Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

1230120 .. 1233843

Gene Structure 3724 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG010400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2313 bp

ATGGCACTGGAGTTTATCGGAGGAGAGATATTTAATCTGCTGAATAAGAGCGTTAAGCGAGCGGTGAAAAGGAGAGTGGCCTTTAAAACCCTTCTCCAAGATATGAGACGGACACTGAAGTCGTTAAAAACACAGGCCAGAGTCATCCAACAGATACGACAGTTGAATTTCGAGCTGGATCTTCCAAACGATGACATAGGCGATCTTGAAGCAAAAGTGATCGAGGGCACACAACTGGTTGACATGTTGTCCGCTATGAAATTTCGTCTGTGGAAATTCTGCTGCAAAAATGATTGGGCCCGCCACCAACTTACTGAGTTGAATTATTCCCTAGAAGGACTGCTACAGATGCTCAAGCTGCCGCTAACAAGACACGTTTTGGAGATCTTGAAATGGGTAAGGAAAATCAACGACGATCAAGATGAAATTAAGGGGCTATTGAAGACTCTAGTACTGCAGCAGAATGGAGGGAATAATTCCATGGAGGCCTCTACCTCGGCTTCAGGAAGCAATACACAGATTGAAGGGAATGGCAGCAAGGCACCAGTGGAATCATTAGAAGGACTGGAAGCAGCATTTGGGGTACTGTTTGATGTCGTTGTAGAAGTGAAAGACAAGACTGTGATGTTCAGACTCCCACTCTGGAATCTCAAATACACGCTAGAGTGCCTAAAGCCACTGGTTGAAGATATTGCTAAAGGCAACAAGGTATTGGATCGCCCTAAACAGGAACTCAAAAATTTAAGAAGACAAGTGGACAATGGTGTTCAGCTCGTTCGCAAGTGCTCCCAGGATCATCAGCTGTGTGCCAAACTCCGAAAGGAAAAATACACCAACCAGCTCTTTTCATTGGATCAATTTCTTCAAAAGCAGTTTCATGTACTTATACTACAGGTAGCAAAAAATCTGATGGACACCTCTGTTTCGATAAGGAATATACAGAAGGTGGTCAAACAAATTCAAGGGAGTGTTATTAAAGGTTCGTGCCAAGTACCTGAAGCCCCTGAACCTCTGGTGCCTAGAGTTGGTGTACAAACTCAATTTGGAATTAACAGTAGTTCGGCTGAAGTACCTGAACCTTCATGGCCTACCGTTGGATTGGATGTGAAGGAGCTAATTGATGGAGAAGTATTTGAGAAGTTGTTAGATGGTGTTACGCGAGCTGTGGACAGGAGAGTGGCATTCAGAGACCTTCTCCAAGATATGAAAAGAACACTTGCTTCTTTAAGAGGAAAGGCCCAGTTCATTCAAAAGACACCAGAGGTTAAGGAATCCAGTCAATCAAGGAATGACATAGCTGATCTTGAAACACAAATGATTGAAGGCGCCAATCTTGTAAACAGGTTGTCCACTTGTCGTGTATACAACTATTGCTGCTTGAATGGTTCCGACCACCAACTTCATGAATTGAATAGCTCTCTTGAAAGACTATTAGAAAACCTTCAGTTTCAGCTAGCAAGGGATGTGTATGACATCTTGAAAGAGGCAAGGCAAAACTATGAAGAACAGGATCTTAAGCAGCTGGCAGAGTTGAGGGAAAACCACGATGATCATGATTTGAGGGAGACAGAAGTTTCACTGATGGATGGAGAGGAAGCGCTCCGGGTAATTGAAGGGAGTGGTGAGGTAACTGAAGCAGGTGGACCTCCATGCCGTAGAGTTGAACTGGATGCGCTGAATACGCAGGGAACAAGTTATGAGATATGGAAAACAGACGAGGCGAATAGCCAAATTGAAAAGAGCAGTTTCCGCATGAAGGTGGGGGTGGAGCAAAATAAGACTAGCACTGTGAATCTAGAGACTTTTATCAGCCAAGTGAACAACAGCTGCATCAGTACAGAGGAGGGGATCAAGCAAATTGAAGCAAGCAGCGTGATACAAAATGAAGCTAAAATTGAAGATGGTTGTGCAGTACCTGAGCTTCCTCAGCTTACAGTTGGATTTGATGAGCCGGCGGAGGAATTGAAGATGAAGCCTTTCAAGGATGGATTAGTGTCAGTGCTTGTGATCACTGCTTCGGGAAAATGTGGGAAAACCACTTTGGCAGCAAAATTTTGTGAAGATGAGGAGATCAAAGATAAATTCAAAAACAACGTGGAATGGTTCACAAAACAGCAGTTTCAACCCAGCAACGCTTGCCTAGTGTCTCTCTCCTCAGATAAACTTTGCTCTGCAGAAACAAAACGGCACAACCTCCGAGTGCCAGAAGTTGATGTTCTACTTTTGAATTTTGGGACAGAGAAGTATGCTTTATCTGAATTTGTGAGACAGTTCGAGAACGCAACAACTGCCACGCTCTGTGATGGATCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009909 GO:0009910 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048519 GO:0048580 GO:0048581 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051239 GO:0051241 GO:0051716 GO:0060089 GO:0060860 GO:0060862 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:2000026 GO:2000241 GO:2000242

