Rorug01G0087300

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
N/A
Physical Location & Seq
Forward (+)
14129507 .. 14132637
3131 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0087300.1

Sequence Viewer

Length: 2475 bp
ATGAGCTCACAGCTCTTGCCAGTGCTCTCCATTACCAACACCAAAACACCACCACCACCACCAATATCAACTAGACTTCCAATACCAACATCAACATCAACATCAACACTTCACCAGCTTTCCCAAAGAACCCACATTCCTTCTCATGTCTACAAGCACCCTTCAGCTATTCTCCTCGAGCTCTGCACTTCCATGAGAGAGCTCCACCAAATCTTCCCCCTCATAATCAAGAACGGTCTCTACAACGAGCACTACTTCCAGACCAAGCTCGTCAGCCTCTTCTGCAAATACGGCAGCCCAATTGAAGCCCACCGGGTTTTCGACGCCGTCGGGGACAAACTCGACGTTTTCTACCACACTCTGCTTAAAGGGTACGCCAAGAACTCCTCTTTAGGGGATGCCATTTCCTTCTTTTGCCGATTGAAGCACGATGGGGTTGCCCCTGTTGTGTACAATTTTACTTACTTGCTCAAGGCGTGTGGCGATAATGCTGACCTCAGGAGGGGGAAGGAGATTCATGGCTCTCTGATTACCAATGGCTTTGCTACTAATCTGTTTGCGATGACCGGAGTTGTGAATTTGTATGCTAAATGTAGGCAGATTGATGATGCATATAAGATGTTTGATAGAATGCCTGAGAGGGACTTGGTTTCTTGGAACACTATCGTTGCTGCTTATGCGCAAAATGGGTTGGCCAGGAGAGCTTTGGAGTTGGTTATTAGGATGCAGGAGGAAGGCCAGAGGCCCGATTCCATCACATTGGTCACTGCACTGCCTGCTGTTGCAGATTTTGGGTCCTTGGTGATCGGAAAGTCGATTCATGCCTATGTTATAAGAGCAAGTTTTGAGTCACTTGTTAACATTTCTACCGCTCTTCTAGACATGTATTCGAAATGTGGATCTGTGGCCACTGCTCGGTCGATTTTCAACAGGATGAATCACAAGACTGTTGTTTCCTGGAATTCTATGATAGATGGGTATGTACAAAATGAAGATCCTGAGGAAGCAATGGCGATTTTCCAGAAGATGCTGGATGAAGGCTTTGAACCAACCAATGTTACTATTATGGAAGCTTTACATGCTTGTGCTGATTTGGGAGATCTTGAGCGGGGAAAGTTTGTGCATAAATTATTGGATCAACTGAACCTTGGATATGATGTCTCAGTTGTGAATTCTTTGATATCCCTGTATTCCAAGTGTAAGAGAGTTGATATTGCTGCAAAATTGTTTAGAGGCTTAAAGGGTAAGACCATTGTCTCATGGAATGCCATGATATTAGGTTTTGCACAGAATGGTCGCATCAGCGAGGCTTTAAGTCACTTCTGTGAGATGCAATCTCAAAATATAAAGCCAGATTCGTTTACAATGGTGAGTGTAATTCCAGCTCTTGCAGAGTTATCAGTTACACGTCAGGCTAAGTGGATTCATGGACTTGTTGTTAGAAAATGTTTTGACAAAAGCGTTTTTGTGATGACTGCTCTTGTTGATATGTACGCAAAATGTGGAGCTGTCCGCACTGCGAGAAAACTTTTTGACATGATGGATGACCGGCATGTGACAACATGGAACAGTATGATCGATGGATATGGAACAAATGGGCTTGGAAAGGCTGCTGTGGAACTGTTCAATGAAATGAAAAAGGGCATAATAAAGCCAAATGATATAACATTTCTATGTGTGATATCCGCTTGTTCTCATTCAGGATTGGTGGAAGACGGTCTTCAATACTTTGAAAGCATGAAGGATGACTATGGCTTGGAGCCTGCTATGGATCACTATGGTGCCATGGTTGATCTTCTTGGTCGAGCTGGCCGACTAAATGAAGCTTGGGATTTTATTCAAAAGATGCCTATGGAACCTGGCATTACAGTCTTTGGTGCAATGTTAGGGGCTTGCAGAATTCATAAAAATGTTGAATTGGGGGAAAAGGCAGCAGATAAAATATTTGAGTTGAACCCTGTTGAAGGTGGGTACCATGTTTTGCTTGCTAACATATATTCCACAGCTTCAATGTGGGACAAGGTGGCCAAAGTGCGAACAACAATGGAGAAGAAAGGGCTCAAGAAAACTCCAGGCTGCAGTTTAGTGGATTTAAAGAACCAAGTTCACACTTTCTATTCTGGAAGTACAAGCCATCCCCAATCCAAGAGAATATATACGTATCTGGAGACACTGGGAGATAAGATCAAGGCTGCTGGTTATGTGCCGGACACAAATTCAATTCATGATGTGGAAGATGATGTCAAGGAGCAATTGCTAAATAGCCATAGTGAGAAGCTGGCTATTGCATTTGGACTCTTGAATACTACCCCGGGTACAACAATACACATTCGAAAGAACCTACGAGTTTGTGGTGATTGCCACAACGCAACCAAGTACATTTCACTAGTAACTGGAAGGGAAATCATAGTGCGTGATATGCATCGGTTCCATCATTTCAGGAATGGAACTTGTTCTTGTGGAGATTATTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

824

Amino Acids

91.89

Weight (kDa)

8.34

Isoelectric Point (pI)

30.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 215 - 256 1e-06 PPR repeat family
PPR_2 PF13041 316 - 355 8.9e-11 PPR repeat family
PPR PF01535 318 - 348 1.1e-09 PPR repeat
PPR_2 PF13041 417 - 464 1.6e-11 PPR repeat family
PPR PF01535 419 - 449 3.4e-07 PPR repeat
PPR_2 PF13041 519 - 565 2.7e-13 PPR repeat family
PPR PF01535 521 - 547 5.3e-08 PPR repeat
E_motif PF20431 635 - 696 8.4e-20 E motif
DYW_deaminase PF14432 733 - 824 1.9e-41 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 833
Acc16I TGCGCA 1 cut(s) 681
Acc65I GGTACC 1 cut(s) 1971
AccB1I GGYRCC 2 cut(s) 1781, 1971
AccBSI CCGCTC 2 cut(s) 872, 1108
AccI GTMKAC 1 cut(s) 150
AciI CCGC 4 cut(s) 870, 1108, 1513, 1686
AclWI GGATC 4 cut(s) 907, 989, 1143, 1779
AcoI YGGCCR 4 cut(s) 693, 906, 1810, 2025
AcsI RAATTY 5 cut(s) 577, 961, 1171, 1899, 2215
AcuI CTGAAG 1 cut(s) 147
AcyI GRCGYC 1 cut(s) 324
AfaI GTAC 8 cut(s) 374, 452, 984, 1493, 1973, 2128, 2317, 2378
AfiI CCNNNNNNNGG 4 cut(s) 393, 502, 915, 1964
AflIII ACRYGT 2 cut(s) 882, 1406
AhlI ACTAGT 1 cut(s) 2386
AjiI CACGTC 1 cut(s) 1409
AjnI CCWGG 4 cut(s) 695, 956, 1858, 2071
AleI CACNNNNGTG 2 cut(s) 1323, 1779
AloI GAACNNNNNNTCC 2 cut(s) 121, 153
Alw21I GWGCWC 5 cut(s) 8, 27, 183, 204, 252
Alw26I GTCTC 4 cut(s) 242, 1165, 1261, 2162
AlwI GGATC 4 cut(s) 907, 989, 1143, 1779
Ama87I CYCGRG 2 cut(s) 176, 2311
AoxI GGCC 6 cut(s) 693, 736, 743, 906, 1810, 2025
ApeKI GCWGC 7 cut(s) 294, 671, 1217, 1610, 1931, 2076, 2192
ApoI RAATTY 5 cut(s) 577, 961, 1171, 1899, 2215
Asp700I GAANNNNTTC 1 cut(s) 2452
Asp718I GGTACC 1 cut(s) 1971
AspLEI GCGC 1 cut(s) 682
AspS9I GGNCC 2 cut(s) 744, 795
AsuC2I CCSGG 3 cut(s) 314, 2312, 2313
AsuHPI GGTGA 4 cut(s) 104, 814, 1381, 2366
AsuII TTCGAA 2 cut(s) 890, 2332
