Rorug01G0279800
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
N/A
Physical Location & Seq
Reverse (-)
39284407 .. 39289408
5002 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0279800.1

Sequence Viewer

Length: 4821 bp
ATGGAGTTGGGAAGGTGGCTCAGACATGCTTATGCAATATCAATTGTGCTTCTTCTGCATATCAACGCTTCCTTATCCCTCGGCCACCACCGTGCTAACGTGACGGCAAGGTGCCTAGAGAGGGAGAGGGATGCACTGCTTGCTATCAAAGGAGACCTGGTGGATGAATACAACCTGCTCTCTTCGTGGGGAAGCGAAGCCAAAAGGCAAGACTGTTGCAGATGGGAAAGAGTCTACTGTGACCAGCTGACCGGCCATGTTACTCAACTTCATCTTGGAGGTGAGTTTCCATATTTCGCATCTTTTGAAGGTAAACTAAGTCCTAAAATCATTGAGTTGGAGCATTTGGAATATCTAGACCTCAGTCACAATAACTTAGATGAGAGCCAAATTCCACCAGCGCTCATTTGTTCTCTGTCCAATTTAAGACACCTAGATCTCCATTCCAATTTCCTCTTTGGGGGCAAAATTCTAGAGCTTATTGGTAACCTGACCAATTTAAGATATCTAGATCTCTCTGATGCTTTCTTTCTAGATGAAATTCCATATCTCAATCTCGGGAGGAACACCTCCCCCACTTATGGTGTTGTTCCTCCCGCCTCCACTTATGGTGTAGAAAACCTCCATTGGCTCCCCCATCTTTCTTCTTTAAAATACCTGGACCTGAGTTGGACCGATCTAAGTAAGGCTTCTGATTGGCTGGAAATAATAAACAAGCTCCCCAATTTAAGAAACTTGACCTTGAGCTTCTGTAGTCTTCCTCCTCCAACTCTTTCCACTCTTTCTCACATAAATTCTTCCAATTCTCTTGTTAGTGTTGATTTGTCTGGAAATCCTGCTGTCAGTTCTTCAATATTCAAATGGTTGTGCAACTACAATGCCACCCTTGTTCATCTTGACCTCTCTTCCACCCAATTAAGTGGTTTGATTCCCGATGCTTTCGCAAACATGGGCTCACTTGCATATCTTGGCCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGTTTTCAGAAACTTGAGCTCACTTGTAGACCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTCGCAAACATGAGCTCACTTAAATATCTTGGCCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGTTTTCAGAAACTTGAGCTCACTTGAAAATCTGTACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTCGCAAACATGGGCTCACTTGCATATCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTCGCAAACATGGGCTCACTTGCATATCTTGACCTCTCTTCCAACCAATTAAGTGGTTCGATTCCCGATGCTTTCGCAAACATGGGCTCACTTGCATATCTTGGCCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGTTTTCAGAAACTTGAGCTCACTTGAAAATCTGTACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTCGCAAACATGGGCTCACTTGCATATCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTCGCAAACATGGGCTCACTTGCATATCTTGACCTCTCTTCCAACCAATTAAGTGGTTCGATTCCCGATGCTTTCGCAAACATGGGCTCACTTGCATATCTTGGCCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGTTTTCAGAAACTTGAGCTCACTTAAATATCTTGGCCