Rh1CG316700
HSP70 Family

Heat shock cognate 70 kDa

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
N/A
Physical Location & Seq
Forward (+)
59188578 .. 59189861
1284 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG316700.1

Sequence Viewer

Length: 711 bp
ATGGAGGAAAAAGAAGAACATGCAATAGGGATCGACCTGGGAACCACGTACTCGTGTGTTGCAGTGTGGCAGCACGGTCGTGTTGAGATCATACCCAACGAACAGGGAAACAGGACGACTCCGTCTTGCGTTGCCTTCACCGAGTCCGAGAGCTTGGTCGGCGATGGAGCTATTAACCAGGTGGCCAGAAACCCCACCAACACCGTCTTTGATGCAAAGAGGTTGATTGGTAGAAGATTTAGTGACACCTGTGTTCAAAATGATATGAAGCTCTGGCCATTCAAGGTCATTGAAGGTTTGATTGACAAGCCTGTGATTGTGGTCAACCACAAGGGCCAAGAGAAAAAGTATGCTACTGAAGAAATTTCATCCATGGTTTTGGCAAAGATGCGTGAGATTGCTGAAGGCTATATTGGTGCTACCGTAAAGAATTCAGTAATTACTGTCCCTGCGTACTTCAACAACTCCCAGCGACAAGCTACCAAAAGTGCTGCTGCCACTGCTGGCCTCAATGTGATTCGCATTATCAACGAGCCTACTGCTGTTGCAATTGCTTATGGGCTTGATAAGAAAGCTGGTTGGTATAGCACCAGAAATGTTATGATTTTTGACTTGGGTGGTGGTACTTTAGATGTTTCTCTGCTTTGCATAAGTACTTCTGGTGTCTTTGAAGTGAAGGCAACTGCTGGAGAAACTCACGTTGGTGGTTAA
Functional Annotation

Protein Analysis

236

Amino Acids

25.54

Weight (kDa)

6.12

Isoelectric Point (pI)

