Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

60034062 .. 60037015

Gene Structure 2954 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0478500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1581 bp

ATGGGCCAGTCAGCTTCGGCGGCAGCAATTCCAAGCCGCCGTGAAAACAATCACAGACATCGATCTAAGTCCAAAGCAACGGCCCTGATCTCCCCGATGCTAGCCGCGGATGAGGTCGTTGAGTCAGTAACCGACTACATCTCCGATCTGCCGGATGAATGCTTGGCTTGCATTTTCCAGTCACTCGGCTCCGGCGACCGGAAAAGATGCTCTCTGGTCTGCCGGCGGTGGCTGACGGTCGAGGGACAGAGCCGTCACCGCCTCTCCCTCAACGCGCACGCGGATCTACAGCCCGTCATCCTTTCCCTCTTCTCTCGGTTCGACGCCGTCACCAAACTCGCTCTGAAATGCGACCGCAGAGCCACCAGCATCGGCGACGAGGCGCTCGCTCTCATCTCGCTGCGGTGCCGGAACCTCACGCGCCTGAAGCTGCGCGCGTGCCGCGAGTTGACCGACGCAGGCATGCTGGCGTTTGCGAAAAACTGCAAGGCTTTGAAGAAGCTCTCCTGTGGATCGTGCACCTTCGGAGCCAAGGGAATGAACGCCGTGCTGGAGAATTGCTCGGCGCTGGAAGAGTTATCGGTGAAGCGGCTCCGTGGTATTGGGCCGGACGGTTCCGCAGTGGAGCCCATTGGGCCGGGCGTCGCTGCCTCGTCGCTCAAGACGATTTGCCTGAAAGAGCTTTACAATGGACAGTGTTTCGGGCCGCTTATAATCGGCGCAAAGAATCTGAGGACTCTGAAGCTTTTCAGGTGCGGTGGGGATTGGGATAAGCTTCTTCAAGTGATAGCAGAGCGAGTCACGTCTATGGTTGAAATCCATCTGGAAAAGCTTCAGGTTAGCGACGTTGCGCTGGCCGCAATCTCCAATTGCTTGGATCTGGAAATTTTACACCTGGTCAAAACGCCGGACTGCACAAATGTAGGTCTGATTTCGGTCTCGGAACGCTGCAAGCTCTTGAGGAAGCTTCACATTGACGGCTGGAAGTCAAACCGTGTGGGAGATGAAGGCTTGATTTCGGTGGCCAAGAGTTGCCCCAACCTTCAGGAATTGGTTCTTATCGGCGTGAATCCAACCAAAGCGAGCTTGGAAACGTTGGCGGCAAATTGCCCCAATCTGGAGAGGTTGGCATTGTGCGGGAGTGATACAGTAGGCGATCCGGAGCTTTTGTGCATTGCTGCGAAATGTGGAGCATTGAAGAAGCTTTGCATTAAGAGCTGCCCTGTGTCTGATGTTGGCCTCGAAGGACTGGCCAGTGGGTGCCCTAATATGGTGAAAGTGAAGGTTAAGAAGTGTAGGCTAGTAACACCCGAGGGTGCTGATTCTTTGAGGGCAAAGAGGCCTACATTGGCTGTGAATTTGGACACCGGTGAGCCTCCACAAGACGCCAGTGCCAGTGACGGAGGGGCACAAGATAACCCTGCTGTCGAATTCCTTCCGCTGGCCACACAACCAGTGTTTCCTGACATTGCTTCAAGCAGTACAGGGAGGTCTGCGTCCTTTAAGTCAAGGTTAAGCCTTTTATCTGGAAGGACCCTTGTGGCTTGCACTCTGAGAAGGTGGGTAAGTCGGAATAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

526

Amino Acids

56.34

Weight (kDa)

8.96

Isoelectric Point (pI)

45.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box	PF00646	47 - 78	7.5e-08	F-box domain
F-box-like	PF12937	47 - 78	2.2e-07	F-box-like