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTCGCAAACATGAGATCACTTAAATATCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCAATGCTTTCGCAAACATGAGCTCACTTGCAGATCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTCGCAAACATGGGCTCACTTGCATATCTGTACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTCGCAAACATGGGCTCACTTGCATATCTGTACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTCGCAAACATGAGCTCACTTGCATATCTTGACCTCTCTTCCAACCAATTAAGTGGTTCGATTCCCGATGTTTTCAGAAGCATGGGCTCACTTGCATATCGTGGCCTCTCTTCCAACCAATTAAGTGGTTCGATTCCCGATGTTTTCAGAAACATGGGCTCACTTGCAGAGCTTGACCTCTCTTCCAACCATTTAAGTGGCTTGACTCCTGATGCTTTCAGAAACATGGGCTCACTTGCAGAGCTTGACCTCTCTTCCAACCAATTAAGTGGCTTGACTCCCAATGCTTTCGCAAACATGAGCTCACTTGCAGAGCTTGACCTCTCTTCCAACCAATTAAGTGGCTTGACTCACGATGCTTTCGCAAACATGAGCTCACTTTCATCTCTTAACCTCTCTTCCAACCAATTAAGTGGTTTGATTCACGATGCTTTTGCAAACATGAGCTCACTTGCTCGTCTTGACATCTCTTATAACCCATTCGAAAGAGGGATCCCAGTATCCATTGGCCAGTTATGCAGTTTGCAACATGTGTCAGTTTTAGGTTGTAATCTGACAAGTGGACAACTTTCTGAGTTTGTTCAAGGATGTTCAGCATGTATTCAAAACTCATTACAGAGTTTTGATCTTTCCAATAATCATCTTGCTGGGTCACTTCCTAATCTTACAAGCTTTTCATCATTGGAGGTATTAACTCTCTCCAAAAATAAGTTGAGTGTTCTGGATAGTATTGGAAATTTTTCTTCTCTGAAAGAATTATATGTTGATCAAAATCAATTACGATGGATGATACCGGAAAGTATTGGGAAACTCTCCGGTTTGTATGTCTTGGATCTCTCTGGAAATCTTCTGAGCGGAAGAATTCCAGAAGGTATTGGGCAACTCTCATCATTGACAGAATTAATTCTTTCTGGAAATCAATTAAACAGAAGCATACCTGAAACTATTGGGCAACTATCATCTTTGCGAAGTTTAGATCTCTCTGGAAATCTGTTAAGCGGAAGAATACCGAAAAGTATTGGACAGTTGTCGAGGTTGTTCCATATAAATCTTAGTATGAATCATTTGGCGGGGGTGATTTCGGAAACTCATTTCTCAAAACTCTTCAATTTATATGAGTTGGATTTATCCTATAACTCATTATTAGAATTCAATGTCACTTCTGATTGGGTTCCTCCTTTCCAATTGTCTTATCTAAGTTTGAGGTCTTGTAAGGTGGGGCCGGATTTCCCAAAATGGCTTCGAACCCAAAAAGATCTTTCCTACCTTGACATGTCTGATGGTGACATTTCAGATGTCCTTCCAAGTTGGTTCTGGGGTCTATTTCGTGACGGTTCGACTATAGATCTGTCTAACAATCAAATTAGAGGAACATTAGGGAGTTCAGAGGTTGTATCATTAAGCGGAGTTGAAGTTCGATTTAGTTCGAACCAGTTGGAAGGTCCAATACCCTCATTTCTATCAAAAGCGTCATATTTGGATCTCTCTGATAATAAATTTTCAGAGGTGACTTCCTTCTTGTGTTCATCGAATGTTAAAATTTCCAGATTTCTTGATCTCTCCAGTAACCATATTTTTGGGGAACTTCCAGACTGCTGGGGACATTGGGTCAATCTCGAACTTCTTGATTTGAGTAACAATTCTTTTTCTGGTAAAATCCCACCCAATATAGGATGTTTACTTCGAATCAAAACATTGAAATTAAGGAGCAACAGACTTGTGGGAGAATTGCCTACATCCTTGAAGAATTGTACAAGCTTAAATGTTATTGATCTTGGGAACAATAAGCTTTCAAGTTCAGTGCCTGAATGGTTAGGGGTCTGCCTTACAAATTTGGTTATTCTCATGCTTCAATTTAATCAGTTTAGTGGAAGTTTGCCTTCACAATTATGCCATCTAGCACACCTTCAAATTCTGGATGTCTCTGTGAATGAAATCTCTGGAACTATACCAAAATGCCTCGATAATTTGTCTTCTTTGGCGCAAGAAGGAAATTCAAATCTAACCATCAGACATTCTTTTAATAAATCTGAGGCCGAAGCACCTTCGGGTAGTTCTCTTTATTATGAGGATGATGCAACCTTCATGTGGAAAGGAACGTTGTCTTCATACAAAAGTACTTTGGGACTGGTCAAGAGAATTGATCTCTCAAGCAACAGCTTAACTGGGGAGATTCCAAGTGAAATCACTCATCTTGTTGGGTTGGTTTCTCTGAACCTTTCGAGGAACAATTTATCTGGAAAAATACCTCTAGAGATCGGAAAGTTGAAGTCACTAGATTCTCTTGATTTGTCTAGAAACAAGATAGGTGGCGGGATTCCGACAAGCCTTGCTCGGATTGATAGACTTACTGACATGGATTTGTCATATAACAACTTGTCTGGTGAAATTCCAACTGGTACTCAGCTCCAGAGCTTTGATCCCTCCTTTTATGCTGGAAATCCTCAATTGTGTGGACTTCCACTTGAAGTTTGTAATCCAGAGGGAACTGGTCGGCCAAATGTCTCGAGTGATCAAGAAGATCCAGATGAGCTCATCACACCGGGCTTTTACATAAGTCTGGGACTTGGATTTGCTGTTGGATTCTGGGTTGTCTGTGGGAGCTTGATATTCAAGCGGTCATGGAGATATGCATACTACAACTTCTTGAATGCTTCAAATGATTGGCTTTATGTGAGGGTAGCTTTGATCAGACGGCAATTGAAGGATATGCTTAGTGGACAATCTTAA
Functional Annotation

Protein Analysis

1606

Amino Acids

174.43

Weight (kDa)

4.91

Isoelectric Point (pI)

33.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 40 - 81 1.3e-07 Leucine rich repeat N-terminal domain
LRR_8 PF13855 291 - 330 5.3e-06 Leucine rich repeat
LRR_8 PF13855 295 - 354 3.9e-12 Leucine rich repeat
LRR_14 PF23598 306 - 400 4.6e-06 Leucine-rich repeat region
LRR_5 PF13306 312 - 437 2.2e-06 BspA type Leucine rich repeat region (6 copies)
LRR_8 PF13855 323 - 378 3.1e-13 Leucine rich repeat
LRR_8 PF13855 343 - 402 3.7e-14 Leucine rich repeat
LRR_8 PF13855 368 - 426 3.8e-14 Leucine rich repeat
LRR_8 PF13855 391 - 450 7.8e-16 Leucine rich repeat
LRR_5 PF13306 408 - 533 4.5e-06 BspA type Leucine rich repeat region (6 copies)
LRR_8 PF13855 419 - 474 8.6e-13 Leucine rich repeat
LRR_8 PF13855 455 - 498 3.5e-09 Leucine rich repeat
LRR_8 PF13855 487 - 546 9.3e-16 Leucine rich repeat
LRR_5 PF13306 504 - 631 3.2e-06 BspA type Leucine rich repeat region (6 copies)
LRR_8 PF13855 512 - 570 9.1e-14 Leucine rich repeat
LRR_8 PF13855 551 - 594 3e-09 Leucine rich repeat
LRR_5 PF13306 552 - 676 1.6e-07 BspA type Leucine rich repeat region (6 copies)
