Rh1DG127800

U-box domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
N/A
Physical Location & Seq
Forward (+)
26646467 .. 26653666
7200 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG127800.1

Sequence Viewer

Length: 2208 bp
ATGAAGGGAATGAAAGGAAAACTAGTGAAGAGGTTGAAATCAATCCCAAGAGTCCTTCAGGTGAAGCCACAAGATCGAGTTCTTCAGGTAAGCGCATCAGATGGGTATGTGGAAAACCTTCCAAACATCTCAGTTGTCAAATTCCACAAGGAAGAAACAGAGCAGGACAAGCTCAACTGCAGCAGTGTGAGAGAGCAGCAACAACCTGATATTATTGACGTCGATGAGCTCATGAGAGACCTCCTCACAGATTCTGAGGATGAAGTCGACGACGACAAAGAAAACATGATGCCAAGAGTGAAGGCAAAGGACCCAGTTGCTTCTAAGGAGTTTAAATTGAAGCAGAGTAAAGCTACTTTCCCAGATTCAGAAGCCCCACCGGTACTAGAGTCGGAAAGCCGTAAACAAACACCTCTATCGGAGATTGACATCTTGTCTTTCCGGCGACCGGACTTAGATTCCGGTACCCTCTTCGACCCGGACCTACTCGCCGCCTTTCGGCAAGCCGTTATTGAGTATATGAAATTGAGTGAAGCAGAGAGGAAGTCAATAACAGAGATACAAAATATTGAAAACAATGAAAAAGAGGCAGAGGCGGAGCCGGACCCTCTATTAGGCTTCGAAGAGAAATGTCCACCTGGGAGCTTGGAGTCGGTAATTCTCTACACGACAACCCTTCGAGGGATACGAAAGACCTTCGACGATTGCAACAGCATCCGATTTCTGTTAGAGAGCTTTCGGGTTGTGTATTTCGAGCGTGATGTATCGATGCACATGGAATTTAGACAAGAGCTGTGGAAGATTTTGGATTGCAAATCGGTTCCTCCTAAGCTTTTCATCAAGGGGAGATACATTGGGGGAGCAGAGGAGGTTTTGACGCTTCACGAGCAAGGAAAGCTGCGGCCTCTCCTTGCAGGAGTGCCGTTGGATCAATCAGATGGACCGTGTCAAGGTTGCGCTGGAGTTCGGTTTGTGGTTTGTTTCAAATGCCATGGAAGTCACAAGATCATTGCCCAAGAGGGAGAGTCTAATGTGTGCCCGCAGTGTAACGAAAATGGGACACCATTCACCAGAGGACAAGCTTCATCAAACAGATTATATGAGATCTCACCAGACAGCGATGTATCATTCACAAGTAGTGGAGGAAGACCAAGCATTGATCACATGTTTCCTTCTATATGCGGCAGTGTGGAATCAGGAACGCACTCTCAACAATCATTCAACTCAGACTTAGACAACAGAAGATCTACCTCCAAGCAATCCTACTCAAGAACCCAGTTCATTGACATGAACTCCTCATTATCCTCAACTGAGAGTGGAAAATCATGGTCATCCCGAAATATGATTGAAGTTTTGAGCTGCATAAGACATCCAAACATGGTTCTCCTGCTTGGAGCCTGCCCAGAGTATGGTTGTCTGATCTATGAGTACATGGGTAATGGGAGCTTAGAAGACCGTCTGTTTCGACGAGGTAACACCCCAGTTATTCCTTGGCAGCTAAGGTTCCGAATCGCTGCAGAAATTGCCACGGGGCTTTTATTCCTTCACCAGGCCAAGCCAGAACCCTTTGTACACCGTGACTTAAAGCCAGGAAACATTTTGCTAGACCATAACTATGTCAGCAAGATTAGTGATGTAGGTCTGGCCAGGCTTGTCCCTCCATCAGTAGCTGACTCAGTCACTCAGTATCACATGACATCAGCAGCTGGGACATTCTGTTATATCGACCCAGAGTATCAACAAACTGGCTTGCTTGGAACAAAATCTGATATCTACTCACTTGGGGTAATGCTTCTACAAATAATAACAGCCAAACCAGCAATGGGTTTGACTCATCTTGTTGAGCACGCAATTGAGATAGGGACCTTCGCTGAGATGCTTGACCCCGCTGTTCCTGACTGGCCTGTGGAGGAAGCCTTGAAGTTTGCCAAGTTAGCATTACAATGTGCCGAAATGAGGCGAAAAGACAGACCCGATCTTGGCAAGGTAGTGCTACCTGAGCTTAACAGATTGAGAGAACTCGGCGAAAAGGGTGGCATGCTTAATGGTGGTGGAGCATTCTTACTACATAAGTGCTCAGTTTCCACAAAGCAAGAAGTGATGAATGACCCCCAATCTGGATATGCCAGTTCAGTGAGCAATTCGAGCACATCATCTTATGGAGGAAAGAATATTATAGTCGGATTCTTGACGTTTTCTTCGGTATAA