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

770

Amino Acids

86.93

Weight (kDa)

5.55

Isoelectric Point (pI)

43.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPW8	PF05659	8 - 117	1.3e-10	Arabidopsis broad-spectrum mildew resistance protein RPW8
RPW8	PF05659	189 - 301	3.1e-20	Arabidopsis broad-spectrum mildew resistance protein RPW8
RPW8	PF05659	375 - 499	3.6e-10	Arabidopsis broad-spectrum mildew resistance protein RPW8

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1628
AasI	GACNNNNNNGTC	1 cut(s)	118
Acc36I	ACCTGC	1 cut(s)	1628
AccB1I	GGYRCC	3 cut(s)	541, 1015, 1325
AccBSI	CCGCTC	1 cut(s)	62
AccI	GTMKAC	1 cut(s)	1362
AccII	CGCG	1 cut(s)	1159
AciI	CCGC	6 cut(s)	62, 252, 301, 362, 1750, 1955
AclWI	GGATC	6 cut(s)	186, 723, 801, 861, 1518, 1856
AcsI	RAATTY	9 cut(s)	166, 260, 275, 739, 957, 2051, 2081, 2227, 2258
AcuI	CTGAAG	6 cut(s)	137, 486, 1017, 1086, 1427, 1653
AcyI	GRCGYC	1 cut(s)	1326
AfaI	GTAC	8 cut(s)	453, 585, 882, 993, 1032, 1071, 1837, 1914
AfeI	AGCGCT	1 cut(s)	1599
AfiI	CCNNNNNNNGG	4 cut(s)	727, 1025, 1094, 1756
AflII	CTTAAG	1 cut(s)	1514
AflIII	ACRYGT	2 cut(s)	243, 373
AhdI	GACNNNNNGTC	1 cut(s)	247
AjnI	CCWGG	1 cut(s)	789
AjuI	GAANNNNNNNTTGG	4 cut(s)	561, 593, 2024, 2056
Alw21I	GWGCWC	1 cut(s)	788
Alw26I	GTCTC	6 cut(s)	100, 1182, 1559, 1793, 2151, 2260
AlwI	GGATC	6 cut(s)	186, 723, 801, 861, 1518, 1856
AlwNI	CAGNNNCTG	1 cut(s)	1916
Aor51HI	AGCGCT	1 cut(s)	1599
AoxI	GGCC	6 cut(s)	78, 135, 297, 486, 1085, 1236
ApaI	GGGCCC	1 cut(s)	301
ApoI	RAATTY	9 cut(s)	166, 260, 275, 739, 957, 2051, 2081, 2227, 2258
Asp700I	GAANNNNTTC	2 cut(s)	1440, 1976
AspLEI	GCGC	3 cut(s)	1328, 1600, 1675
AspS9I	GGNCC	4 cut(s)	297, 298, 1237, 1643
AsuC2I	CCSGG	1 cut(s)	1604
AsuHPI	GGTGA	2 cut(s)	76, 1634
AsuNHI	GCTAGC	1 cut(s)	1453
AvaII	GGWCC	1 cut(s)	1643
BaeGI	GKGCMC	2 cut(s)	230, 301
BaeI	ACNNNNGTAYC	2 cut(s)	146, 179
BanI	GGYRCC	3 cut(s)	541, 1015, 1325
BanII	GRGCYC	1 cut(s)	301
BarI	GAAGNNNNNNTAC	4 cut(s)	327, 359, 1905, 1937
BbsI	GAAGAC	2 cut(s)	449, 754
Bbv12I	GWGCWC	1 cut(s)	788
BbvCI	CCTCAGC	1 cut(s)	1926