LRR_8 PF13855 559 - 618 3.3e-15 Leucine rich repeat
LRR_14 PF23598 579 - 680 4.2e-06 Leucine-rich repeat region
LRR_8 PF13855 587 - 642 7.7e-14 Leucine rich repeat
LRR_8 PF13855 612 - 666 6e-13 Leucine rich repeat
LRR_8 PF13855 632 - 690 8.6e-15 Leucine rich repeat
LRR_8 PF13855 661 - 714 2.7e-13 Leucine rich repeat
LRR_8 PF13855 679 - 738 2e-11 Leucine rich repeat
LRR_5 PF13306 745 - 853 6.1e-10 BspA type Leucine rich repeat region (6 copies)
LRR_8 PF13855 751 - 810 1.9e-16 Leucine rich repeat
LRR_8 PF13855 799 - 857 3.1e-13 Leucine rich repeat
LRR_14 PF23598 914 - 1122 1.2e-20 Leucine-rich repeat region
LRR_8 PF13855 946 - 1005 1.4e-08 Leucine rich repeat
LRR_14 PF23598 1190 - 1344 3.9e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2565
Acc36I ACCTGC 1 cut(s) 183
AccB1I GGYRCC 1 cut(s) 111
AccBSI CCGCTC 1 cut(s) 2946
AccI GTMKAC 2 cut(s) 234, 1035
AciI CCGC 7 cut(s) 597, 2946, 3090, 3161, 3495, 4404, 4708
AclI AACGTT 1 cut(s) 4190
AclWI GGATC 6 cut(s) 2578, 2591, 2931, 3579, 4505, 4607
AcoI YGGCCR 4 cut(s) 82, 253, 2599, 4586
AfaI GTAC 7 cut(s) 1187, 1475, 1979, 2051, 3844, 4210, 4492
AfeI AGCGCT 1 cut(s) 402
AfiI CCNNNNNNNGG 5 cut(s) 121, 460, 581, 3761, 4179
AflIII ACRYGT 2 cut(s) 2620, 3363
AhdI GACNNNNNGTC 1 cut(s) 3698
AjnI CCWGG 2 cut(s) 156, 657
AleI CACNNNNGTG 1 cut(s) 90
AloI GAACNNNNNNTCC 2 cut(s) 3489, 3521
Alw26I GTCTC 3 cut(s) 147, 4018, 4600
AlwI GGATC 6 cut(s) 2578, 2591, 2931, 3579, 4505, 4607
AlwNI CAGNNNCTG 1 cut(s) 3896
Ama87I CYCGRG 2 cut(s) 557, 4597
Aor51HI AGCGCT 1 cut(s) 402
AseI ATTAAT 1 cut(s) 2993
Asp700I GAANNNNTTC 2 cut(s) 2830, 2994
AspLEI GCGC 2 cut(s) 403, 4075
AspS9I GGNCC 4 cut(s) 661, 672, 3311, 3533
AsuC2I CCSGG 1 cut(s) 4635
AsuHPI GGTGA 5 cut(s) 293, 3178, 3386, 3610, 4487
AsuII TTCGAA 4 cut(s) 2574, 3334, 3518, 3775
AvaI CYCGRG 2 cut(s) 557, 4597
AvaII GGWCC 3 cut(s) 661, 672, 3533
BalI TGGCCA 1 cut(s) 2601
BamHI GGATCC 1 cut(s) 2583
BanI GGYRCC 1 cut(s) 111
BarI GAAGNNNNNNTAC 2 cut(s) 3522, 3554
BbsI GAAGAC 3 cut(s) 749, 4056, 4188
BccI CCATC 6 cut(s) 216, 645, 2868, 3365, 3993, 4106
BceAI ACGGC 2 cut(s) 120, 4802
BcgI CGANNNNNNTGC 2 cut(s) 2507, 2541