Protein Analysis

735

Amino Acids

81.85

Weight (kDa)

5.57

Isoelectric Point (pI)

51.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glutaredoxin PF00462 219 - 285 3.6e-10 Glutaredoxin
GRXCR1-2_C PF23733 316 - 353 3.6e-13 GRXCR1/2, C-terminal domain
Pkinase PF00069 444 - 658 3.5e-28 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 445 - 663 1.4e-27 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 222
Acc65I GGTACC 1 cut(s) 464
AccB1I GGYRCC 1 cut(s) 464
AccB7I CCANNNNNTGG 1 cut(s) 1409
AccI GTMKAC 1 cut(s) 267
AciI CCGC 6 cut(s) 492, 596, 901, 1040, 1182, 1887
AclWI GGATC 1 cut(s) 936
AcoI YGGCCR 1 cut(s) 1644
AcsI RAATTY 2 cut(s) 140, 779
AcuI CTGAAG 2 cut(s) 41, 68
AcyI GRCGYC 1 cut(s) 219
AfaI GTAC 4 cut(s) 384, 466, 1430, 1572
AflIII ACRYGT 1 cut(s) 1164
AgeI ACCGGT 1 cut(s) 379
AgsI TTSAA 7 cut(s) 37, 340, 572, 985, 1222, 1349, 1921
AhdI GACNNNNNGTC 1 cut(s) 433
AhlI ACTAGT 1 cut(s) 22
AjnI CCWGG 4 cut(s) 637, 1548, 1588, 1646
Alw21I GWGCWC 4 cut(s) 231, 1848, 2078, 2150
Alw26I GTCTC 1 cut(s) 231
AlwI GGATC 1 cut(s) 936
AlwNI CAGNNNCTG 3 cut(s) 254, 1670, 1706
AoxI GGCC 4 cut(s) 902, 1551, 1644, 1901
ApeKI GCWGC 7 cut(s) 180, 196, 898, 1359, 1495, 1514, 1703
ApoI RAATTY 2 cut(s) 140, 779
ArsI GACNNNNNNTTYG 1 cut(s) 2182
AsiGI ACCGGT 1 cut(s) 379
Asp700I GAANNNNTTC 1 cut(s) 117
Asp718I GGTACC 1 cut(s) 464
AspLEI GCGC 2 cut(s) 95, 959
AspS9I GGNCC 5 cut(s) 310, 481, 604, 941, 1863
AsuC2I CCSGG 1 cut(s) 479
AsuHPI GGTGA 4 cut(s) 73, 1060, 1101, 1538
AsuII TTCGAA 1 cut(s) 621
AvaII GGWCC 5 cut(s) 310, 481, 604, 941, 1863
BaeGI GKGCMC 1 cut(s) 1040
BaeI ACNNNNGTAYC 2 cut(s) 374, 407
BalI TGGCCA 1 cut(s) 1646
BanI GGYRCC 1 cut(s) 464
BanII GRGCYC 1 cut(s) 231
BauI CACGAG 1 cut(s) 884
BbsI GAAGAC 2 cut(s) 1153, 1458
Bbv12I GWGCWC 4 cut(s) 231, 1848, 2078, 2150
BbvI GCAGC 7 cut(s) 192, 208, 885, 1346, 1501, 1507, 1715
BccI CCATC 3 cut(s) 95, 932, 1669
BceAI ACGGC 3 cut(s) 384, 491, 907
BciT130I CCWGG 4 cut(s) 639, 1550, 1590, 1648
BciVI GTATCC 1 cut(s) 678
BclI TGATCA 1 cut(s) 1159
BcnI CCSGG 1 cut(s) 479
BcoDI GTCTC 1 cut(s) 231
BcuI ACTAGT 1 cut(s) 22
BfaI CTAG 3 cut(s) 23, 386, 1604
BfmI CTRYAG 2 cut(s) 178, 1515
BfuI GTATCC 1 cut(s) 678
BglII AGATCT 2 cut(s) 1104, 1244
Bme1390I CCNGG 5 cut(s) 479, 639, 1550, 1590, 1648
Bme18I GGWCC 5 cut(s) 310, 481, 604, 941, 1863
BmeRI GACNNNNNGTC 1 cut(s) 433
BmgT120I GGNCC 5 cut(s) 310, 481, 604, 941, 1863
BmiI GGNNCC 8 cut(s) 312, 466, 600, 606, 822, 1396, 1505, 1864
BmrFI CCNGG 5 cut(s) 479, 639, 1550, 1590, 1648
BmrI ACTGGG 3 cut(s) 308, 1270, 1475
BmsI GCATC 5 cut(s) 104, 279, 723, 759, 1866
BmuI ACTGGG 3 cut(s) 308, 1270, 1475
BpiI GAAGAC 2 cut(s) 1153, 1458
BplI GAGNNNNNCTC 2 cut(s) 228, 260