LRR_At5g56370	PF24758	316 - 382	2.2e-06	FBD-associated F-box protein At5g56370, LRR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	713
AasI	GACNNNNNNGTC	1 cut(s)	252
AccB1I	GGYRCC	2 cut(s)	405, 1260
AccII	CGCG	7 cut(s)	107, 275, 281, 421, 435, 437, 444
AccIII	TCCGGA	1 cut(s)	1159
AclI	AACGTT	1 cut(s)	1094
AclWI	GGATC	4 cut(s)	291, 520, 885, 1151
AcoI	YGGCCR	4 cut(s)	855, 1023, 1251, 1443
AcsI	RAATTY	3 cut(s)	885, 1357, 1430
AcuI	CTGAAG	4 cut(s)	446, 761, 818, 1028
AcyI	GRCGYC	3 cut(s)	324, 642, 1386
AfaI	GTAC	1 cut(s)	1483
AfiI	CCNNNNNNNGG	4 cut(s)	198, 1117, 1270, 1441
AgeI	ACCGGT	1 cut(s)	1367
AgsI	TTSAA	5 cut(s)	496, 782, 815, 1198, 1476
AjiI	CACGTC	1 cut(s)	804
AjnI	CCWGG	1 cut(s)	894
Alw21I	GWGCWC	1 cut(s)	521
Alw26I	GTCTC	1 cut(s)	943
Alw44I	GTGCAC	1 cut(s)	517
AlwI	GGATC	4 cut(s)	291, 520, 885, 1151
Ama87I	CYCGRG	1 cut(s)	1310
Aor13HI	TCCGGA	1 cut(s)	1159
ApaLI	GTGCAC	1 cut(s)	517
ApeKI	GCWGC	7 cut(s)	23, 400, 430, 647, 948, 1178, 1218
ApoI	RAATTY	3 cut(s)	885, 1357, 1430
AsiGI	ACCGGT	1 cut(s)	1367
Asp700I	GAANNNNTTC	4 cut(s)	746, 831, 1053, 1434
AspLEI	GCGC	8 cut(s)	277, 385, 423, 435, 437, 568, 722, 853
AspS9I	GGNCC	6 cut(s)	4, 82, 605, 635, 704, 1533
AsuC2I	CCSGG	1 cut(s)	639
AsuHPI	GGTGA	5 cut(s)	248, 322, 595, 1285, 1382
AsuNHI	GCTAGC	1 cut(s)	100
AvaI	CYCGRG	1 cut(s)	1310
AvaII	GGWCC	1 cut(s)	1533
BaeGI	GKGCMC	3 cut(s)	521, 1265, 1411
BalI	TGGCCA	3 cut(s)	1025, 1253, 1445
BanI	GGYRCC	2 cut(s)	405, 1260
BanII	GRGCYC	1 cut(s)	630
Bbv12I	GWGCWC	1 cut(s)	521
BbvI	GCAGC	7 cut(s)	35, 387, 417, 634, 935, 1165, 1205
BccI	CCATC	1 cut(s)	828
BceAI	ACGGC	6 cut(s)	24, 96, 237, 311, 530, 994
BciT130I	CCWGG	1 cut(s)	896
BcnI	CCSGG	1 cut(s)	639
BcoDI	GTCTC	1 cut(s)	943
BfaI	CTAG	2 cut(s)	101, 1301
BfmI	CTRYAG	1 cut(s)	287
BfoI	RGCGCY	2 cut(s)	386, 569
BglI	GCCNNNNNGGC	1 cut(s)	634
Bme1390I	CCNGG	2 cut(s)	639, 896
Bme18I	GGWCC	1 cut(s)	1533
BmeT110I	CYCGRG	1 cut(s)	1310
BmgBI	CACGTC	1 cut(s)	804
BmgT120I	GGNCC	6 cut(s)	4, 82, 605, 635, 704, 1533
BmiI	GGNNCC	9 cut(s)	190, 407, 413, 529, 593, 616, 627, 1262, 1535
BmrFI	CCNGG	2 cut(s)	639, 896
BmsI	GCATC	3 cut(s)	87, 197, 378
BmtI	GCTAGC	1 cut(s)	104
BplI	GAGNNNNNCTC	2 cut(s)	545, 577
