Rh1BG095900

Phosphoinositide 3-kinase regulatory subunit

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
N/A
Physical Location & Seq
Reverse (-)
16751223 .. 16754199
2977 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG095900.1

Sequence Viewer

Length: 876 bp
ATGATTGAGCGTGCATTTCCATTGTTATGCTATCCTAGTCAATGGGTAAGAAGGTCGGCTGTCAGTTTTATTACAGCCAGCAGTGATTTCTTGGGTGCAGTAGATTCCTATGTATTCCTTGCTCCTCTTATTCATCCCCTTCTTTGTAGACAGCCAGCATCTCTAGCTTCTGAGAAGGCTCTCCTTTCATGTTTGAAGCCTCCTGTCTCAAGACAGGTATTTTACCAAGTTCTAGAAAATGCAAGGAGTACAGACATGTTGGAAAGACAGAGAAAGATATGGTACAATTCTTGGCCTCAATCTAAACAATGGGAAAGTGTGGATTTACTTCATAAAGGGGTTGTAGAATTGAATTCGATGAGGAGCTGGACAGACGACCAAGAAAGTCCCGATGGTCAAAAACATTCTGGAAATGAATTGCAGCAGGGAAAGCTAACTGAATGTGATGATGGTGAGGCTAAGTTTGGATGTATGGGAAGCTTTACGCGCAATGCTTCGAGCACAGTTGACATTCATGATCCTTTATCCTCTGAAAAGTTGCAGTATTCGGGCTTTATGTGGCCACAGGGAAGTACCGTGTTGAGGGTTGCGAATTATGAAAGTGATACTGAAATGTCTGAGATGCCTTGGGCCTTGGCGAGATCATCAACTAAAAATTCCAAAGTGGATATGAGACGGAATGTCAATCCTCATTACAGAGTTGATGAACTGAATAAACCACCTCTAACAACAAAGTTGACAGCCAAGGCAGTTCTTGCAGCTGCTGCCACTGATACTGCTGGCTGCCATCGTGTTTCAATCCTTTCATTGGCCTCTGTTAAGTTGAATCAAAGACACTTAATTTCAAGCAGTAGAGATAGAGCAATCAAGGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000011 GO:0000151 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0005768 GO:0005770 GO:0005942 GO:0006355 GO:0006357 GO:0006464 GO:0006468 GO:0006605 GO:0006623 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006886 GO:0006914 GO:0006996 GO:0007033 GO:0007034 GO:0007154 GO:0007165 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009555 GO:0009846 GO:0009856 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010008 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0016236 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019219 GO:0019222 GO:0019538 GO:0019898 GO:0022414 GO:0023052 GO:0030242 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031410 GO:0031461 GO:0031967 GO:0031975 GO:0031982 GO:0032182 GO:0032501 GO:0032502 GO:0032507 GO:0032784 GO:0032786 GO:0032968 GO:0032991 GO:0033036 GO:0033365 GO:0034067 GO:0034243 GO:0034271 GO:0034272 GO:0034613 GO:0035032 GO:0035556 GO:0036211 GO:0042886 GO:0043130 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044232 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0045053 GO:0045184 GO:0045185 GO:0045324 GO:0045893 GO:0045935 GO:0045944 GO:0046907 GO:0048015 GO:0048017 GO:0048229 GO:0048308 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051235 GO:0051252 GO:0051254 GO:0051641 GO:0051649 GO:0051651 GO:0051704 GO:0051716 GO:0060255 GO:0061695 GO:0061919 GO:0065007 GO:0065008 GO:0070727 GO:0071561 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072665 GO:0072666 GO:0080008 GO:0080090 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:0120095 GO:0140096 GO:1901564 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:2000112 GO:2001141
Pfam Domains
Protein Families

Protein Analysis

291

Amino Acids

32.67

Weight (kDa)

8.69

Isoelectric Point (pI)