AvaI CYCGRG 2 cut(s) 176, 2311
AvaII GGWCC 1 cut(s) 795
AxyI CCTNAGG 2 cut(s) 497, 999
BalI TGGCCA 3 cut(s) 695, 908, 2027
BanI GGYRCC 2 cut(s) 1781, 1971
BanII GRGCYC 4 cut(s) 8, 183, 204, 2061
BbsI GAAGAC 2 cut(s) 1712, 1719
Bbv12I GWGCWC 5 cut(s) 8, 27, 183, 204, 252
BbvI GCAGC 7 cut(s) 306, 658, 1204, 1597, 1943, 2063, 2179
BccI CCATC 7 cut(s) 425, 761, 968, 1534, 1574, 2142, 2439
BceAI ACGGC 2 cut(s) 307, 311
BcgI CGANNNNNNTGC 2 cut(s) 419, 453
BciT130I CCWGG 4 cut(s) 697, 958, 1860, 2073
BcnI CCSGG 3 cut(s) 314, 2312, 2313
BcoDI GTCTC 4 cut(s) 242, 1165, 1261, 2162
BcuI ACTAGT 1 cut(s) 2386
BfaI CTAG 3 cut(s) 72, 878, 2387
BfmI CTRYAG 1 cut(s) 2077
BglII AGATCT 1 cut(s) 1099
BisI GCNGC 7 cut(s) 295, 672, 1218, 1611, 1932, 2077, 2193
BlsI GCNGC 7 cut(s) 296, 673, 1219, 1612, 1933, 2078, 2194
Bme1390I CCNGG 7 cut(s) 314, 697, 958, 1860, 2073, 2312, 2313
Bme18I GGWCC 1 cut(s) 795
BmeT110I CYCGRG 2 cut(s) 176, 2311
BmgBI CACGTC 1 cut(s) 1409
BmgT120I GGNCC 2 cut(s) 744, 795
BmiI GGNNCC 6 cut(s) 796, 1761, 1783, 1857, 1973, 2429
BmrFI CCNGG 7 cut(s) 314, 697, 958, 1860, 2073, 2312, 2313
BmrI ACTGGG 1 cut(s) 2183
BmsI GCATC 8 cut(s) 388, 598, 714, 1017, 1308, 1320, 1836, 2431
BmuI ACTGGG 1 cut(s) 2183
BoxI GACNNNNGTC 1 cut(s) 1253
BpiI GAAGAC 2 cut(s) 1712, 1719
BpmI CTGGAG 2 cut(s) 2055, 2186
Bpu14I TTCGAA 2 cut(s) 890, 2332
BpuEI CTTGAG 3 cut(s) 455, 1124, 2045
BpuMI CCSGG 3 cut(s) 314, 2312, 2313
Bsa29I ATCGAT 1 cut(s) 1578
BsaAI YACGTR 1 cut(s) 2160
BsaBI GATNNNNATC 1 cut(s) 2421
BsaHI GRCGYC 1 cut(s) 324
BsaI GGTCTC 1 cut(s) 242
BsaJI CCNNGG 5 cut(s) 798, 1147, 1785, 2310, 2311
BsaWI WCCGGW 1 cut(s) 566
Bsc4I CCNNNNNNNGG 4 cut(s) 393, 502, 915, 1964
Bse118I RCCGGY 1 cut(s) 1548
Bse1I ACTGG 3 cut(s) 20, 2178, 2398
Bse21I CCTNAGG 2 cut(s) 497, 999
Bse3DI GCAATG 2 cut(s) 1014, 1887
Bse8I GATNNNNATC 1 cut(s) 2421
BseBI CCWGG 4 cut(s) 697, 958, 1860, 2073
BseCI ATCGAT 1 cut(s) 1578
BseDI CCNNGG 5 cut(s) 798, 1147, 1785, 2310, 2311
BseGI GGATG 7 cut(s) 403, 729, 939, 1039, 1549, 1750, 2134
BseJI GATNNNNATC 1 cut(s) 2421
BseLI CCNNNNNNNGG 4 cut(s) 393, 502, 915, 1964
BseMI GCAATG 2 cut(s) 1014, 1887
BseMII CTCAG 4 cut(s) 511, 627, 990, 1176
BseNI ACTGG 3 cut(s) 20, 2178, 2398
BseRI GAGGAG 2 cut(s) 164, 376
BseXI GCAGC 7 cut(s) 306, 658, 1204, 1597, 1943, 2063, 2179