BpmI	CTGGAG	2 cut(s)	572, 1139
BpuEI	CTTGAG	2 cut(s)	644, 979
BpuMI	CCSGG	1 cut(s)	639
Bsa29I	ATCGAT	1 cut(s)	61
BsaHI	GRCGYC	3 cut(s)	324, 642, 1386
BsaI	GGTCTC	1 cut(s)	943
BsaJI	CCNNGG	4 cut(s)	105, 531, 595, 1311
BsaWI	WCCGGW	3 cut(s)	198, 1159, 1367
BsaXI	ACNNNNNCTCC	6 cut(s)	125, 155, 248, 278, 1154, 1184
Bsc4I	CCNNNNNNNGG	4 cut(s)	198, 1117, 1270, 1441
Bse118I	RCCGGY	2 cut(s)	222, 1367
Bse1I	ACTGG	7 cut(s)	7, 178, 1254, 1254, 1389, 1395, 1454
Bse3DI	GCAATG	2 cut(s)	1173, 1467
BseAI	TCCGGA	1 cut(s)	1159
BseBI	CCWGG	1 cut(s)	896
BseCI	ATCGAT	1 cut(s)	61
BseDI	CCNNGG	4 cut(s)	105, 531, 595, 1311
BseGI	GGATG	3 cut(s)	115, 160, 297
BseLI	CCNNNNNNNGG	4 cut(s)	198, 1117, 1270, 1441
BseMI	GCAATG	2 cut(s)	1173, 1467
BseMII	CTCAG	2 cut(s)	722, 1544
BseNI	ACTGG	7 cut(s)	7, 178, 1254, 1254, 1389, 1395, 1454
BsePI	GCGCGC	1 cut(s)	433
BseSI	GKGCMC	3 cut(s)	521, 1265, 1411
BseXI	GCAGC	7 cut(s)	35, 387, 417, 634, 935, 1165, 1205
BsgI	GTGCAG	1 cut(s)	898
Bsh1236I	CGCG	7 cut(s)	107, 275, 281, 421, 435, 437, 444
Bsh1285I	CGRYCG	3 cut(s)	199, 240, 355
BshNI	GGYRCC	2 cut(s)	405, 1260
BshTI	ACCGGT	1 cut(s)	1367
BshVI	ATCGAT	1 cut(s)	61
BsiEI	CGRYCG	3 cut(s)	199, 240, 355
BsiHKAI	GWGCWC	1 cut(s)	521
BsiHKCI	CYCGRG	1 cut(s)	1310
BslFI	GGGAC	1 cut(s)	258
BslI	CCNNNNNNNGG	4 cut(s)	198, 1117, 1270, 1441
BsmAI	GTCTC	1 cut(s)	943
BsmFI	GGGAC	1 cut(s)	258
BsmI	GAATGC	1 cut(s)	164
Bso31I	GGTCTC	1 cut(s)	943
BsoBI	CYCGRG	1 cut(s)	1310
Bsp1286I	GDGCHC	4 cut(s)	521, 630, 1265, 1411
Bsp13I	TCCGGA	1 cut(s)	1159
Bsp143I	GATC	7 cut(s)	62, 87, 145, 283, 512, 877, 1156
BspCNI	CTCAG	2 cut(s)	723, 1545
BspDI	ATCGAT	1 cut(s)	61
BspEI	TCCGGA	1 cut(s)	1159
BspFNI	CGCG	7 cut(s)	107, 275, 281, 421, 435, 437, 444
BspLI	GGNNCC	9 cut(s)	190, 407, 413, 529, 593, 616, 627, 1262, 1535
BspOI	GCTAGC	1 cut(s)	104
BspPI	GGATC	4 cut(s)	291, 520, 885, 1151
BspT107I	GGYRCC	2 cut(s)	405, 1260
BspTNI	GGTCTC	1 cut(s)	943
BsrDI	GCAATG	2 cut(s)	1173, 1467
BsrFI	RCCGGY	2 cut(s)	222, 1367
BsrI	ACTGG	7 cut(s)	7, 178, 1254, 1254, 1389, 1395, 1454
BssAI	RCCGGY	2 cut(s)	222, 1367
BssECI	CCNNGG	4 cut(s)	105, 531, 595, 1311