53.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VPS15-like_hel PF22956 1 - 77 1e-19 VPS15-like, helical domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 148
AccII CGCG 1 cut(s) 487
AclWI GGATC 1 cut(s) 512
AcoI YGGCCR 1 cut(s) 560
AcsI RAATTY 2 cut(s) 352, 655
AfaI GTAC 3 cut(s) 250, 284, 574
AfiI CCNNNNNNNGG 2 cut(s) 582, 808
AflIII ACRYGT 1 cut(s) 255
AgsI TTSAA 5 cut(s) 196, 352, 798, 826, 846
AhdI GACNNNNNGTC 1 cut(s) 680
AluBI AGCT 5 cut(s) 167, 366, 433, 480, 761
AluI AGCT 5 cut(s) 167, 366, 433, 480, 761
Alw21I GWGCWC 1 cut(s) 503
Alw26I GTCTC 2 cut(s) 211, 667
AlwI GGATC 1 cut(s) 512
AlwNI CAGNNNCTG 1 cut(s) 764
AoxI GGCC 4 cut(s) 293, 560, 630, 810
ApeKI GCWGC 5 cut(s) 421, 758, 761, 764, 783
ApoI RAATTY 2 cut(s) 352, 655
AspLEI GCGC 1 cut(s) 489
AspS9I GGNCC 1 cut(s) 630
AsuHPI GGTGA 1 cut(s) 464
BalI TGGCCA 1 cut(s) 562
Bbv12I GWGCWC 1 cut(s) 503
BbvI GCAGC 5 cut(s) 433, 748, 751, 770, 770
BccI CCATC 3 cut(s) 386, 443, 795
BcoDI GTCTC 2 cut(s) 211, 667
BfaI CTAG 4 cut(s) 36, 164, 233, 874
BisI GCNGC 5 cut(s) 422, 759, 762, 765, 784
BlsI GCNGC 5 cut(s) 423, 760, 763, 766, 785
BmeRI GACNNNNNGTC 1 cut(s) 680
BmgT120I GGNCC 1 cut(s) 630
BmsI GCATC 2 cut(s) 167, 612
BpuEI CTTGAG 1 cut(s) 193
BsaJI CCNNGG 3 cut(s) 626, 633, 744
Bsc4I CCNNNNNNNGG 2 cut(s) 582, 808
Bse3DI GCAATG 1 cut(s) 496
BseDI CCNNGG 3 cut(s) 626, 633, 744
BseGI GGATG 2 cut(s) 133, 473
BseLI CCNNNNNNNGG 2 cut(s) 582, 808
BseMI GCAATG 1 cut(s) 496
BseMII CTCAG 2 cut(s) 162, 609
BseRI GAGGAG 2 cut(s) 114, 376
BseXI GCAGC 5 cut(s) 433, 748, 751, 770, 770
BsgI GTGCAG 1 cut(s) 117
Bsh1236I CGCG 1 cut(s) 487
BshFI GGCC 4 cut(s) 295, 562, 632, 812
BsiHKAI GWGCWC 1 cut(s) 503
BslFI GGGAC 1 cut(s) 372
BslI CCNNNNNNNGG 2 cut(s) 582, 808
BsmAI GTCTC 2 cut(s) 211, 667
BsmBI CGTCTC 1 cut(s) 667
BsmFI GGGAC 1 cut(s) 372
BsnI GGCC 4 cut(s) 295, 562, 632, 812
Bsp1286I GDGCHC 1 cut(s) 503
Bsp143I GATC 2 cut(s) 517, 641
BspANI GGCC 4 cut(s) 295, 562, 632, 812
BspCNI CTCAG 2 cut(s) 163, 610
BspFNI CGCG 1 cut(s) 487
BspHI TCATGA 1 cut(s) 514
BspPI GGATC 1 cut(s) 512
BsrDI GCAATG 1 cut(s) 496
BssECI CCNNGG 3 cut(s) 626, 633, 744
BssMI GATC 2 cut(s) 517, 641
BssT1I CCWWGG 3 cut(s) 626, 633, 744