BccI	CCATC	8 cut(s)	904, 1115, 1142, 1576, 1580, 1895, 1979, 2297
BceAI	ACGGC	2 cut(s)	1638, 2201
BciT130I	CCWGG	1 cut(s)	791
BclI	TGATCA	2 cut(s)	1549, 2007
BcnI	CCSGG	1 cut(s)	1604
BcoDI	GTCTC	6 cut(s)	100, 1182, 1559, 1793, 2151, 2260
BfaI	CTAG	8 cut(s)	332, 449, 662, 1020, 1454, 1782, 1796, 2141
BfmI	CTRYAG	4 cut(s)	344, 455, 890, 2172
BfoI	RGCGCY	2 cut(s)	1329, 1601
BfrI	CTTAAG	1 cut(s)	1514
BfuAI	ACCTGC	1 cut(s)	1628
BglII	AGATCT	1 cut(s)	384
BmcAI	AGTACT	1 cut(s)	453
Bme1390I	CCNGG	2 cut(s)	791, 1604
Bme18I	GGWCC	1 cut(s)	1643
BmeRI	GACNNNNNGTC	1 cut(s)	247
BmgT120I	GGNCC	4 cut(s)	297, 298, 1237, 1643
BmiI	GGNNCC	5 cut(s)	299, 543, 1017, 1327, 1387
BmrFI	CCNGG	2 cut(s)	791, 1604
BmrI	ACTGGG	1 cut(s)	1234
BmsI	GCATC	3 cut(s)	339, 1660, 1839
BmtI	GCTAGC	1 cut(s)	1457
BmuI	ACTGGG	1 cut(s)	1234
BpiI	GAAGAC	2 cut(s)	449, 754
BplI	GAGNNNNNCTC	2 cut(s)	1179, 1211
BpmI	CTGGAG	1 cut(s)	29
Bpu10I	CCTNAGC	2 cut(s)	1917, 1926
BpuEI	CTTGAG	1 cut(s)	338
BpuMI	CCSGG	1 cut(s)	1604
BsaHI	GRCGYC	1 cut(s)	1326
BsaI	GGTCTC	1 cut(s)	1182
BsaJI	CCNNGG	3 cut(s)	480, 495, 789
Bsc4I	CCNNNNNNNGG	4 cut(s)	727, 1025, 1094, 1756
Bse118I	RCCGGY	1 cut(s)	1951
Bse1I	ACTGG	8 cut(s)	12, 240, 545, 570, 684, 1240, 1275, 1671
BseBI	CCWGG	1 cut(s)	791
BseDI	CCNNGG	3 cut(s)	480, 495, 789
BseGI	GGATG	6 cut(s)	144, 1108, 1468, 1591, 1675, 1990
BseLI	CCNNNNNNNGG	4 cut(s)	727, 1025, 1094, 1756
BseMII	CTCAG	4 cut(s)	306, 1908, 1940, 2169
BseNI	ACTGG	8 cut(s)	12, 240, 545, 570, 684, 1240, 1275, 1671
BseRI	GAGGAG	4 cut(s)	36, 1856, 2081, 2143
BseSI	GKGCMC	2 cut(s)	230, 301
BseYI	CCCAGC	1 cut(s)	2126
BsgI	GTGCAG	1 cut(s)	1929
Bsh1236I	CGCG	1 cut(s)	1159
BshFI	GGCC	6 cut(s)	80, 137, 299, 488, 1087, 1238
BshNI	GGYRCC	3 cut(s)	541, 1015, 1325
BsiHKAI	GWGCWC	1 cut(s)	788
BsiSI	CCGG	2 cut(s)	1603, 1952
BslFI	GGGAC	1 cut(s)	2248
BslI	CCNNNNNNNGG	4 cut(s)	727, 1025, 1094, 1756
BsmAI	GTCTC	6 cut(s)	100, 1182, 1559, 1793, 2151, 2260
BsmBI	CGTCTC	1 cut(s)	100
BsmFI	GGGAC	1 cut(s)	2248
BsmI	GAATGC	1 cut(s)	1181
BsnI	GGCC	6 cut(s)	80, 137, 299, 488, 1087, 1238
Bso31I	GGTCTC	1 cut(s)	1182