BsgI GTGCAG 2 cut(s) 169, 753
Bsh1285I CGRYCG 1 cut(s) 920
BshFI GGCC 6 cut(s) 695, 738, 745, 908, 1812, 2027
BshNI GGYRCC 2 cut(s) 1781, 1971
BshVI ATCGAT 1 cut(s) 1578
BsiEI CGRYCG 1 cut(s) 920
BsiHKAI GWGCWC 5 cut(s) 8, 27, 183, 204, 252
BsiHKCI CYCGRG 2 cut(s) 176, 2311
BsiSI CCGG 5 cut(s) 313, 567, 1549, 2207, 2312
BslFI GGGAC 3 cut(s) 347, 656, 2030
BslI CCNNNNNNNGG 4 cut(s) 393, 502, 915, 1964
BsmAI GTCTC 4 cut(s) 242, 1165, 1261, 2162
BsmFI GGGAC 3 cut(s) 347, 656, 2030
BsmI GAATGC 2 cut(s) 636, 1270
BsnI GGCC 6 cut(s) 695, 738, 745, 908, 1812, 2027
Bso31I GGTCTC 1 cut(s) 242
BsoBI CYCGRG 2 cut(s) 176, 2311
Bsp119I TTCGAA 2 cut(s) 890, 2332
Bsp1286I GDGCHC 6 cut(s) 8, 27, 183, 204, 252, 2061
Bsp1407I TGTACA 2 cut(s) 450, 982
Bsp143I GATC 9 cut(s) 804, 899, 994, 1099, 1135, 1575, 1771, 1792, 2184
Bsp19I CCATGG 1 cut(s) 1785
BspACI CCGC 4 cut(s) 870, 1108, 1513, 1686
BspANI GGCC 6 cut(s) 695, 738, 745, 908, 1812, 2027
BspCNI CTCAG 4 cut(s) 510, 628, 991, 1175
BspDI ATCGAT 1 cut(s) 1578
BspHI TCATGA 1 cut(s) 2224
BspLI GGNNCC 6 cut(s) 796, 1761, 1783, 1857, 1973, 2429
BspMAI CTGCAG 1 cut(s) 2081
BspPI GGATC 4 cut(s) 907, 989, 1143, 1779
BspQI GCTCTTC 1 cut(s) 879
BspT104I TTCGAA 2 cut(s) 890, 2332
BspT107I GGYRCC 2 cut(s) 1781, 1971
BspTNI GGTCTC 1 cut(s) 242
BsrBI CCGCTC 2 cut(s) 872, 1108
BsrDI GCAATG 2 cut(s) 1014, 1887
BsrFI RCCGGY 1 cut(s) 1548
BsrGI TGTACA 2 cut(s) 450, 982
BsrI ACTGG 3 cut(s) 20, 2178, 2398
BssAI RCCGGY 1 cut(s) 1548
BssECI CCNNGG 5 cut(s) 798, 1147, 1785, 2310, 2311
BssMI GATC 9 cut(s) 804, 899, 994, 1099, 1135, 1575, 1771, 1792, 2184
BssNI GRCGYC 1 cut(s) 324
BssT1I CCWWGG 3 cut(s) 798, 1147, 1785
Bst2UI CCWGG 4 cut(s) 697, 958, 1860, 2073
Bst4CI ACNGT 6 cut(s) 236, 949, 1571, 1623, 1718, 1870
Bst6I CTCTTC 2 cut(s) 284, 879
BstACI GRCGYC 1 cut(s) 324
BstAPI GCANNNNNTGC 1 cut(s) 776
BstAUI TGTACA 2 cut(s) 450, 982
BstBAI YACGTR 1 cut(s) 2160
BstBI TTCGAA 2 cut(s) 890, 2332
BstC8I GCNNGC 6 cut(s) 777, 1764, 1810, 1894, 1986, 2280
BstDEI CTNAG 5 cut(s) 497, 636, 999, 1162, 1416
BstDSI CCRYGG 1 cut(s) 1785
BstENI CCTNNNNNAGG 1 cut(s) 1962
BstF5I GGATG 7 cut(s) 403, 729, 939, 1039, 1549, 1750, 2134
BstHHI GCGC 1 cut(s) 682
BstKTI GATC 9 cut(s) 807, 902, 997, 1102, 1138, 1578, 1774, 1795, 2187