Bst4CI ACNGT 2 cut(s) 505, 577
BstAPI GCANNNNNTGC 2 cut(s) 755, 764
BstC8I GCNNGC 4 cut(s) 12, 79, 156, 781
BstDEI CTNAG 3 cut(s) 171, 459, 618
BstF5I GGATG 2 cut(s) 133, 473
BstFNI CGCG 1 cut(s) 487
BstHHI GCGC 1 cut(s) 489
BstKTI GATC 2 cut(s) 520, 644
BstMAI GTCTC 2 cut(s) 211, 667
BstMBI GATC 2 cut(s) 517, 641
BstMWI GCNNNNNNNGC 5 cut(s) 164, 430, 486, 755, 764
BstNSI RCATGY 1 cut(s) 259
BstUI CGCG 1 cut(s) 487
BstV1I GCAGC 5 cut(s) 433, 748, 751, 770, 770
BsuRI GGCC 4 cut(s) 295, 562, 632, 812
BtsCI GGATG 2 cut(s) 133, 473
BtsI GCAGTG 1 cut(s) 88
BtsIMutI CAGTG 2 cut(s) 88, 768
Cac8I GCNNGC 4 cut(s) 12, 79, 156, 781
CaiI CAGNNNCTG 1 cut(s) 764
CciI TCATGA 1 cut(s) 514
CfoI GCGC 1 cut(s) 489
Cfr13I GGNCC 1 cut(s) 630
Csp6I GTAC 3 cut(s) 249, 283, 573
CviAII CATG 3 cut(s) 189, 256, 515
CviQI GTAC 3 cut(s) 249, 283, 573
DdeI CTNAG 3 cut(s) 171, 459, 618
DpnI GATC 2 cut(s) 519, 643
DpnII GATC 2 cut(s) 517, 641
DriI GACNNNNNGTC 1 cut(s) 680
EaeI YGGCCR 1 cut(s) 560
Eam1105I GACNNNNNGTC 1 cut(s) 680
Eco130I CCWWGG 3 cut(s) 626, 633, 744
EcoRI GAATTC 1 cut(s) 352
EcoT14I CCWWGG 3 cut(s) 626, 633, 744
ErhI CCWWGG 3 cut(s) 626, 633, 744
Esp3I CGTCTC 1 cut(s) 667
FaeI CATG 3 cut(s) 192, 259, 518
FaqI GGGAC 1 cut(s) 372
FatI CATG 3 cut(s) 188, 255, 514
FblI GTMKAC 1 cut(s) 148
Fnu4HI GCNGC 5 cut(s) 422, 759, 762, 765, 784
FokI GGATG 2 cut(s) 120, 480
Fsp4HI GCNGC 5 cut(s) 422, 759, 762, 765, 784
FspBI CTAG 4 cut(s) 36, 164, 233, 874
GlaI GCGC 1 cut(s) 488
GluI GCNGC 5 cut(s) 422, 759, 762, 765, 784
HaeIII GGCC 4 cut(s) 295, 562, 632, 812
HhaI GCGC 1 cut(s) 489
Hin1II CATG 3 cut(s) 192, 259, 518
Hin6I GCGC 1 cut(s) 487
HinP1I GCGC 1 cut(s) 487
HincII GTYRAC 2 cut(s) 508, 738
HindII GTYRAC 2 cut(s) 508, 738
HindIII AAGCTT 1 cut(s) 478
HinfI GANTC 2 cut(s) 104, 826
HphI GGTGA 1 cut(s) 464
Hpy166II GTNNAC 3 cut(s) 149, 508, 738
Hpy188I TCNGA 3 cut(s) 172, 532, 619
Hpy188III TCNNGA 5 cut(s) 210, 233, 389, 408, 515
Hpy8I GTNNAC 3 cut(s) 149, 508, 738
HpyAV CCTTC 3 cut(s) 45, 149, 169
HpyCH4III ACNGT 2 cut(s) 505, 577
HpyCH4V TGCA 6 cut(s) 14, 98, 242, 421, 541, 758
HpyF10VI GCNNNNNNNGC 5 cut(s) 164, 430, 486, 755, 764
HpyF3I CTNAG 3 cut(s) 171, 459, 618