Bsp120I	GGGCCC	1 cut(s)	297
Bsp1286I	GDGCHC	3 cut(s)	230, 301, 788
Bsp1407I	TGTACA	1 cut(s)	1030
Bsp19I	CCATGG	1 cut(s)	480
BspACI	CCGC	6 cut(s)	62, 252, 301, 362, 1750, 1955
BspANI	GGCC	6 cut(s)	80, 137, 299, 488, 1087, 1238
BspCNI	CTCAG	4 cut(s)	307, 1909, 1939, 2168
BspFNI	CGCG	1 cut(s)	1159
BspHI	TCATGA	2 cut(s)	1402, 1552
BspLI	GGNNCC	5 cut(s)	299, 543, 1017, 1327, 1387
BspMAI	CTGCAG	2 cut(s)	459, 2176
BspMI	ACCTGC	1 cut(s)	1628
BspOI	GCTAGC	1 cut(s)	1457
BspPI	GGATC	6 cut(s)	186, 723, 801, 861, 1518, 1856
BspT107I	GGYRCC	3 cut(s)	541, 1015, 1325
BspTI	CTTAAG	1 cut(s)	1514
BspTNI	GGTCTC	1 cut(s)	1182
BsrBI	CCGCTC	1 cut(s)	62
BsrFI	RCCGGY	1 cut(s)	1951
BsrGI	TGTACA	1 cut(s)	1030
BsrI	ACTGG	8 cut(s)	12, 240, 545, 570, 684, 1240, 1275, 1671
BssAI	RCCGGY	1 cut(s)	1951
BssECI	CCNNGG	3 cut(s)	480, 495, 789
BssNAI	GTATAC	1 cut(s)	1363
BssNI	GRCGYC	1 cut(s)	1326
BssT1I	CCWWGG	1 cut(s)	480
Bst1107I	GTATAC	1 cut(s)	1363
Bst2UI	CCWGG	1 cut(s)	791
Bst4CI	ACNGT	8 cut(s)	162, 588, 622, 1055, 1093, 1789, 1936, 2271
BstACI	GRCGYC	1 cut(s)	1326
BstAFI	CTTAAG	1 cut(s)	1514
BstAPI	GCANNNNNTGC	2 cut(s)	2136, 2288
BstAUI	TGTACA	1 cut(s)	1030
BstC8I	GCNNGC	8 cut(s)	60, 301, 1161, 1455, 1524, 1867, 1953, 2137
BstDEI	CTNAG	4 cut(s)	315, 1917, 1926, 2155
BstDSI	CCRYGG	1 cut(s)	480
BstF5I	GGATG	6 cut(s)	144, 1108, 1468, 1591, 1675, 1990
BstFNI	CGCG	1 cut(s)	1159
BstH2I	RGCGCY	2 cut(s)	1329, 1601
BstHHI	GCGC	3 cut(s)	1328, 1600, 1675
BstMAI	GTCTC	6 cut(s)	100, 1182, 1559, 1793, 2151, 2260
BstMWI	GCNNNNNNNGC	7 cut(s)	349, 358, 1681, 1749, 1927, 2136, 2288
BstNI	CCWGG	1 cut(s)	791
BstNSI	RCATGY	1 cut(s)	247
BstSCI	CCNGG	2 cut(s)	789, 1602
BstSFI	CTRYAG	4 cut(s)	344, 455, 890, 2172
BstSLI	GKGCMC	2 cut(s)	230, 301
BstUI	CGCG	1 cut(s)	1159
BstV2I	GAAGAC	2 cut(s)	449, 754
BstX2I	RGATCY	4 cut(s)	178, 384, 1510, 2306
BstYI	RGATCY	4 cut(s)	178, 384, 1510, 2306
BstZ17I	GTATAC	1 cut(s)	1363
BsuRI	GGCC	6 cut(s)	80, 137, 299, 488, 1087, 1238
BtgI	CCRYGG	1 cut(s)	480
BtsCI	GGATG	6 cut(s)	144, 1108, 1468, 1591, 1675, 1990
BtsI	GCAGTG	1 cut(s)	2010