BstMAI GTCTC 4 cut(s) 242, 1165, 1261, 2162
BstMBI GATC 9 cut(s) 804, 899, 994, 1099, 1135, 1575, 1771, 1792, 2184
BstMCI CGRYCG 1 cut(s) 920
BstMWI GCNNNNNNNGC 7 cut(s) 282, 291, 677, 701, 776, 1079, 2419
BstNI CCWGG 4 cut(s) 697, 958, 1860, 2073
BstNSI RCATGY 3 cut(s) 886, 1082, 1556
BstPAI GACNNNNGTC 1 cut(s) 1253
BstSCI CCNGG 7 cut(s) 312, 695, 956, 1858, 2071, 2310, 2311
BstSFI CTRYAG 1 cut(s) 2077
BstSNI TACGTA 1 cut(s) 2160
BstV1I GCAGC 7 cut(s) 306, 658, 1204, 1597, 1943, 2063, 2179
BstV2I GAAGAC 2 cut(s) 1712, 1719
BstX2I RGATCY 3 cut(s) 899, 994, 1099
BstXI CCANNNNNNTGG 1 cut(s) 760
BstYI RGATCY 3 cut(s) 899, 994, 1099
Bsu15I ATCGAT 1 cut(s) 1578
Bsu36I CCTNAGG 2 cut(s) 497, 999
BsuRI GGCC 6 cut(s) 695, 738, 745, 908, 1812, 2027
BsuTUI ATCGAT 1 cut(s) 1578
BtgI CCRYGG 1 cut(s) 1785
BtgZI GCGATG 1 cut(s) 575
BtrI CACGTC 1 cut(s) 1409
BtsCI GGATG 7 cut(s) 403, 729, 939, 1039, 1549, 1750, 2134
BtsI GCAGTG 4 cut(s) 765, 770, 909, 1515
BtsIMutI CAGTG 6 cut(s) 27, 765, 770, 909, 1515, 2171
Cac8I GCNNGC 6 cut(s) 777, 1764, 1810, 1894, 1986, 2280
CciI TCATGA 1 cut(s) 2224
CfoI GCGC 1 cut(s) 682
Cfr10I RCCGGY 1 cut(s) 1548
Cfr13I GGNCC 2 cut(s) 744, 795
Cfr9I CCCGGG 1 cut(s) 2311
ClaI ATCGAT 1 cut(s) 1578
CseI GACGC 1 cut(s) 332
Csp6I GTAC 8 cut(s) 373, 451, 983, 1492, 1972, 2127, 2316, 2377
CspCI CAANNNNNGTGG 2 cut(s) 460, 495
CviQI GTAC 8 cut(s) 373, 451, 983, 1492, 1972, 2127, 2316, 2377
DdeI CTNAG 5 cut(s) 497, 636, 999, 1162, 1416
DpnI GATC 9 cut(s) 806, 901, 996, 1101, 1137, 1577, 1773, 1794, 2186
DpnII GATC 9 cut(s) 804, 899, 994, 1099, 1135, 1575, 1771, 1792, 2184
DraI TTTAAA 1 cut(s) 2094
EaeI YGGCCR 4 cut(s) 693, 906, 1810, 2025
Eam1104I CTCTTC 2 cut(s) 284, 879
EarI CTCTTC 2 cut(s) 284, 879
Ecl136II GAGCTC 3 cut(s) 6, 181, 202
Eco105I TACGTA 1 cut(s) 2160
Eco130I CCWWGG 3 cut(s) 798, 1147, 1785
Eco24I GRGCYC 4 cut(s) 8, 183, 204, 2061
Eco31I GGTCTC 1 cut(s) 242
Eco32I GATATC 2 cut(s) 1182, 1683
Eco47I GGWCC 1 cut(s) 795
Eco53kI GAGCTC 3 cut(s) 6, 181, 202
Eco57I CTGAAG 1 cut(s) 147
Eco81I CCTNAGG 2 cut(s) 497, 999
Eco88I CYCGRG 2 cut(s) 176, 2311
EcoICRI GAGCTC 3 cut(s) 6, 181, 202
EcoNI CCTNNNNNAGG 1 cut(s) 1962
EcoO109I RGGNCCY 1 cut(s) 795
EcoRI GAATTC 3 cut(s) 961, 1171, 1899
EcoRII CCWGG 4 cut(s) 695, 956, 1858, 2071