BssHII	GCGCGC	1 cut(s)	433
BssMI	GATC	7 cut(s)	62, 87, 145, 283, 512, 877, 1156
BssNI	GRCGYC	3 cut(s)	324, 642, 1386
BssT1I	CCWWGG	1 cut(s)	531
Bst2UI	CCWGG	1 cut(s)	896
Bst4CI	ACNGT	5 cut(s)	238, 614, 696, 995, 1150
Bst6I	CTCTTC	2 cut(s)	314, 567
BstACI	GRCGYC	3 cut(s)	324, 642, 1386
BstDEI	CTNAG	3 cut(s)	66, 731, 1553
BstDSI	CCRYGG	2 cut(s)	105, 595
BstF5I	GGATG	3 cut(s)	115, 160, 297
BstFNI	CGCG	7 cut(s)	107, 275, 281, 421, 435, 437, 444
BstH2I	RGCGCY	2 cut(s)	386, 569
BstHHI	GCGC	8 cut(s)	277, 385, 423, 435, 437, 568, 722, 853
BstKTI	GATC	7 cut(s)	65, 90, 148, 286, 515, 880, 1159
BstMAI	GTCTC	1 cut(s)	943
BstMBI	GATC	7 cut(s)	62, 87, 145, 283, 512, 877, 1156
BstMCI	CGRYCG	3 cut(s)	199, 240, 355
BstMWI	GCNNNNNNNGC	8 cut(s)	20, 168, 258, 427, 441, 634, 857, 1215
BstNI	CCWGG	1 cut(s)	896
BstNSI	RCATGY	1 cut(s)	466
BstSCI	CCNGG	2 cut(s)	637, 894
BstSFI	CTRYAG	1 cut(s)	287
BstSLI	GKGCMC	3 cut(s)	521, 1265, 1411
BstUI	CGCG	7 cut(s)	107, 275, 281, 421, 435, 437, 444
BstV1I	GCAGC	7 cut(s)	35, 387, 417, 634, 935, 1165, 1205
BstX2I	RGATCY	2 cut(s)	283, 877
BstXI	CCANNNNNNTGG	1 cut(s)	874
BstYI	RGATCY	2 cut(s)	283, 877
Bsu15I	ATCGAT	1 cut(s)	61
BsuTUI	ATCGAT	1 cut(s)	61
BtgI	CCRYGG	2 cut(s)	105, 595
BtrI	CACGTC	1 cut(s)	804
BtsCI	GGATG	3 cut(s)	115, 160, 297
BtsI	GCAGTG	1 cut(s)	627
BtsIMutI	CAGTG	6 cut(s)	627, 701, 1261, 1396, 1402, 1461
CfoI	GCGC	8 cut(s)	277, 385, 423, 435, 437, 568, 722, 853
Cfr10I	RCCGGY	2 cut(s)	222, 1367
Cfr13I	GGNCC	6 cut(s)	4, 82, 605, 635, 704, 1533
Cfr42I	CCGCGG	1 cut(s)	108
ClaI	ATCGAT	1 cut(s)	61
CseI	GACGC	5 cut(s)	332, 464, 631, 1394, 1485
CsiI	ACCWGGT	1 cut(s)	894
Csp6I	GTAC	1 cut(s)	1482
CspAI	ACCGGT	1 cut(s)	1367
CspCI	CAANNNNNGTGG	2 cut(s)	978, 1013
CviAII	CATG	1 cut(s)	463
CviQI	GTAC	1 cut(s)	1482
DdeI	CTNAG	3 cut(s)	66, 731, 1553
DpnI	GATC	7 cut(s)	64, 89, 147, 285, 514, 879, 1158
DpnII	GATC	7 cut(s)	62, 87, 145, 283, 512, 877, 1156
DrdI	GACNNNNNNGTC	1 cut(s)	252
DseDI	GACNNNNNNGTC	1 cut(s)	252
EaeI	YGGCCR	4 cut(s)	855, 1023, 1251, 1443
Eam1104I	CTCTTC	2 cut(s)	314, 567
EarI	CTCTTC	2 cut(s)	314, 567
Eco130I	CCWWGG	1 cut(s)	531
Eco147I	AGGCCT	1 cut(s)	1342