Hsp92II CATG 3 cut(s) 192, 259, 518
HspAI GCGC 1 cut(s) 487
Kzo9I GATC 2 cut(s) 517, 641
LmnI GCTCC 2 cut(s) 127, 363
LpnPI CCDG 9 cut(s) 91, 168, 200, 216, 352, 393, 410, 551, 765
Lsp1109I GCAGC 5 cut(s) 433, 748, 751, 770, 770
LweI GCATC 2 cut(s) 167, 612
MaeI CTAG 4 cut(s) 36, 164, 233, 874
MalI GATC 2 cut(s) 519, 643
MboI GATC 2 cut(s) 517, 641
MhlI GDGCHC 1 cut(s) 503
MlsI TGGCCA 1 cut(s) 562
MluCI AATT 7 cut(s) 286, 347, 352, 416, 592, 655, 840
MluNI TGGCCA 1 cut(s) 562
MmeI TCCRAC 1 cut(s) 240
Mox20I TGGCCA 1 cut(s) 562
MscI TGGCCA 1 cut(s) 562
MseI TTAA 2 cut(s) 819, 839
MslI CAYNNNNRTG 1 cut(s) 25
Msp20I TGGCCA 1 cut(s) 562
MspA1I CMGCKG 1 cut(s) 761
MvnI CGCG 1 cut(s) 487
MwoI GCNNNNNNNGC 5 cut(s) 164, 430, 486, 755, 764
NdeII GATC 2 cut(s) 517, 641
NlaIII CATG 3 cut(s) 192, 259, 518
NspI RCATGY 1 cut(s) 259
PagI TCATGA 1 cut(s) 514
PciI ACATGT 1 cut(s) 255
PfeI GAWTC 2 cut(s) 104, 826
PkrI GCNGC 5 cut(s) 423, 760, 763, 766, 785
PscI ACATGT 1 cut(s) 255
PspPI GGNCC 1 cut(s) 630
PstNI CAGNNNCTG 1 cut(s) 764
PvuII CAGCTG 1 cut(s) 761
RsaI GTAC 3 cut(s) 250, 284, 574
RsaNI GTAC 3 cut(s) 249, 283, 573
RseI CAYNNNNRTG 1 cut(s) 25
SaqAI TTAA 2 cut(s) 819, 839
SatI GCNGC 5 cut(s) 422, 759, 762, 765, 784
Sau3AI GATC 2 cut(s) 517, 641
Sau96I GGNCC 1 cut(s) 630
SduI GDGCHC 1 cut(s) 503
SetI ASST 9 cut(s) 56, 169, 219, 368, 435, 482, 724, 763, 873
SfaNI GCATC 2 cut(s) 167, 612
SmiMI CAYNNNNRTG 1 cut(s) 25
SmlI CTYRAG 1 cut(s) 208
SmoI CTYRAG 1 cut(s) 208
Sse9I AATT 7 cut(s) 286, 347, 352, 416, 592, 655, 840
SspMI CTAG 4 cut(s) 36, 164, 233, 874
StyI CCWWGG 3 cut(s) 626, 633, 744
TaaI ACNGT 2 cut(s) 505, 577
TaqI TCGA 2 cut(s) 356, 497
TasI AATT 7 cut(s) 286, 347, 352, 416, 592, 655, 840
TatI WGTACW 1 cut(s) 248
TfiI GAWTC 2 cut(s) 104, 826
Tru1I TTAA 2 cut(s) 819, 839
Tru9I TTAA 2 cut(s) 819, 839
TscAI CASTG 2 cut(s) 88, 775
TseI GCWGC 5 cut(s) 421, 758, 761, 764, 783
TspDTI ATGAA 8 cut(s) 122, 177, 320, 429, 503, 612, 720, 795
TspGWI ACGGA 1 cut(s) 691
TspRI CASTG 2 cut(s) 88, 775
XapI RAATTY 2 cut(s) 352, 655
XbaI TCTAGA 1 cut(s) 232
XceI RCATGY 1 cut(s) 259
XmiI GTMKAC 1 cut(s) 148
XspI CTAG 4 cut(s) 36, 164, 233, 874
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.