EcoRV GATATC 2 cut(s) 1182, 1683
EcoT14I CCWWGG 3 cut(s) 798, 1147, 1785
EcoT22I ATGCAT 2 cut(s) 613, 2424
EcoT38I GRGCYC 4 cut(s) 8, 183, 204, 2061
ErhI CCWWGG 3 cut(s) 798, 1147, 1785
FalI AAGNNNNNCTT 2 cut(s) 1704, 1736
FaqI GGGAC 3 cut(s) 347, 656, 2030
FauI CCCGC 1 cut(s) 1101
FblI GTMKAC 1 cut(s) 150
Fnu4HI GCNGC 7 cut(s) 295, 672, 1218, 1611, 1932, 2077, 2193
FokI GGATG 7 cut(s) 410, 736, 946, 1046, 1556, 1757, 2121
FriOI GRGCYC 4 cut(s) 8, 183, 204, 2061
Fsp4HI GCNGC 7 cut(s) 295, 672, 1218, 1611, 1932, 2077, 2193
FspBI CTAG 3 cut(s) 72, 878, 2387
FspI TGCGCA 1 cut(s) 681
GlaI GCGC 1 cut(s) 681
GluI GCNGC 7 cut(s) 295, 672, 1218, 1611, 1932, 2077, 2193
GsuI CTGGAG 2 cut(s) 2055, 2186
HaeIII GGCC 6 cut(s) 695, 738, 745, 908, 1812, 2027
HapII CCGG 5 cut(s) 313, 567, 1549, 2207, 2312
HgaI GACGC 1 cut(s) 332
HhaI GCGC 1 cut(s) 682
Hin1I GRCGYC 1 cut(s) 324
Hin6I GCGC 1 cut(s) 680
HinP1I GCGC 1 cut(s) 680
HincII GTYRAC 1 cut(s) 859
HindII GTYRAC 1 cut(s) 859
HindIII AAGCTT 2 cut(s) 1071, 1824
HinfI GANTC 8 cut(s) 514, 749, 817, 848, 937, 1355, 1423, 2295
HpaI GTTAAC 1 cut(s) 859
HpaII CCGG 5 cut(s) 313, 567, 1549, 2207, 2312
HphI GGTGA 4 cut(s) 104, 814, 1381, 2366
Hpy166II GTNNAC 5 cut(s) 151, 451, 859, 1362, 2107
Hpy188I TCNGA 2 cut(s) 528, 809
Hpy8I GTNNAC 5 cut(s) 151, 451, 859, 1362, 2107
Hpy99I CGWCG 3 cut(s) 326, 332, 347
HpyAV CCTTC 9 cut(s) 150, 171, 418, 502, 728, 1031, 1735, 1958, 2391
HpyCH4III ACNGT 6 cut(s) 236, 949, 1571, 1623, 1718, 1870
HpyCH4IV ACGT 3 cut(s) 345, 1408, 2159
HpyF10VI GCNNNNNNNGC 7 cut(s) 282, 291, 677, 701, 776, 1079, 2419
HpyF3I CTNAG 5 cut(s) 497, 636, 999, 1162, 1416
HpySE526I ACGT 3 cut(s) 345, 1408, 2159
Hsp92I GRCGYC 1 cut(s) 324
HspAI GCGC 1 cut(s) 680
KpnI GGTACC 1 cut(s) 1975
KspAI GTTAAC 1 cut(s) 859
Kzo9I GATC 9 cut(s) 804, 899, 994, 1099, 1135, 1575, 1771, 1792, 2184
LguI GCTCTTC 1 cut(s) 879
LmnI GCTCC 4 cut(s) 207, 1505, 1759, 2248
Lsp1109I GCAGC 7 cut(s) 306, 658, 1204, 1597, 1943, 2063, 2179
LweI GCATC 8 cut(s) 388, 598, 714, 1017, 1308, 1320, 1836, 2431
MaeI CTAG 3 cut(s) 72, 878, 2387
MaeII ACGT 3 cut(s) 345, 1408, 2159
MaeIII GTNAC 7 cut(s) 763, 849, 1057, 1316, 1402, 1555, 2389
MalI GATC 9 cut(s) 806, 901, 996, 1101, 1137, 1577, 1773, 1794, 2186
MbiI CCGCTC 2 cut(s) 872, 1108