Eco24I	GRGCYC	1 cut(s)	630
Eco31I	GGTCTC	1 cut(s)	943
Eco47I	GGWCC	1 cut(s)	1533
Eco57I	CTGAAG	4 cut(s)	446, 761, 818, 1028
Eco88I	CYCGRG	1 cut(s)	1310
EcoO109I	RGGNCCY	1 cut(s)	1533
EcoRI	GAATTC	1 cut(s)	1430
EcoRII	CCWGG	1 cut(s)	894
EcoT14I	CCWWGG	1 cut(s)	531
EcoT38I	GRGCYC	1 cut(s)	630
ErhI	CCWWGG	1 cut(s)	531
FaeI	CATG	1 cut(s)	466
FaiI	YATR	4 cut(s)	464, 713, 809, 1271
FaqI	GGGAC	1 cut(s)	258
FatI	CATG	1 cut(s)	462
FauI	CCCGC	1 cut(s)	1130
FokI	GGATG	3 cut(s)	122, 167, 284
FriOI	GRGCYC	1 cut(s)	630
FspBI	CTAG	2 cut(s)	101, 1301
GlaI	GCGC	8 cut(s)	276, 384, 422, 434, 436, 567, 721, 852
GsuI	CTGGAG	2 cut(s)	572, 1139
HaeII	RGCGCY	2 cut(s)	386, 569
HgaI	GACGC	5 cut(s)	332, 464, 631, 1394, 1485
HhaI	GCGC	8 cut(s)	277, 385, 423, 435, 437, 568, 722, 853
Hin1I	GRCGYC	3 cut(s)	324, 642, 1386
Hin1II	CATG	1 cut(s)	466
Hin6I	GCGC	8 cut(s)	275, 383, 421, 433, 435, 566, 720, 851
HinP1I	GCGC	8 cut(s)	275, 383, 421, 433, 435, 566, 720, 851
HincII	GTYRAC	1 cut(s)	450
HindII	GTYRAC	1 cut(s)	450
HindIII	AAGCTT	5 cut(s)	743, 773, 830, 965, 1202
HinfI	GANTC	6 cut(s)	122, 727, 736, 798, 1069, 1322
HphI	GGTGA	5 cut(s)	248, 322, 595, 1285, 1382
Hpy166II	GTNNAC	2 cut(s)	450, 519
Hpy188III	TCNNGA	9 cut(s)	661, 824, 881, 958, 1046, 1118, 1160, 1463, 1527
Hpy8I	GTNNAC	2 cut(s)	450, 519
Hpy99I	CGWCG	6 cut(s)	326, 380, 458, 647, 658, 848
HpyAV	CCTTC	8 cut(s)	532, 1001, 1052, 1238, 1276, 1445, 1524, 1551
HpyCH4III	ACNGT	5 cut(s)	238, 614, 696, 995, 1150
HpyCH4IV	ACGT	3 cut(s)	803, 846, 1094
HpyCH4V	TGCA	8 cut(s)	171, 486, 519, 915, 951, 1173, 1209, 1548
HpyF10VI	GCNNNNNNNGC	8 cut(s)	20, 168, 258, 427, 441, 634, 857, 1215
HpyF3I	CTNAG	3 cut(s)	66, 731, 1553
HpySE526I	ACGT	3 cut(s)	803, 846, 1094
Hsp92I	GRCGYC	3 cut(s)	324, 642, 1386
Hsp92II	CATG	1 cut(s)	466
HspAI	GCGC	8 cut(s)	275, 383, 421, 433, 435, 566, 720, 851
Kpn2I	TCCGGA	1 cut(s)	1159
KroI	GCCGGC	1 cut(s)	222
KroNI	GCCGGC	1 cut(s)	224
KspI	CCGCGG	1 cut(s)	108
Kzo9I	GATC	7 cut(s)	62, 87, 145, 283, 512, 877, 1156
LmnI	GCTCC	6 cut(s)	194, 527, 597, 625, 1162, 1190
Lsp1109I	GCAGC	7 cut(s)	35, 387, 417, 634, 935, 1165, 1205
