Rh1CG352800

protein serine/threonine kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
N/A
Physical Location & Seq
Forward (+)
62869506 .. 62870036
531 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG352800.1

Sequence Viewer

Length: 309 bp
ATGTTCCATTCCGTGATCCAAATATTACACTCGTGTAGAAAAATATGCGCAGCAGATTATAAATGCCCGCGGTGGTTTCCAGATGAAGTGAGGAGCCTCCTGTCTGGGATCCTCAACCCTGATCCAGATAAAAGGATTCTTATTTCAGAGATAATGGAAACTTGCTGGTTTAGAAAAGGCTCCAAATCCGTTACGACCATACCAGAAGTGGAAGACCCGGGTTTGTTGGGCGCTGATGCAGGGTTTGATGATCGTGACAACAGTGAGAAACAACAGCTTGCTAGACCAACCCTCTTTGAACGCTTTTGA

Protein Analysis

102

Amino Acids

11.7

Weight (kDa)

5.63

Isoelectric Point (pI)

43.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 60
Acc16I TGCGCA 1 cut(s) 49
AccII CGCG 1 cut(s) 70
AciI CCGC 2 cut(s) 68, 70
AclWI GGATC 4 cut(s) 10, 103, 116, 116
AgsI TTSAA 1 cut(s) 299
AluBI AGCT 1 cut(s) 277
AluI AGCT 1 cut(s) 277
AlwI GGATC 4 cut(s) 10, 103, 116, 116
Ama87I CYCGRG 1 cut(s) 217
ApeKI GCWGC 1 cut(s) 50
AspLEI GCGC 2 cut(s) 50, 233
AsuC2I CCSGG 2 cut(s) 218, 219
AvaI CYCGRG 1 cut(s) 217
BamHI GGATCC 1 cut(s) 108
BauI CACGAG 1 cut(s) 31
BbsI GAAGAC 1 cut(s) 219
BbvI GCAGC 1 cut(s) 62
BcnI CCSGG 2 cut(s) 218, 219
BfaI CTAG 1 cut(s) 282
BfoI RGCGCY 1 cut(s) 234
BisI GCNGC 1 cut(s) 51
BlsI GCNGC 1 cut(s) 52
Bme1390I CCNGG 2 cut(s) 218, 219
BmeT110I CYCGRG 1 cut(s) 217
BmiI GGNNCC 3 cut(s) 95, 110, 181
BmrFI CCNGG 2 cut(s) 218, 219
BmsI GCATC 1 cut(s) 226
BpiI GAAGAC 1 cut(s) 219
BpuMI CCSGG 2 cut(s) 218, 219
BsaJI CCNNGG 2 cut(s) 68, 217
BseDI CCNNGG 2 cut(s) 68, 217
BseRI GAGGAG 1 cut(s) 106
BseXI GCAGC 1 cut(s) 62
Bsh1236I CGCG 1 cut(s) 70
BsiHKCI CYCGRG 1 cut(s) 217
BsiSI CCGG 1 cut(s) 218
BsoBI CYCGRG 1 cut(s) 217
Bsp143I GATC 4 cut(s) 15, 108, 121, 250
BspACI CCGC 2 cut(s) 68, 70
BspFNI CGCG 1 cut(s) 70
BspLI GGNNCC 3 cut(s) 95, 110, 181
BspPI GGATC 4 cut(s) 10, 103, 116, 116
BssECI CCNNGG 2 cut(s) 68, 217
BssMI GATC 4 cut(s) 15, 108, 121, 250
BssSI CACGAG 1 cut(s) 31
Bst2BI CACGAG 1 cut(s) 31
Bst4CI ACNGT 1 cut(s) 263
BstC8I GCNNGC 2 cut(s) 68, 279
BstDSI CCRYGG 1 cut(s) 68
BstFNI CGCG 1 cut(s) 70
BstH2I RGCGCY 1 cut(s) 234
BstHHI GCGC 2 cut(s) 50, 233
BstKTI GATC 4 cut(s) 18, 111, 124, 253
BstMBI GATC 4 cut(s) 15, 108, 121, 250
BstSCI CCNGG 2 cut(s) 216, 217
BstUI CGCG 1 cut(s) 70
BstV1I GCAGC 1 cut(s) 62
BstV2I GAAGAC 1 cut(s) 219
BstX2I RGATCY 1 cut(s) 108
BstYI RGATCY 1 cut(s) 108