MboI GATC 9 cut(s) 804, 899, 994, 1099, 1135, 1575, 1771, 1792, 2184
MfeI CAATTG 2 cut(s) 300, 2252
MflI RGATCY 3 cut(s) 899, 994, 1099
MhlI GDGCHC 6 cut(s) 8, 27, 183, 204, 252, 2061
MlsI TGGCCA 3 cut(s) 695, 908, 2027
MluNI TGGCCA 3 cut(s) 695, 908, 2027
MlyI GAGTC 2 cut(s) 857, 2289
Mox20I TGGCCA 3 cut(s) 695, 908, 2027
Mph1103I ATGCAT 2 cut(s) 613, 2424
MroXI GAANNNNTTC 1 cut(s) 2452
MscI TGGCCA 3 cut(s) 695, 908, 2027
MseI TTAA 5 cut(s) 366, 858, 1238, 1313, 2093
MslI CAYNNNNRTG 7 cut(s) 191, 825, 1083, 1323, 1672, 1779, 1908
Msp20I TGGCCA 3 cut(s) 695, 908, 2027
MspI CCGG 5 cut(s) 313, 567, 1549, 2207, 2312
MspR9I CCNGG 7 cut(s) 314, 697, 958, 1860, 2073, 2312, 2313
MunI CAATTG 2 cut(s) 300, 2252
Mva1269I GAATGC 2 cut(s) 636, 1270
MvaI CCWGG 4 cut(s) 697, 958, 1860, 2073
MwoI GCNNNNNNNGC 7 cut(s) 282, 291, 677, 701, 776, 1079, 2419
NciI CCSGG 3 cut(s) 314, 2312, 2313
NcoI CCATGG 1 cut(s) 1785
NdeII GATC 9 cut(s) 804, 899, 994, 1099, 1135, 1575, 1771, 1792, 2184
NlaIV GGNNCC 6 cut(s) 796, 1761, 1783, 1857, 1973, 2429
NmuCI GTSAC 4 cut(s) 763, 849, 1316, 1555
NsbI TGCGCA 1 cut(s) 681
NsiI ATGCAT 2 cut(s) 613, 2424
NspI RCATGY 3 cut(s) 886, 1082, 1556
NspV TTCGAA 2 cut(s) 890, 2332
OliI CACNNNNGTG 2 cut(s) 1323, 1779
PaeR7I CTCGAG 1 cut(s) 176
PagI TCATGA 1 cut(s) 2224
PciI ACATGT 1 cut(s) 882
PciSI GCTCTTC 1 cut(s) 879
PcsI WCGNNNNNNNCGW 1 cut(s) 1810
PctI GAATGC 2 cut(s) 636, 1270
PdmI GAANNNNTTC 1 cut(s) 2452
PfeI GAWTC 6 cut(s) 514, 749, 817, 937, 1355, 1423
PflFI GACNNNGTC 1 cut(s) 326
PfoI TCCNGGA 1 cut(s) 956
PkrI GCNGC 7 cut(s) 296, 673, 1219, 1612, 1933, 2078, 2194
PleI GAGTC 2 cut(s) 856, 2289
PpsI GAGTC 2 cut(s) 856, 2289
Ppu21I YACGTR 1 cut(s) 2160
PpuMI RGGWCCY 1 cut(s) 795
PscI ACATGT 1 cut(s) 882
PshAI GACNNNNGTC 1 cut(s) 1253
PsiI TTATAA 1 cut(s) 833
Psp124BI GAGCTC 3 cut(s) 8, 183, 204
Psp5II RGGWCCY 1 cut(s) 795
Psp6I CCWGG 4 cut(s) 695, 956, 1858, 2071
PspGI CCWGG 4 cut(s) 695, 956, 1858, 2071
PspN4I GGNNCC 6 cut(s) 796, 1761, 1783, 1857, 1973, 2429
PspPI GGNCC 2 cut(s) 744, 795
PspPPI RGGWCCY 1 cut(s) 795
PspXI VCTCGAGB 1 cut(s) 176
PsrI GAACNNNNNNTAC 2 cut(s) 224, 256
PstI CTGCAG 1 cut(s) 2081
PsuI RGATCY 3 cut(s) 899, 994, 1099
PsyI GACNNNGTC 1 cut(s) 326
RsaI GTAC 8 cut(s) 374, 452, 984, 1493, 1973, 2128, 2317, 2378