BtsIMutI	CAGTG	8 cut(s)	5, 113, 552, 677, 1577, 1785, 2004, 2010
BveI	ACCTGC	1 cut(s)	1628
Cac8I	GCNNGC	8 cut(s)	60, 301, 1161, 1455, 1524, 1867, 1953, 2137
CaiI	CAGNNNCTG	1 cut(s)	1916
CciI	TCATGA	2 cut(s)	1402, 1552
CfoI	GCGC	3 cut(s)	1328, 1600, 1675
Cfr10I	RCCGGY	1 cut(s)	1951
Cfr13I	GGNCC	4 cut(s)	297, 298, 1237, 1643
Csp6I	GTAC	8 cut(s)	452, 584, 881, 992, 1031, 1070, 1836, 1913
CviAII	CATG	8 cut(s)	244, 481, 878, 1083, 1403, 1553, 1650, 1753
CviQI	GTAC	8 cut(s)	452, 584, 881, 992, 1031, 1070, 1836, 1913
DdeI	CTNAG	4 cut(s)	315, 1917, 1926, 2155
DinI	GGCGCC	1 cut(s)	1327
DraI	TTTAAA	1 cut(s)	85
DrdI	GACNNNNNNGTC	1 cut(s)	118
DriI	GACNNNNNGTC	1 cut(s)	247
DseDI	GACNNNNNNGTC	1 cut(s)	118
Eam1105I	GACNNNNNGTC	1 cut(s)	247
EciI	GGCGGA	1 cut(s)	1970
Eco130I	CCWWGG	1 cut(s)	480
Eco147I	AGGCCT	1 cut(s)	488
Eco24I	GRGCYC	1 cut(s)	301
Eco31I	GGTCTC	1 cut(s)	1182
Eco47I	GGWCC	1 cut(s)	1643
Eco47III	AGCGCT	1 cut(s)	1599
Eco57I	CTGAAG	6 cut(s)	137, 486, 1017, 1086, 1427, 1653
EcoRII	CCWGG	1 cut(s)	789
EcoT14I	CCWWGG	1 cut(s)	480
EcoT38I	GRGCYC	1 cut(s)	301
EgeI	GGCGCC	1 cut(s)	1327
EheI	GGCGCC	1 cut(s)	1327
ErhI	CCWWGG	1 cut(s)	480
Esp3I	CGTCTC	1 cut(s)	100
FaeI	CATG	8 cut(s)	247, 484, 881, 1086, 1406, 1556, 1653, 1756
FaqI	GGGAC	1 cut(s)	2248
FatI	CATG	8 cut(s)	243, 480, 877, 1082, 1402, 1552, 1649, 1752
FauI	CCCGC	1 cut(s)	308
FbaI	TGATCA	2 cut(s)	1549, 2007
FblI	GTMKAC	1 cut(s)	1362
FokI	GGATG	6 cut(s)	131, 1115, 1475, 1598, 1682, 1997
FriOI	GRGCYC	1 cut(s)	301
FspBI	CTAG	8 cut(s)	332, 449, 662, 1020, 1454, 1782, 1796, 2141
GlaI	GCGC	3 cut(s)	1327, 1599, 1674
GsaI	CCCAGC	1 cut(s)	2130
GsuI	CTGGAG	1 cut(s)	29
HaeII	RGCGCY	2 cut(s)	1329, 1601
HaeIII	GGCC	6 cut(s)	80, 137, 299, 488, 1087, 1238
HapII	CCGG	2 cut(s)	1603, 1952
HhaI	GCGC	3 cut(s)	1328, 1600, 1675
Hin1I	GRCGYC	1 cut(s)	1326
Hin1II	CATG	8 cut(s)	247, 484, 881, 1086, 1406, 1556, 1653, 1756
Hin6I	GCGC	3 cut(s)	1326, 1598, 1673
HinP1I	GCGC	3 cut(s)	1326, 1598, 1673
HincII	GTYRAC	1 cut(s)	241
HindII	GTYRAC	1 cut(s)	241
HinfI	GANTC	7 cut(s)	141, 445, 551, 633, 646, 1271, 1792