LweI	GCATC	3 cut(s)	87, 197, 378
MabI	ACCWGGT	1 cut(s)	894
MaeI	CTAG	2 cut(s)	101, 1301
MaeII	ACGT	3 cut(s)	803, 846, 1094
MaeIII	GTNAC	7 cut(s)	127, 180, 254, 328, 799, 1303, 1397
MalI	GATC	7 cut(s)	64, 89, 147, 285, 514, 879, 1158
MboI	GATC	7 cut(s)	62, 87, 145, 283, 512, 877, 1156
MboII	GAAGA	5 cut(s)	301, 508, 584, 770, 1210
MfeI	CAATTG	1 cut(s)	868
MflI	RGATCY	2 cut(s)	283, 877
MhlI	GDGCHC	4 cut(s)	521, 630, 1265, 1411
MlsI	TGGCCA	3 cut(s)	1025, 1253, 1445
MluCI	AATT	8 cut(s)	27, 556, 868, 885, 1049, 1105, 1357, 1430
MluNI	TGGCCA	3 cut(s)	1025, 1253, 1445
MlyI	GAGTC	3 cut(s)	131, 730, 807
MmeI	TCCRAC	2 cut(s)	1097, 1550
Mox20I	TGGCCA	3 cut(s)	1025, 1253, 1445
MroI	TCCGGA	1 cut(s)	1159
MroNI	GCCGGC	1 cut(s)	222
MroXI	GAANNNNTTC	4 cut(s)	746, 831, 1053, 1434
MscI	TGGCCA	3 cut(s)	1025, 1253, 1445
MseI	TTAA	4 cut(s)	1212, 1287, 1503, 1514
MslI	CAYNNNNRTG	1 cut(s)	806
Msp20I	TGGCCA	3 cut(s)	1025, 1253, 1445
MspA1I	CMGCKG	2 cut(s)	107, 1441
MspR9I	CCNGG	2 cut(s)	639, 896
MunI	CAATTG	1 cut(s)	868
Mva1269I	GAATGC	1 cut(s)	164
MvaI	CCWGG	1 cut(s)	896
MvnI	CGCG	7 cut(s)	107, 275, 281, 421, 435, 437, 444
MwoI	GCNNNNNNNGC	8 cut(s)	20, 168, 258, 427, 441, 634, 857, 1215
NaeI	GCCGGC	1 cut(s)	224
NciI	CCSGG	1 cut(s)	639
NdeII	GATC	7 cut(s)	62, 87, 145, 283, 512, 877, 1156
NgoMIV	GCCGGC	1 cut(s)	222
NheI	GCTAGC	1 cut(s)	100
NlaIII	CATG	1 cut(s)	466
NlaIV	GGNNCC	9 cut(s)	190, 407, 413, 529, 593, 616, 627, 1262, 1535
NmeAIII	GCCGAG	2 cut(s)	165, 542
NmuCI	GTSAC	5 cut(s)	180, 254, 328, 799, 1397
NspI	RCATGY	1 cut(s)	466
PaeI	GCATGC	1 cut(s)	466
PauI	GCGCGC	1 cut(s)	433
PceI	AGGCCT	1 cut(s)	1342
PcsI	WCGNNNNNNNCGW	2 cut(s)	192, 662
PctI	GAATGC	1 cut(s)	164
PdiI	GCCGGC	1 cut(s)	224
PdmI	GAANNNNTTC	4 cut(s)	746, 831, 1053, 1434
PfeI	GAWTC	3 cut(s)	727, 1069, 1322
PflFI	GACNNNGTC	1 cut(s)	326
PinAI	ACCGGT	1 cut(s)	1367
PleI	GAGTC	3 cut(s)	130, 730, 806
PpsI	GAGTC	3 cut(s)	130, 730, 806
PpuMI	RGGWCCY	1 cut(s)	1533
PsiI	TTATAA	1 cut(s)	713
Psp1406I	AACGTT	1 cut(s)	1094
Psp5II	RGGWCCY	1 cut(s)	1533
Psp6I	CCWGG	1 cut(s)	894
PspGI	CCWGG	1 cut(s)	894
PspN4I	GGNNCC	9 cut(s)	190, 407, 413, 529, 593, 616, 627, 1262, 1535