RsaNI GTAC 8 cut(s) 373, 451, 983, 1492, 1972, 2127, 2316, 2377
RseI CAYNNNNRTG 7 cut(s) 191, 825, 1083, 1323, 1672, 1779, 1908
SacI GAGCTC 3 cut(s) 8, 183, 204
SapI GCTCTTC 1 cut(s) 879
SaqAI TTAA 5 cut(s) 366, 858, 1238, 1313, 2093
SatI GCNGC 7 cut(s) 295, 672, 1218, 1611, 1932, 2077, 2193
Sau3AI GATC 9 cut(s) 804, 899, 994, 1099, 1135, 1575, 1771, 1792, 2184
Sau96I GGNCC 2 cut(s) 744, 795
SchI GAGTC 2 cut(s) 857, 2289
ScrFI CCNGG 7 cut(s) 314, 697, 958, 1860, 2073, 2312, 2313
SduI GDGCHC 6 cut(s) 8, 27, 183, 204, 252, 2061
SfaNI GCATC 8 cut(s) 388, 598, 714, 1017, 1308, 1320, 1836, 2431
SfcI CTRYAG 1 cut(s) 2077
Sfr274I CTCGAG 1 cut(s) 176
SfuI TTCGAA 2 cut(s) 890, 2332
SinI GGWCC 1 cut(s) 795
SlaI CTCGAG 1 cut(s) 176
SmaI CCCGGG 1 cut(s) 2313
SmiMI CAYNNNNRTG 7 cut(s) 191, 825, 1083, 1323, 1672, 1779, 1908
SmlI CTYRAG 4 cut(s) 176, 470, 1103, 2060
SmoI CTYRAG 4 cut(s) 176, 470, 1103, 2060
SnaBI TACGTA 1 cut(s) 2160
SpeI ACTAGT 1 cut(s) 2386
SsiI CCGC 4 cut(s) 870, 1108, 1513, 1686
SspI AATATT 1 cut(s) 1944
SspMI CTAG 3 cut(s) 72, 878, 2387
SstI GAGCTC 3 cut(s) 8, 183, 204
StyD4I CCNGG 7 cut(s) 312, 695, 956, 1858, 2071, 2310, 2311
StyI CCWWGG 3 cut(s) 798, 1147, 1785
TaaI ACNGT 6 cut(s) 236, 949, 1571, 1623, 1718, 1870
TaiI ACGT 3 cut(s) 348, 1411, 2162
TaqI TCGA 9 cut(s) 177, 321, 342, 815, 890, 920, 1578, 1804, 2332
TaqII GACCGA 1 cut(s) 906
TatI WGTACW 4 cut(s) 450, 982, 2126, 2376
TfiI GAWTC 6 cut(s) 514, 749, 817, 937, 1355, 1423
Tru1I TTAA 5 cut(s) 366, 858, 1238, 1313, 2093
Tru9I TTAA 5 cut(s) 366, 858, 1238, 1313, 2093
TscAI CASTG 6 cut(s) 27, 772, 777, 916, 1522, 2178
TseFI GTSAC 4 cut(s) 763, 849, 1316, 1555
TseI GCWGC 7 cut(s) 294, 671, 1217, 1610, 1931, 2076, 2192
Tsp45I GTSAC 4 cut(s) 763, 849, 1316, 1555
TspMI CCCGGG 1 cut(s) 2311
TspRI CASTG 6 cut(s) 27, 772, 777, 916, 1522, 2178
Tth111I GACNNNGTC 1 cut(s) 326
VpaK11BI GGWCC 1 cut(s) 795
XagI CCTNNNNNAGG 1 cut(s) 1962
XapI RAATTY 5 cut(s) 577, 961, 1171, 1899, 2215
XbaI TCTAGA 1 cut(s) 877
XceI RCATGY 3 cut(s) 886, 1082, 1556
XcmI CCANNNNNNNNNTGG 1 cut(s) 703
XhoI CTCGAG 1 cut(s) 176
XmaI CCCGGG 1 cut(s) 2311
XmiI GTMKAC 1 cut(s) 150
XmnI GAANNNNTTC 1 cut(s) 2452
XspI CTAG 3 cut(s) 72, 878, 2387
Zsp2I ATGCAT 2 cut(s) 613, 2424
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.