTAGCCAAGAATTGTTGGCCAGCGACGTATTGAAGTCCAGCTCTTTGCAGAGTTAA

Protein Analysis

70

Amino Acids

7.73

Weight (kDa)

9.16

Isoelectric Point (pI)

52.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 174
AgsI TTSAA 2 cut(s) 89, 190
AluBI AGCT 2 cut(s) 44, 198
AluI AGCT 2 cut(s) 44, 198
Alw26I GTCTC 1 cut(s) 41
AoxI GGCC 1 cut(s) 174
ApeKI GCWGC 2 cut(s) 44, 47
BalI TGGCCA 1 cut(s) 176
BbvI GCAGC 2 cut(s) 31, 59
BccI CCATC 1 cut(s) 163
BcoDI GTCTC 1 cut(s) 41
BfaI CTAG 1 cut(s) 159
BfmI CTRYAG 1 cut(s) 45
BisI GCNGC 2 cut(s) 45, 48
BlsI GCNGC 2 cut(s) 46, 49
BsaAI YACGTR 1 cut(s) 82
BseMII CTCAG 1 cut(s) 54
BseXI GCAGC 2 cut(s) 31, 59
BshFI GGCC 1 cut(s) 176
BsmAI GTCTC 1 cut(s) 41
BsnI GGCC 1 cut(s) 176
BspANI GGCC 1 cut(s) 176
BspCNI CTCAG 1 cut(s) 53
BspMAI CTGCAG 1 cut(s) 49
Bst4CI ACNGT 1 cut(s) 120
BstBAI YACGTR 1 cut(s) 82
BstC8I GCNNGC 1 cut(s) 178
BstDEI CTNAG 1 cut(s) 40
BstMAI GTCTC 1 cut(s) 41
BstSFI CTRYAG 1 cut(s) 45
BstSNI TACGTA 1 cut(s) 82
BstV1I GCAGC 2 cut(s) 31, 59
BsuRI GGCC 1 cut(s) 176
Cac8I GCNNGC 1 cut(s) 178
CviJI RGCY 5 cut(s) 44, 69, 162, 176, 198
CviKI_1 RGCY 5 cut(s) 44, 69, 162, 176, 198
DdeI CTNAG 1 cut(s) 40
EaeI YGGCCR 1 cut(s) 174
Eco105I TACGTA 1 cut(s) 82
FaiI YATR 4 cut(s) 79, 105, 114, 116
FalI AAGNNNNNCTT 2 cut(s) 85, 117
Fnu4HI GCNGC 2 cut(s) 45, 48
Fsp4HI GCNGC 2 cut(s) 45, 48
FspBI CTAG 1 cut(s) 159
GluI GCNGC 2 cut(s) 45, 48
HaeIII GGCC 1 cut(s) 176
Hpy99I CGWCG 1 cut(s) 185
HpyCH4III ACNGT 1 cut(s) 120
HpyCH4IV ACGT 2 cut(s) 81, 183
HpyCH4V TGCA 3 cut(s) 4, 47, 205
HpyF3I CTNAG 1 cut(s) 40
HpySE526I ACGT 2 cut(s) 81, 183
LpnPI CCDG 3 cut(s) 14, 190, 208
Lsp1109I GCAGC 2 cut(s) 31, 59
MaeI CTAG 1 cut(s) 159
MaeII ACGT 2 cut(s) 81, 183
MlsI TGGCCA 1 cut(s) 176
MluCI AATT 2 cut(s) 89, 167
MluNI TGGCCA 1 cut(s) 176
MnlI CCTC 1 cut(s) 46
Mox20I TGGCCA 1 cut(s) 176
MscI TGGCCA 1 cut(s) 176
MseI TTAA 3 cut(s) 65, 92, 211
Msp20I TGGCCA 1 cut(s) 176
MspA1I CMGCKG 1 cut(s) 44
PkrI GCNGC 2 cut(s) 46, 49
Ppu21I YACGTR 1 cut(s) 82
PstI CTGCAG 1 cut(s) 49
PvuII CAGCTG 1 cut(s) 44
SaqAI TTAA 3 cut(s) 65, 92, 211
SatI GCNGC 2 cut(s) 45, 48
SetI ASST 6 cut(s) 46, 57, 84, 151, 186, 200
SfcI CTRYAG 1 cut(s) 45
SgeI CNNG 5 cut(s) 41, 171, 176, 189, 207
SnaBI TACGTA 1 cut(s) 82
Sse9I AATT 2 cut(s) 89, 167
SspMI CTAG 1 cut(s) 159
TaaI ACNGT 1 cut(s) 120
TaiI ACGT 2 cut(s) 84, 186
TasI AATT 2 cut(s) 89, 167
Tru1I TTAA 3 cut(s) 65, 92, 211
Tru9I TTAA 3 cut(s) 65, 92, 211
TseI GCWGC 2 cut(s) 44, 47
XspI CTAG 1 cut(s) 159
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.