Rh1BG035200

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
N/A
Physical Location & Seq
Reverse (-)
4768442 .. 4769625
1184 bp
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UTR
Exon/CDS
Intron
Rh1BG035200.1

Sequence Viewer

Length: 372 bp
ATGCTGTTGATATCCAAGCTCCAACACAAAAATCTTGTAAGAATCATGGGTTTCTGTGTTAAAGAGGATGAGAAGTTACTGATTTATGAGTTCATGCCAAACAAAAGCTTGGACATTCTTCTATTCGGCAAGGGGCTCGACTTTGTAGATGAAGAATTGGTCGAGGCATATTCCTCATCAGAAGTAATGAGATGTGTCCATTTAGGACTTCTTTGTGTACAGGATGAACCCGTCGATAGGCCAACCATGCTTGAGGTCGTTTTAATGCTAAGTAGTAGACAGATGCCCCACAACCGAAGCAGCCGACTTACGCTTGGAAAAATTATGTCCCACAGCATAAAAATAGTTGCTCCACAAATGAAACTACCATAA

Protein Analysis

123

Amino Acids

14.09

Weight (kDa)

6.9

Isoelectric Point (pI)

48.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 277
AfaI GTAC 1 cut(s) 219
AfiI CCNNNNNNNGG 1 cut(s) 237
AluBI AGCT 2 cut(s) 19, 108
AluI AGCT 2 cut(s) 19, 108
AoxI GGCC 1 cut(s) 239
ApeKI GCWGC 1 cut(s) 300
BanII GRGCYC 1 cut(s) 138
BbvI GCAGC 1 cut(s) 312
BcgI CGANNNNNNTGC 2 cut(s) 118, 152
BisI GCNGC 1 cut(s) 301
BlsI GCNGC 1 cut(s) 302
BmsI GCATC 1 cut(s) 273
BpuEI CTTGAG 1 cut(s) 272
Bsc4I CCNNNNNNNGG 1 cut(s) 237
BseGI GGATG 2 cut(s) 73, 229
BseLI CCNNNNNNNGG 1 cut(s) 237
BseXI GCAGC 1 cut(s) 312
BshFI GGCC 1 cut(s) 241
BslFI GGGAC 1 cut(s) 313
BslI CCNNNNNNNGG 1 cut(s) 237
BsmFI GGGAC 1 cut(s) 313
BsnI GGCC 1 cut(s) 241
Bsp1286I GDGCHC 1 cut(s) 138
Bsp1407I TGTACA 1 cut(s) 217
BspANI GGCC 1 cut(s) 241
BsrGI TGTACA 1 cut(s) 217
BstAUI TGTACA 1 cut(s) 217
BstDEI CTNAG 1 cut(s) 269
BstF5I GGATG 2 cut(s) 73, 229
BstMWI GCNNNNNNNGC 1 cut(s) 247
BstV1I GCAGC 1 cut(s) 312
BsuRI GGCC 1 cut(s) 241
BtsCI GGATG 2 cut(s) 73, 229
Csp6I GTAC 1 cut(s) 218
CviAII CATG 3 cut(s) 46, 94, 247
CviJI RGCY 5 cut(s) 19, 108, 136, 241, 303
CviKI_1 RGCY 5 cut(s) 19, 108, 136, 241, 303
CviQI GTAC 1 cut(s) 218
DdeI CTNAG 1 cut(s) 269
Eco24I GRGCYC 1 cut(s) 138
Eco32I GATATC 1 cut(s) 12
EcoRV GATATC 1 cut(s) 12
EcoT38I GRGCYC 1 cut(s) 138
FaeI CATG 3 cut(s) 49, 97, 250
FaiI YATR 8 cut(s) 47, 87, 95, 169, 248, 326, 338, 370
FaqI GGGAC 1 cut(s) 313
FatI CATG 3 cut(s) 45, 93, 246
FblI GTMKAC 1 cut(s) 277
Fnu4HI GCNGC 1 cut(s) 301
FokI GGATG 2 cut(s) 80, 236
FriOI GRGCYC 1 cut(s) 138
Fsp4HI GCNGC 1 cut(s) 301
GluI GCNGC 1 cut(s) 301
HaeIII GGCC 1 cut(s) 241
Hin1II CATG 3 cut(s) 49, 97, 250
HindIII AAGCTT 1 cut(s) 106
HinfI GANTC 1 cut(s) 42
Hpy166II GTNNAC 2 cut(s) 218, 278
Hpy188I TCNGA 1 cut(s) 181
Hpy8I GTNNAC 2 cut(s) 218, 278
Hpy99I CGWCG 1 cut(s) 236
HpyF10VI GCNNNNNNNGC 1 cut(s) 247
HpyF3I CTNAG 1 cut(s) 269
Hsp92II CATG 3 cut(s) 49, 97, 250
LmnI GCTCC 2 cut(s) 24, 355
LpnPI CCDG 1 cut(s) 206
Lsp1109I GCAGC 1 cut(s) 312
LweI GCATC 1 cut(s) 273
MaeIII GTNAC 1 cut(s) 75
MboII GAAGA 2 cut(s) 110, 164
MhlI GDGCHC 1 cut(s) 138
MluCI AATT 2 cut(s) 155, 321
MmeI TCCRAC 1 cut(s) 46
MnlI CCTC 4 cut(s) 58, 157, 184, 247
MseI TTAA 2 cut(s) 60, 263
MwoI GCNNNNNNNGC 1 cut(s) 247
NlaIII CATG 3 cut(s) 49, 97, 250
PfeI GAWTC 1 cut(s) 42
PkrI GCNGC 1 cut(s) 302
RsaI GTAC 1 cut(s) 219
RsaNI GTAC 1 cut(s) 218
SaqAI TTAA 2 cut(s) 60, 263
SatI GCNGC 1 cut(s) 301
SduI GDGCHC 1 cut(s) 138
SetI ASST 3 cut(s) 21, 110, 258
SfaNI GCATC 1 cut(s) 273
SmlI CTYRAG 1 cut(s) 251
SmoI CTYRAG 1 cut(s) 251
Sse9I AATT 2 cut(s) 155, 321
TaqI TCGA 3 cut(s) 138, 162, 234
TasI AATT 2 cut(s) 155, 321
TatI WGTACW 1 cut(s) 217
TfiI GAWTC 1 cut(s) 42
Tru1I TTAA 2 cut(s) 60, 263
Tru9I TTAA 2 cut(s) 60, 263
TseI GCWGC 1 cut(s) 300
TspDTI ATGAA 3 cut(s) 82, 165, 240
XmiI GTMKAC 1 cut(s) 277
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.