BciT130I CCWGG 2 cut(s) 158, 659
BciVI GTATCC 1 cut(s) 2602
BclI TGATCA 3 cut(s) 2857, 4603, 4779
BcnI CCSGG 1 cut(s) 4635
BcoDI GTCTC 3 cut(s) 147, 4018, 4600
BfmI CTRYAG 2 cut(s) 751, 3432
BfoI RGCGCY 1 cut(s) 404
BfuAI ACCTGC 1 cut(s) 183
BfuI GTATCC 1 cut(s) 2602
BglII AGATCT 6 cut(s) 436, 511, 1900, 3067, 3346, 3436
BmcAI AGTACT 1 cut(s) 4210
Bme1390I CCNGG 3 cut(s) 158, 659, 4635
Bme18I GGWCC 3 cut(s) 661, 672, 3533
BmeRI GACNNNNNGTC 1 cut(s) 3698
BmeT110I CYCGRG 2 cut(s) 557, 4597
BmgT120I GGNCC 4 cut(s) 661, 672, 3311, 3533
BmiI GGNNCC 5 cut(s) 113, 632, 2585, 3264, 3312
BmrFI CCNGG 3 cut(s) 158, 659, 4635
BmrI ACTGGG 2 cut(s) 2582, 4266
BmuI ACTGGG 2 cut(s) 2582, 4266
BoxI GACNNNNGTC 2 cut(s) 363, 3118
BpiI GAAGAC 3 cut(s) 749, 4056, 4188
BpmI CTGGAG 2 cut(s) 3637, 4484
Bpu14I TTCGAA 4 cut(s) 2574, 3334, 3518, 3775
BpuEI CTTGAG 6 cut(s) 763, 1042, 1186, 1474, 1762, 4225
BpuMI CCSGG 1 cut(s) 4635
BsaBI GATNNNNATC 1 cut(s) 2862
BsaI GGTCTC 1 cut(s) 147
BsaJI CCNNGG 1 cut(s) 79
BsaWI WCCGGW 2 cut(s) 2884, 2906
BsaXI ACNNNNNCTCC 4 cut(s) 144, 174, 3489, 3519
Bsc4I CCNNNNNNNGG 5 cut(s) 121, 460, 581, 3761, 4179
Bse118I RCCGGY 1 cut(s) 251
Bse1I ACTGG 8 cut(s) 2588, 2602, 3523, 3654, 4224, 4261, 4492, 4585
Bse8I GATNNNNATC 1 cut(s) 2862
BseBI CCWGG 2 cut(s) 158, 659
BseDI CCNNGG 1 cut(s) 79
BseGI GGATG 8 cut(s) 136, 169, 2684, 2883, 3770, 3827, 4015, 4168
BseJI GATNNNNATC 1 cut(s) 2862
BseLI CCNNNNNNNGG 5 cut(s) 121, 460, 581, 3761, 4179
BseMII CTCAG 7 cut(s) 34, 376, 656, 2655, 2933, 4113, 4508
BseNI ACTGG 8 cut(s) 2588, 2602, 3523, 3654, 4224, 4261, 4492, 4585
BseRI GAGGAG 1 cut(s) 753
BseYI CCCAGC 2 cut(s) 2738, 3687
BshNI GGYRCC 1 cut(s) 111
BsiHKCI CYCGRG 2 cut(s) 557, 4597
BsiSI CCGG 5 cut(s) 252, 2885, 2907, 3314, 4634
BslFI GGGAC 3 cut(s) 3705, 4230, 4668
BslI CCNNNNNNNGG 5 cut(s) 121, 460, 581, 3761, 4179
BsmAI GTCTC 3 cut(s) 147, 4018, 4600
BsmFI GGGAC 3 cut(s) 3705, 4230, 4668
BsmI GAATGC 1 cut(s) 4747
Bso31I GGTCTC 1 cut(s) 147
BsoBI CYCGRG 2 cut(s) 557, 4597
Bsp119I TTCGAA 4 cut(s) 2574, 3334, 3518, 3775
Bsp1407I TGTACA 1 cut(s) 3842
BspACI CCGC 7 cut(s) 597, 2946, 3090, 3161, 3495, 4404, 4708