BtgI CCRYGG 1 cut(s) 68
BtsIMutI CAGTG 1 cut(s) 268
Cac8I GCNNGC 2 cut(s) 68, 279
CfoI GCGC 2 cut(s) 50, 233
Cfr42I CCGCGG 1 cut(s) 71
Cfr9I CCCGGG 1 cut(s) 217
CviJI RGCY 3 cut(s) 96, 180, 277
CviKI_1 RGCY 3 cut(s) 96, 180, 277
DpnI GATC 4 cut(s) 17, 110, 123, 252
DpnII GATC 4 cut(s) 15, 108, 121, 250
Eco88I CYCGRG 1 cut(s) 217
FaiI YATR 3 cut(s) 46, 60, 200
FauI CCCGC 1 cut(s) 75
Fnu4HI GCNGC 1 cut(s) 51
Fsp4HI GCNGC 1 cut(s) 51
FspBI CTAG 1 cut(s) 282
FspI TGCGCA 1 cut(s) 49
GlaI GCGC 2 cut(s) 49, 232
GluI GCNGC 1 cut(s) 51
HaeII RGCGCY 1 cut(s) 234
HapII CCGG 1 cut(s) 218
HhaI GCGC 2 cut(s) 50, 233
Hin6I GCGC 2 cut(s) 48, 231
HinP1I GCGC 2 cut(s) 48, 231
HinfI GANTC 1 cut(s) 136
HpaII CCGG 1 cut(s) 218
Hpy188I TCNGA 1 cut(s) 148
Hpy188III TCNNGA 3 cut(s) 80, 125, 254
HpyCH4III ACNGT 1 cut(s) 263
HpyCH4V TGCA 1 cut(s) 239
HspAI GCGC 2 cut(s) 48, 231
KspI CCGCGG 1 cut(s) 71
Kzo9I GATC 4 cut(s) 15, 108, 121, 250
LmnI GCTCC 2 cut(s) 93, 185
LpnPI CCDG 9 cut(s) 90, 93, 113, 132, 138, 151, 216, 225, 231
Lsp1109I GCAGC 1 cut(s) 62
LweI GCATC 1 cut(s) 226
MaeI CTAG 1 cut(s) 282
MaeIII GTNAC 2 cut(s) 190, 254
MalI GATC 4 cut(s) 17, 110, 123, 252
MboI GATC 4 cut(s) 15, 108, 121, 250
MboII GAAGA 1 cut(s) 224
MflI RGATCY 1 cut(s) 108
MnlI CCTC 4 cut(s) 84, 107, 122, 302
MspA1I CMGCKG 1 cut(s) 70
MspI CCGG 1 cut(s) 218
MspR9I CCNGG 2 cut(s) 218, 219
MvnI CGCG 1 cut(s) 70
NciI CCSGG 2 cut(s) 218, 219
NdeII GATC 4 cut(s) 15, 108, 121, 250
NlaIV GGNNCC 3 cut(s) 95, 110, 181
NmuCI GTSAC 1 cut(s) 254
NsbI TGCGCA 1 cut(s) 49
PfeI GAWTC 1 cut(s) 136
PkrI GCNGC 1 cut(s) 52
PsiI TTATAA 1 cut(s) 60
PspN4I GGNNCC 3 cut(s) 95, 110, 181
PsuI RGATCY 1 cut(s) 108
SacII CCGCGG 1 cut(s) 71
SatI GCNGC 1 cut(s) 51
Sau3AI GATC 4 cut(s) 15, 108, 121, 250
ScrFI CCNGG 2 cut(s) 218, 219
SetI ASST 1 cut(s) 279
SfaNI GCATC 1 cut(s) 226
Sfr303I CCGCGG 1 cut(s) 71
SgrBI CCGCGG 1 cut(s) 71
SmaI CCCGGG 1 cut(s) 219
SsiI CCGC 2 cut(s) 68, 70
SspI AATATT 1 cut(s) 24
SspMI CTAG 1 cut(s) 282
StyD4I CCNGG 2 cut(s) 216, 217
TaaI ACNGT 1 cut(s) 263
TfiI GAWTC 1 cut(s) 136
TscAI CASTG 1 cut(s) 268
TseFI GTSAC 1 cut(s) 254
TseI GCWGC 1 cut(s) 50
Tsp45I GTSAC 1 cut(s) 254
TspDTI ATGAA 1 cut(s) 99
TspGWI ACGGA 1 cut(s) 178
TspMI CCCGGG 1 cut(s) 217
TspRI CASTG 1 cut(s) 268
XcmI CCANNNNNNNNNTGG 1 cut(s) 205
XmaI CCCGGG 1 cut(s) 217
XspI CTAG 1 cut(s) 282
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.