34.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 8 - 236 2.2e-100 Hsp70 protein
MreB_Mbl PF06723 140 - 224 6.9e-08 MreB/Mbl protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 121
AclWI GGATC 1 cut(s) 38
AcoI YGGCCR 2 cut(s) 183, 275
AcsI RAATTY 2 cut(s) 363, 430
AcuI CTGAAG 2 cut(s) 378, 423
AfaI GTAC 4 cut(s) 50, 455, 625, 655
AgsI TTSAA 5 cut(s) 257, 283, 293, 460, 671
AjnI CCWGG 2 cut(s) 36, 177
AjuI GAANNNNNNNTTGG 3 cut(s) 396, 428, 684
AleI CACNNNNGTG 2 cut(s) 78, 702
AluBI AGCT 5 cut(s) 153, 170, 271, 479, 575
AluI AGCT 5 cut(s) 153, 170, 271, 479, 575
AlwI GGATC 1 cut(s) 38
AoxI GGCC 4 cut(s) 183, 275, 334, 505
ApeKI GCWGC 3 cut(s) 70, 491, 494
ApoI RAATTY 2 cut(s) 363, 430
AspS9I GGNCC 1 cut(s) 334
AsuHPI GGTGA 1 cut(s) 130
BalI TGGCCA 2 cut(s) 185, 277
BauI CACGAG 1 cut(s) 52
BbvI GCAGC 3 cut(s) 82, 478, 481
BccI CCATC 1 cut(s) 158
BcgI CGANNNNNNTGC 4 cut(s) 59, 93, 521, 555
BciT130I CCWGG 2 cut(s) 38, 179
BisI GCNGC 3 cut(s) 71, 492, 495
BlsI GCNGC 3 cut(s) 72, 493, 496
BmcAI AGTACT 1 cut(s) 655
Bme1390I CCNGG 2 cut(s) 38, 179
BmgT120I GGNCC 1 cut(s) 334
BmiI GGNNCC 1 cut(s) 43
BmrFI CCNGG 2 cut(s) 38, 179
BmsI GCATC 2 cut(s) 202, 378
BpmI CTGGAG 1 cut(s) 708
BsaAI YACGTR 1 cut(s) 48
BsaJI CCNNGG 2 cut(s) 37, 372
BseBI CCWGG 2 cut(s) 38, 179
BseDI CCNNGG 2 cut(s) 37, 372
BseGI GGATG 1 cut(s) 368
BseXI GCAGC 3 cut(s) 82, 478, 481
BseYI CCCAGC 1 cut(s) 468
Bsh1285I CGRYCG 1 cut(s) 79
BshFI GGCC 4 cut(s) 185, 277, 336, 507
BsiEI CGRYCG 1 cut(s) 79
BslFI GGGAC 1 cut(s) 431
BsmFI GGGAC 1 cut(s) 431
BsnI GGCC 4 cut(s) 185, 277, 336, 507
Bsp143I GATC 2 cut(s) 30, 87
Bsp19I CCATGG 1 cut(s) 372
BspANI GGCC 4 cut(s) 185, 277, 336, 507
BspLI GGNNCC 1 cut(s) 43
BspPI GGATC 1 cut(s) 38
BssECI CCNNGG 2 cut(s) 37, 372
BssMI GATC 2 cut(s) 30, 87
BssSI CACGAG 1 cut(s) 52
BssT1I CCWWGG 1 cut(s) 372
Bst2BI CACGAG 1 cut(s) 52
Bst2UI CCWGG 2 cut(s) 38, 179
Bst4CI ACNGT 4 cut(s) 77, 205, 424, 445
BstBAI YACGTR 1 cut(s) 48
BstC8I GCNNGC 1 cut(s) 505
BstDSI CCRYGG 1 cut(s) 372
BstF5I GGATG 1 cut(s) 368
BstKTI GATC 2 cut(s) 33, 90
BstMBI GATC 2 cut(s) 30, 87
BstMCI CGRYCG 1 cut(s) 79
BstMWI GCNNNNNNNGC 2 cut(s) 159, 500
BstNI CCWGG 2 cut(s) 38, 179
BstNSI RCATGY 1 cut(s) 23
BstSCI CCNGG 2 cut(s) 36, 177
BstV1I GCAGC 3 cut(s) 82, 478, 481
BstXI CCANNNNNNTGG 1 cut(s) 379
BsuRI GGCC 4 cut(s) 185, 277, 336, 507
BtgI CCRYGG 1 cut(s) 372
BtgZI GCGATG 1 cut(s) 177
BtsCI GGATG 1 cut(s) 368
BtsI GCAGTG 2 cut(s) 69, 498
BtsIMutI CAGTG 2 cut(s) 69, 498
Cac8I GCNNGC 1 cut(s) 505
Cfr13I GGNCC 1 cut(s) 334
CsiI ACCWGGT 1 cut(s) 177
Csp6I GTAC 4 cut(s) 49, 454, 624, 654
CviAII CATG 2 cut(s) 20, 373
CviQI GTAC 4 cut(s) 49, 454, 624, 654
DpnI GATC 2 cut(s) 32, 89
DpnII GATC 2 cut(s) 30, 87
DrdI GACNNNNNNGTC 1 cut(s) 121
DseDI GACNNNNNNGTC 1 cut(s) 121
EaeI YGGCCR 2 cut(s) 183, 275
Eco130I CCWWGG 1 cut(s) 372
Eco57I CTGAAG 2 cut(s) 378, 423
EcoRI GAATTC 1 cut(s) 430
EcoRII CCWGG 2 cut(s) 36, 177
EcoT14I CCWWGG 1 cut(s) 372
ErhI CCWWGG 1 cut(s) 372
FaeI CATG 2 cut(s) 23, 376
FaqI GGGAC 1 cut(s) 431
FatI CATG 2 cut(s) 19, 372