BspCNI CTCAG 7 cut(s) 33, 375, 657, 2656, 2934, 4114, 4507
BspLI GGNNCC 5 cut(s) 113, 632, 2585, 3264, 3312
BspMI ACCTGC 1 cut(s) 183
BspPI GGATC 6 cut(s) 2578, 2591, 2931, 3579, 4505, 4607
BspT104I TTCGAA 4 cut(s) 2574, 3334, 3518, 3775
BspT107I GGYRCC 1 cut(s) 111
BspTNI GGTCTC 1 cut(s) 147
BsrBI CCGCTC 1 cut(s) 2946
BsrFI RCCGGY 1 cut(s) 251
BsrGI TGTACA 1 cut(s) 3842
BsrI ACTGG 8 cut(s) 2588, 2602, 3523, 3654, 4224, 4261, 4492, 4585
BssAI RCCGGY 1 cut(s) 251
BssECI CCNNGG 1 cut(s) 79
Bst2UI CCWGG 2 cut(s) 158, 659
Bst4CI ACNGT 5 cut(s) 92, 215, 239, 3117, 3425
BstAPI GCANNNNNTGC 1 cut(s) 140
BstAUI TGTACA 1 cut(s) 3842
BstBI TTCGAA 4 cut(s) 2574, 3334, 3518, 3775
BstC8I GCNNGC 1 cut(s) 141
BstEII GGTNACC 1 cut(s) 485
BstF5I GGATG 8 cut(s) 136, 169, 2684, 2883, 3770, 3827, 4015, 4168
BstH2I RGCGCY 1 cut(s) 404
BstHHI GCGC 2 cut(s) 403, 4075
BstMAI GTCTC 3 cut(s) 147, 4018, 4600
BstMWI GCNNNNNNNGC 3 cut(s) 55, 140, 2607
BstNI CCWGG 2 cut(s) 158, 659
BstNSI RCATGY 4 cut(s) 29, 2624, 2691, 3367
BstPAI GACNNNNGTC 2 cut(s) 363, 3118
BstPI GGTNACC 1 cut(s) 485
BstSCI CCNGG 3 cut(s) 156, 657, 4633
BstSFI CTRYAG 2 cut(s) 751, 3432
BstV2I GAAGAC 3 cut(s) 749, 4056, 4188
BsuI GTATCC 1 cut(s) 2602
BtsCI GGATG 8 cut(s) 136, 169, 2684, 2883, 3770, 3827, 4015, 4168
BtsI GCAGTG 1 cut(s) 134
BtsIMutI CAGTG 2 cut(s) 134, 3897
BveI ACCTGC 1 cut(s) 183
Cac8I GCNNGC 1 cut(s) 141
CaiI CAGNNNCTG 1 cut(s) 3896
CfoI GCGC 2 cut(s) 403, 4075
Cfr10I RCCGGY 1 cut(s) 251
Cfr13I GGNCC 4 cut(s) 661, 672, 3311, 3533
CseI GACGC 1 cut(s) 3549
CsiI ACCWGGT 1 cut(s) 156
Csp6I GTAC 7 cut(s) 1186, 1474, 1978, 2050, 3843, 4209, 4491
CspCI CAANNNNNGTGG 2 cut(s) 4381, 4416
CviQI GTAC 7 cut(s) 1186, 1474, 1978, 2050, 3843, 4209, 4491
DraI TTTAAA 1 cut(s) 651
DriI GACNNNNNGTC 1 cut(s) 3698
EaeI YGGCCR 4 cut(s) 82, 253, 2599, 4586
Eam1105I GACNNNNNGTC 1 cut(s) 3698
Eco31I GGTCTC 1 cut(s) 147
Eco32I GATATC 1 cut(s) 506
Eco47I GGWCC 3 cut(s) 661, 672, 3533
Eco47III AGCGCT 1 cut(s) 402
Eco88I CYCGRG 2 cut(s) 557, 4597
Eco91I GGTNACC 1 cut(s) 485
EcoO65I GGTNACC 1 cut(s) 485
EcoRI GAATTC 2 cut(s) 2952, 3239
EcoRII CCWGG 2 cut(s) 156, 657