HpaII	CCGG	2 cut(s)	1603, 1952
HphI	GGTGA	2 cut(s)	76, 1634
Hpy188I	TCNGA	9 cut(s)	20, 632, 818, 909, 1187, 1390, 2158, 2198, 2257
Hpy99I	CGWCG	1 cut(s)	416
HpyCH4III	ACNGT	8 cut(s)	162, 588, 622, 1055, 1093, 1789, 1936, 2271
HpyCH4IV	ACGT	2 cut(s)	375, 2094
HpyCH4V	TGCA	5 cut(s)	285, 457, 1830, 1910, 2174
HpyF10VI	GCNNNNNNNGC	7 cut(s)	349, 358, 1681, 1749, 1927, 2136, 2288
HpyF3I	CTNAG	4 cut(s)	315, 1917, 1926, 2155
HpySE526I	ACGT	2 cut(s)	375, 2094
Hsp92I	GRCGYC	1 cut(s)	1326
Hsp92II	CATG	8 cut(s)	247, 484, 881, 1086, 1406, 1556, 1653, 1756
HspAI	GCGC	3 cut(s)	1326, 1598, 1673
KasI	GGCGCC	1 cut(s)	1325
KroI	GCCGGC	1 cut(s)	1951
KroNI	GCCGGC	1 cut(s)	1953
Ksp22I	TGATCA	2 cut(s)	1549, 2007
LmnI	GCTCC	4 cut(s)	791, 1111, 1605, 1768
LweI	GCATC	3 cut(s)	339, 1660, 1839
MaeI	CTAG	8 cut(s)	332, 449, 662, 1020, 1454, 1782, 1796, 2141
MaeII	ACGT	2 cut(s)	375, 2094
MaeIII	GTNAC	2 cut(s)	1153, 1627
MbiI	CCGCTC	1 cut(s)	62
MboII	GAAGA	9 cut(s)	173, 454, 698, 759, 854, 1514, 1910, 1978, 2072
MflI	RGATCY	4 cut(s)	178, 384, 1510, 2306
MhlI	GDGCHC	3 cut(s)	230, 301, 788
Mly113I	GGCGCC	1 cut(s)	1326
MlyI	GAGTC	3 cut(s)	150, 439, 627
MmeI	TCCRAC	4 cut(s)	172, 1075, 1413, 1918
MroNI	GCCGGC	1 cut(s)	1951
MroXI	GAANNNNTTC	2 cut(s)	1440, 1976
MslI	CAYNNNNRTG	1 cut(s)	1757
MspA1I	CMGCKG	3 cut(s)	802, 1522, 1827
MspCI	CTTAAG	1 cut(s)	1514
MspI	CCGG	2 cut(s)	1603, 1952
MspR9I	CCNGG	2 cut(s)	791, 1604
Mva1269I	GAATGC	1 cut(s)	1181
MvaI	CCWGG	1 cut(s)	791
MvnI	CGCG	1 cut(s)	1159
MwoI	GCNNNNNNNGC	7 cut(s)	349, 358, 1681, 1749, 1927, 2136, 2288
NaeI	GCCGGC	1 cut(s)	1953
NarI	GGCGCC	1 cut(s)	1326
NciI	CCSGG	1 cut(s)	1604
NcoI	CCATGG	1 cut(s)	480
NgoMIV	GCCGGC	1 cut(s)	1951
NheI	GCTAGC	1 cut(s)	1453
NlaIII	CATG	8 cut(s)	247, 484, 881, 1086, 1406, 1556, 1653, 1756
NlaIV	GGNNCC	5 cut(s)	299, 543, 1017, 1327, 1387
NmeAIII	GCCGAG	1 cut(s)	476
NspI	RCATGY	1 cut(s)	247
PagI	TCATGA	2 cut(s)	1402, 1552
PaqCI	CACCTGC	1 cut(s)	1628
PceI	AGGCCT	1 cut(s)	488
PciI	ACATGT	1 cut(s)	243
PctI	GAATGC	1 cut(s)	1181
PdiI	GCCGGC	1 cut(s)	1953
PdmI	GAANNNNTTC	2 cut(s)	1440, 1976