PspPI	GGNCC	6 cut(s)	4, 82, 605, 635, 704, 1533
PspPPI	RGGWCCY	1 cut(s)	1533
PsuI	RGATCY	2 cut(s)	283, 877
PsyI	GACNNNGTC	1 cut(s)	326
PteI	GCGCGC	1 cut(s)	433
RsaI	GTAC	1 cut(s)	1483
RsaNI	GTAC	1 cut(s)	1482
RseI	CAYNNNNRTG	1 cut(s)	806
SacII	CCGCGG	1 cut(s)	108
SaqAI	TTAA	4 cut(s)	1212, 1287, 1503, 1514
Sau3AI	GATC	7 cut(s)	62, 87, 145, 283, 512, 877, 1156
Sau96I	GGNCC	6 cut(s)	4, 82, 605, 635, 704, 1533
SchI	GAGTC	3 cut(s)	131, 730, 807
ScrFI	CCNGG	2 cut(s)	639, 896
SduI	GDGCHC	4 cut(s)	521, 630, 1265, 1411
SexAI	ACCWGGT	1 cut(s)	894
SfaNI	GCATC	3 cut(s)	87, 197, 378
SfcI	CTRYAG	1 cut(s)	287
Sfr303I	CCGCGG	1 cut(s)	108
SgrAI	CRCCGGYG	1 cut(s)	1367
SgrBI	CCGCGG	1 cut(s)	108
SinI	GGWCC	1 cut(s)	1533
SmiMI	CAYNNNNRTG	1 cut(s)	806
SmlI	CTYRAG	2 cut(s)	659, 958
SmoI	CTYRAG	2 cut(s)	659, 958
SphI	GCATGC	1 cut(s)	466
Sse9I	AATT	8 cut(s)	27, 556, 868, 885, 1049, 1105, 1357, 1430
SseBI	AGGCCT	1 cut(s)	1342
SspMI	CTAG	2 cut(s)	101, 1301
StuI	AGGCCT	1 cut(s)	1342
StyD4I	CCNGG	2 cut(s)	637, 894
StyI	CCWWGG	1 cut(s)	531
TaaI	ACNGT	5 cut(s)	238, 614, 696, 995, 1150
TaiI	ACGT	3 cut(s)	806, 849, 1097
TaqI	TCGA	5 cut(s)	61, 240, 321, 1242, 1428
TaqII	GACCGA	2 cut(s)	467, 925
TasI	AATT	8 cut(s)	27, 556, 868, 885, 1049, 1105, 1357, 1430
TatI	WGTACW	1 cut(s)	1481
TauI	GCSGC	8 cut(s)	23, 39, 107, 444, 592, 709, 860, 1103
TfiI	GAWTC	3 cut(s)	727, 1069, 1322
Tru1I	TTAA	4 cut(s)	1212, 1287, 1503, 1514
Tru9I	TTAA	4 cut(s)	1212, 1287, 1503, 1514
TscAI	CASTG	6 cut(s)	627, 701, 1261, 1396, 1402, 1461
TseFI	GTSAC	5 cut(s)	180, 254, 328, 799, 1397
TseI	GCWGC	7 cut(s)	23, 400, 430, 647, 948, 1178, 1218
Tsp45I	GTSAC	5 cut(s)	180, 254, 328, 799, 1397
TspDTI	ATGAA	3 cut(s)	171, 554, 1020
TspGWI	ACGGA	2 cut(s)	584, 1416
TspRI	CASTG	6 cut(s)	627, 701, 1261, 1396, 1402, 1461
Tth111I	GACNNNGTC	1 cut(s)	326
VneI	GTGCAC	1 cut(s)	517
VpaK11BI	GGWCC	1 cut(s)	1533
XapI	RAATTY	3 cut(s)	885, 1357, 1430
XceI	RCATGY	1 cut(s)	466
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1084
XmnI	GAANNNNTTC	4 cut(s)	746, 831, 1053, 1434
XspI	CTAG	2 cut(s)	101, 1301

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.