EcoRV GATATC 1 cut(s) 506
EcoT22I ATGCAT 1 cut(s) 4726
FalI AAGNNNNNCTT 4 cut(s) 673, 705, 3955, 3987
FaqI GGGAC 3 cut(s) 3705, 4230, 4668
FauI CCCGC 3 cut(s) 604, 3154, 4397
FbaI TGATCA 3 cut(s) 2857, 4603, 4779
FblI GTMKAC 2 cut(s) 234, 1035
FokI GGATG 8 cut(s) 143, 176, 2691, 2890, 3777, 3814, 4022, 4175
GlaI GCGC 2 cut(s) 402, 4074
GsaI CCCAGC 2 cut(s) 2742, 3691
GsuI CTGGAG 2 cut(s) 3637, 4484
HaeII RGCGCY 1 cut(s) 404
HapII CCGG 5 cut(s) 252, 2885, 2907, 3314, 4634
HgaI GACGC 1 cut(s) 3549
HhaI GCGC 2 cut(s) 403, 4075
Hin6I GCGC 2 cut(s) 401, 4073
HinP1I GCGC 2 cut(s) 401, 4073
HindIII AAGCTT 3 cut(s) 2761, 3847, 3878
HpaII CCGG 5 cut(s) 252, 2885, 2907, 3314, 4634
HphI GGTGA 5 cut(s) 293, 3178, 3386, 3610, 4487
Hpy166II GTNNAC 7 cut(s) 235, 314, 1036, 2654, 3770, 4547, 4811
Hpy8I GTNNAC 7 cut(s) 235, 314, 1036, 2654, 3770, 4547, 4811
HpyCH4III ACNGT 5 cut(s) 92, 215, 239, 3117, 3425
HpyCH4IV ACGT 2 cut(s) 99, 4190
HpyF10VI GCNNNNNNNGC 3 cut(s) 55, 140, 2607
HpySE526I ACGT 2 cut(s) 99, 4190
HspAI GCGC 2 cut(s) 401, 4073
Ksp22I TGATCA 3 cut(s) 2857, 4603, 4779
LmnI GCTCC 6 cut(s) 340, 636, 723, 3798, 4503, 4692
MabI ACCWGGT 1 cut(s) 156
MaeII ACGT 2 cut(s) 99, 4190
MbiI CCGCTC 1 cut(s) 2946
MfeI CAATTG 4 cut(s) 42, 3275, 4538, 4790
MlsI TGGCCA 1 cut(s) 2601
MluNI TGGCCA 1 cut(s) 2601
MlyI GAGTC 4 cut(s) 240, 2290, 2362, 2434
Mox20I TGGCCA 1 cut(s) 2601
Mph1103I ATGCAT 1 cut(s) 4726
MroXI GAANNNNTTC 2 cut(s) 2830, 2994
MscI TGGCCA 1 cut(s) 2601
MslI CAYNNNNRTG 4 cut(s) 30, 90, 2286, 3979
Msp20I TGGCCA 1 cut(s) 2601
MspA1I CMGCKG 1 cut(s) 247
MspI CCGG 5 cut(s) 252, 2885, 2907, 3314, 4634
MspR9I CCNGG 3 cut(s) 158, 659, 4635
MunI CAATTG 4 cut(s) 42, 3275, 4538, 4790
Mva1269I GAATGC 1 cut(s) 4747
MvaI CCWGG 2 cut(s) 158, 659
MwoI GCNNNNNNNGC 3 cut(s) 55, 140, 2607
NciI CCSGG 1 cut(s) 4635
NlaIV GGNNCC 5 cut(s) 113, 632, 2585, 3264, 3312
NmeAIII GCCGAG 1 cut(s) 60
NmuCI GTSAC 9 cut(s) 100, 239, 365, 2742, 3247, 3374, 3419, 3598, 4362
NsiI ATGCAT 1 cut(s) 4726
NspI RCATGY 4 cut(s) 29, 2624, 2691, 3367
NspV TTCGAA 4 cut(s) 2574, 3334, 3518, 3775
OliI CACNNNNGTG 1 cut(s) 90