PfeI	GAWTC	4 cut(s)	551, 646, 1271, 1792
PleI	GAGTC	3 cut(s)	149, 439, 627
PluTI	GGCGCC	1 cut(s)	1329
PpsI	GAGTC	3 cut(s)	149, 439, 627
PscI	ACATGT	1 cut(s)	243
Psp6I	CCWGG	1 cut(s)	789
PspFI	CCCAGC	1 cut(s)	2126
PspGI	CCWGG	1 cut(s)	789
PspN4I	GGNNCC	5 cut(s)	299, 543, 1017, 1327, 1387
PspOMI	GGGCCC	1 cut(s)	297
PspPI	GGNCC	4 cut(s)	297, 298, 1237, 1643
PstI	CTGCAG	2 cut(s)	459, 2176
PstNI	CAGNNNCTG	1 cut(s)	1916
PsuI	RGATCY	4 cut(s)	178, 384, 1510, 2306
PvuII	CAGCTG	3 cut(s)	802, 1522, 1827
RsaI	GTAC	8 cut(s)	453, 585, 882, 993, 1032, 1071, 1837, 1914
RsaNI	GTAC	8 cut(s)	452, 584, 881, 992, 1031, 1070, 1836, 1913
RseI	CAYNNNNRTG	1 cut(s)	1757
Sau96I	GGNCC	4 cut(s)	297, 298, 1237, 1643
ScaI	AGTACT	1 cut(s)	453
SchI	GAGTC	3 cut(s)	150, 439, 627
ScrFI	CCNGG	2 cut(s)	791, 1604
SduI	GDGCHC	3 cut(s)	230, 301, 788
SfaNI	GCATC	3 cut(s)	339, 1660, 1839
SfcI	CTRYAG	4 cut(s)	344, 455, 890, 2172
SfoI	GGCGCC	1 cut(s)	1327
SinI	GGWCC	1 cut(s)	1643
SmiMI	CAYNNNNRTG	1 cut(s)	1757
SmlI	CTYRAG	2 cut(s)	353, 1514
SmoI	CTYRAG	2 cut(s)	353, 1514
SseBI	AGGCCT	1 cut(s)	488
SsiI	CCGC	6 cut(s)	62, 252, 301, 362, 1750, 1955
SspDI	GGCGCC	1 cut(s)	1325
SspMI	CTAG	8 cut(s)	332, 449, 662, 1020, 1454, 1782, 1796, 2141
StuI	AGGCCT	1 cut(s)	488
StyD4I	CCNGG	2 cut(s)	789, 1602
StyI	CCWWGG	1 cut(s)	480
TaaI	ACNGT	8 cut(s)	162, 588, 622, 1055, 1093, 1789, 1936, 2271
TaiI	ACGT	2 cut(s)	378, 2097
TaqI	TCGA	4 cut(s)	171, 222, 926, 2274
TatI	WGTACW	4 cut(s)	451, 880, 1030, 1835
TauI	GCSGC	1 cut(s)	364
TfiI	GAWTC	4 cut(s)	551, 646, 1271, 1792
TscAI	CASTG	8 cut(s)	12, 120, 552, 684, 1584, 1792, 2004, 2017
TspGWI	ACGGA	1 cut(s)	124
TspRI	CASTG	8 cut(s)	12, 120, 552, 684, 1584, 1792, 2004, 2017
Vha464I	CTTAAG	1 cut(s)	1514
VpaK11BI	GGWCC	1 cut(s)	1643
XapI	RAATTY	9 cut(s)	166, 260, 275, 739, 957, 2051, 2081, 2227, 2258
XbaI	TCTAGA	1 cut(s)	1795
XceI	RCATGY	1 cut(s)	247
XmiI	GTMKAC	1 cut(s)	1362
XmnI	GAANNNNTTC	2 cut(s)	1440, 1976
XspI	CTAG	8 cut(s)	332, 449, 662, 1020, 1454, 1782, 1796, 2141
ZrmI	AGTACT	1 cut(s)	453

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.