Fnu4HI GCNGC 3 cut(s) 71, 492, 495
FokI GGATG 1 cut(s) 355
Fsp4HI GCNGC 3 cut(s) 71, 492, 495
GluI GCNGC 3 cut(s) 71, 492, 495
GsaI CCCAGC 1 cut(s) 472
GsuI CTGGAG 1 cut(s) 708
HaeIII GGCC 4 cut(s) 185, 277, 336, 507
Hin1II CATG 2 cut(s) 23, 376
HincII GTYRAC 1 cut(s) 325
HindII GTYRAC 1 cut(s) 325
HinfI GANTC 3 cut(s) 118, 143, 517
HphI GGTGA 1 cut(s) 130
Hpy166II GTNNAC 1 cut(s) 325
Hpy188I TCNGA 1 cut(s) 148
Hpy8I GTNNAC 1 cut(s) 325
HpyAV CCTTC 4 cut(s) 145, 287, 398, 670
HpyCH4III ACNGT 4 cut(s) 77, 205, 424, 445
HpyCH4IV ACGT 2 cut(s) 47, 699
HpyCH4V TGCA 5 cut(s) 23, 62, 215, 548, 648
HpyF10VI GCNNNNNNNGC 2 cut(s) 159, 500
HpySE526I ACGT 2 cut(s) 47, 699
Hsp92II CATG 2 cut(s) 23, 376
Kzo9I GATC 2 cut(s) 30, 87
LmnI GCTCC 1 cut(s) 167
Lsp1109I GCAGC 3 cut(s) 82, 478, 481
LweI GCATC 2 cut(s) 202, 378
MabI ACCWGGT 1 cut(s) 177
MaeII ACGT 2 cut(s) 47, 699
MaeIII GTNAC 1 cut(s) 242
MalI GATC 2 cut(s) 32, 89
MboI GATC 2 cut(s) 30, 87
MboII GAAGA 3 cut(s) 26, 246, 371
MfeI CAATTG 1 cut(s) 549
MlsI TGGCCA 2 cut(s) 185, 277
MluCI AATT 4 cut(s) 363, 430, 438, 549
MluNI TGGCCA 2 cut(s) 185, 277
MlyI GAGTC 2 cut(s) 112, 152
MnlI CCTC 2 cut(s) 213, 518
Mox20I TGGCCA 2 cut(s) 185, 277
MscI TGGCCA 2 cut(s) 185, 277
MseI TTAA 2 cut(s) 174, 709
MslI CAYNNNNRTG 2 cut(s) 78, 702
Msp20I TGGCCA 2 cut(s) 185, 277
MspR9I CCNGG 2 cut(s) 38, 179
MunI CAATTG 1 cut(s) 549
MvaI CCWGG 2 cut(s) 38, 179
MwoI GCNNNNNNNGC 2 cut(s) 159, 500
NcoI CCATGG 1 cut(s) 372
NdeII GATC 2 cut(s) 30, 87
NlaIII CATG 2 cut(s) 23, 376
NlaIV GGNNCC 1 cut(s) 43
NmuCI GTSAC 1 cut(s) 242
NspI RCATGY 1 cut(s) 23
OliI CACNNNNGTG 2 cut(s) 78, 702
PfeI GAWTC 1 cut(s) 517
PflFI GACNNNGTC 1 cut(s) 121
PkrI GCNGC 3 cut(s) 72, 493, 496
PleI GAGTC 2 cut(s) 112, 151
PpsI GAGTC 2 cut(s) 112, 151
Ppu21I YACGTR 1 cut(s) 48
Psp6I CCWGG 2 cut(s) 36, 177
PspFI CCCAGC 1 cut(s) 468
PspGI CCWGG 2 cut(s) 36, 177
PspN4I GGNNCC 1 cut(s) 43
PspPI GGNCC 1 cut(s) 334
PsyI GACNNNGTC 1 cut(s) 121
RsaI GTAC 4 cut(s) 50, 455, 625, 655
RsaNI GTAC 4 cut(s) 49, 454, 624, 654
RseI CAYNNNNRTG 2 cut(s) 78, 702
SaqAI TTAA 2 cut(s) 174, 709
SatI GCNGC 3 cut(s) 71, 492, 495
Sau3AI GATC 2 cut(s) 30, 87
Sau96I GGNCC 1 cut(s) 334
ScaI AGTACT 1 cut(s) 655
SchI GAGTC 2 cut(s) 112, 152
ScrFI CCNGG 2 cut(s) 38, 179
SexAI ACCWGGT 1 cut(s) 177
SfaNI GCATC 2 cut(s) 202, 378
SmiMI CAYNNNNRTG 2 cut(s) 78, 702
Sse9I AATT 4 cut(s) 363, 430, 438, 549
StyD4I CCNGG 2 cut(s) 36, 177
StyI CCWWGG 1 cut(s) 372
TaaI ACNGT 4 cut(s) 77, 205, 424, 445
TaiI ACGT 2 cut(s) 50, 702
TaqI TCGA 1 cut(s) 33
TasI AATT 4 cut(s) 363, 430, 438, 549
TatI WGTACW 1 cut(s) 653
TfiI GAWTC 1 cut(s) 517
Tru1I TTAA 2 cut(s) 174, 709
Tru9I TTAA 2 cut(s) 174, 709
TscAI CASTG 2 cut(s) 69, 505
TseFI GTSAC 1 cut(s) 242
TseI GCWGC 3 cut(s) 70, 491, 494
Tsp45I GTSAC 1 cut(s) 242
TspDTI ATGAA 2 cut(s) 281, 357
TspGWI ACGGA 1 cut(s) 111
TspRI CASTG 2 cut(s) 69, 505
Tth111I GACNNNGTC 1 cut(s) 121
XapI RAATTY 2 cut(s) 363, 430
XceI RCATGY 1 cut(s) 23
ZrmI AGTACT 1 cut(s) 655
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.