PaeR7I CTCGAG 1 cut(s) 4597
PciI ACATGT 2 cut(s) 2620, 3363
PctI GAATGC 1 cut(s) 4747
PdmI GAANNNNTTC 2 cut(s) 2830, 2994
PleI GAGTC 4 cut(s) 239, 2290, 2362, 2434
PpsI GAGTC 4 cut(s) 239, 2290, 2362, 2434
PscI ACATGT 2 cut(s) 2620, 3363
PshAI GACNNNNGTC 2 cut(s) 363, 3118
PshBI ATTAAT 1 cut(s) 2993
PsiI TTATAA 1 cut(s) 2565
Psp1406I AACGTT 1 cut(s) 4190
Psp6I CCWGG 2 cut(s) 156, 657
PspEI GGTNACC 1 cut(s) 485
PspFI CCCAGC 2 cut(s) 2738, 3687
PspGI CCWGG 2 cut(s) 156, 657
PspN4I GGNNCC 5 cut(s) 113, 632, 2585, 3264, 3312
PspPI GGNCC 4 cut(s) 661, 672, 3311, 3533
PstNI CAGNNNCTG 1 cut(s) 3896
PvuII CAGCTG 1 cut(s) 247
RsaI GTAC 7 cut(s) 1187, 1475, 1979, 2051, 3844, 4210, 4492
RsaNI GTAC 7 cut(s) 1186, 1474, 1978, 2050, 3843, 4209, 4491
RseI CAYNNNNRTG 4 cut(s) 30, 90, 2286, 3979
Sau96I GGNCC 4 cut(s) 661, 672, 3311, 3533
ScaI AGTACT 1 cut(s) 4210
SchI GAGTC 4 cut(s) 240, 2290, 2362, 2434
ScrFI CCNGG 3 cut(s) 158, 659, 4635
SexAI ACCWGGT 1 cut(s) 156
SfcI CTRYAG 2 cut(s) 751, 3432
Sfr274I CTCGAG 1 cut(s) 4597
SfuI TTCGAA 4 cut(s) 2574, 3334, 3518, 3775
SinI GGWCC 3 cut(s) 661, 672, 3533
SlaI CTCGAG 1 cut(s) 4597
SmiMI CAYNNNNRTG 4 cut(s) 30, 90, 2286, 3979
SmlI CTYRAG 7 cut(s) 742, 1021, 1165, 1453, 1741, 4240, 4597
SmoI CTYRAG 7 cut(s) 742, 1021, 1165, 1453, 1741, 4240, 4597
SsiI CCGC 7 cut(s) 597, 2946, 3090, 3161, 3495, 4404, 4708
SspI AATATT 1 cut(s) 855
StyD4I CCNGG 3 cut(s) 156, 657, 4633
TaaI ACNGT 5 cut(s) 92, 215, 239, 3117, 3425
TaiI ACGT 2 cut(s) 102, 4193
TaqII GACCGA 1 cut(s) 689
TatI WGTACW 2 cut(s) 3842, 4208
TscAI CASTG 2 cut(s) 141, 3897
TseFI GTSAC 9 cut(s) 100, 239, 365, 2742, 3247, 3374, 3419, 3598, 4362
Tsp45I GTSAC 9 cut(s) 100, 239, 365, 2742, 3247, 3374, 3419, 3598, 4362
TspRI CASTG 2 cut(s) 141, 3897
VpaK11BI GGWCC 3 cut(s) 661, 672, 3533
VspI ATTAAT 1 cut(s) 2993
XbaI TCTAGA 6 cut(s) 355, 472, 508, 532, 4342, 4385
XceI RCATGY 4 cut(s) 29, 2624, 2691, 3367
XcmI CCANNNNNNNNNTGG 1 cut(s) 3402
XhoI CTCGAG 1 cut(s) 4597
XmiI GTMKAC 2 cut(s) 234, 1035
XmnI GAANNNNTTC 2 cut(s) 2830, 2994
ZrmI AGTACT 1 cut(s) 4210
Zsp2I ATGCAT 1 cut(s) 4726
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.