BpmI CTGGAG 1 cut(s) 981
Bpu10I CCTNAGC 3 cut(s) 828, 1499, 1998
Bpu14I TTCGAA 1 cut(s) 621
BpuEI CTTGAG 1 cut(s) 1252
BpuMI CCSGG 1 cut(s) 479
Bsa29I ATCGAT 1 cut(s) 767
BsaBI GATNNNNATC 1 cut(s) 428
BsaHI GRCGYC 1 cut(s) 219
BsaI GGTCTC 1 cut(s) 231
BsaJI CCNNGG 4 cut(s) 638, 991, 1490, 1527
BsaWI WCCGGW 3 cut(s) 379, 448, 461
BsaXI ACNNNNNCTCC 2 cut(s) 1277, 1307
Bse118I RCCGGY 1 cut(s) 379
Bse1I ACTGG 6 cut(s) 314, 1276, 1481, 1750, 1904, 2127
Bse3DI GCAATG 2 cut(s) 1008, 1827
Bse8I GATNNNNATC 1 cut(s) 428
BseBI CCWGG 4 cut(s) 639, 1550, 1590, 1648
BseCI ATCGAT 1 cut(s) 767
BseDI CCNNGG 4 cut(s) 638, 991, 1490, 1527
BseGI GGATG 4 cut(s) 265, 714, 1331, 1369
BseJI GATNNNNATC 1 cut(s) 428
BseMI GCAATG 2 cut(s) 1008, 1827
BseMII CTCAG 9 cut(s) 144, 246, 1239, 1302, 1689, 1697, 1863, 1989, 2091
BseNI ACTGG 6 cut(s) 314, 1276, 1481, 1750, 1904, 2127
BseRI GAGGAG 3 cut(s) 233, 881, 1285
BseSI GKGCMC 1 cut(s) 1040
BseXI GCAGC 7 cut(s) 192, 208, 885, 1346, 1501, 1507, 1715
BseYI CCCAGC 1 cut(s) 1706
Bsh1285I CGRYCG 1 cut(s) 449
BshFI GGCC 4 cut(s) 904, 1553, 1646, 1903
BshNI GGYRCC 1 cut(s) 464
BshTI ACCGGT 1 cut(s) 379
BshVI ATCGAT 1 cut(s) 767
BsiEI CGRYCG 1 cut(s) 449
BsiHKAI GWGCWC 4 cut(s) 231, 1848, 2078, 2150
BsiSI CCGG 6 cut(s) 380, 442, 449, 462, 479, 602
BslFI GGGAC 4 cut(s) 1072, 1640, 1723, 1876
BsmAI GTCTC 1 cut(s) 231
BsmFI GGGAC 4 cut(s) 1072, 1640, 1723, 1876
BsmI GAATGC 1 cut(s) 2057
BsnI GGCC 4 cut(s) 904, 1553, 1646, 1903
Bso31I GGTCTC 1 cut(s) 231
Bsp119I TTCGAA 1 cut(s) 621
Bsp1286I GDGCHC 5 cut(s) 231, 1040, 1848, 2078, 2150
Bsp1407I TGTACA 1 cut(s) 1570
Bsp143I GATC 8 cut(s) 73, 928, 1005, 1104, 1159, 1244, 1419, 1975
Bsp19I CCATGG 1 cut(s) 991
BspACI CCGC 6 cut(s) 492, 596, 901, 1040, 1182, 1887
BspANI GGCC 4 cut(s) 904, 1553, 1646, 1903
BspCNI CTCAG 9 cut(s) 143, 247, 1238, 1303, 1688, 1696, 1864, 1990, 2090
BspDI ATCGAT 1 cut(s) 767
BspHI TCATGA 1 cut(s) 231
BspLI GGNNCC 8 cut(s) 312, 466, 600, 606, 822, 1396, 1505, 1864
BspMAI CTGCAG 2 cut(s) 182, 1519
BspPI GGATC 1 cut(s) 936
BspT104I TTCGAA 1 cut(s) 621
BspT107I GGYRCC 1 cut(s) 464
BspTNI GGTCTC 1 cut(s) 231
BsrDI GCAATG 2 cut(s) 1008, 1827
BsrFI RCCGGY 1 cut(s) 379
BsrGI TGTACA 1 cut(s) 1570
BsrI ACTGG 6 cut(s) 314, 1276, 1481, 1750, 1904, 2127
BssAI RCCGGY 1 cut(s) 379
BssECI CCNNGG 4 cut(s) 638, 991, 1490, 1527
BssMI GATC 8 cut(s) 73, 928, 1005, 1104, 1159, 1244, 1419, 1975
BssNI GRCGYC 1 cut(s) 219
BssSI CACGAG 1 cut(s) 884
BssT1I CCWWGG 2 cut(s) 991, 1490
Bst2BI CACGAG 1 cut(s) 884
Bst2UI CCWGG 4 cut(s) 639, 1550, 1590, 1648
Bst4CI ACNGT 3 cut(s) 945, 1457, 1577
Bst6I CTCTTC 3 cut(s) 23, 476, 618
BstACI GRCGYC 1 cut(s) 219
BstAPI GCANNNNNTGC 1 cut(s) 1523
BstAUI TGTACA 1 cut(s) 1570
BstBI TTCGAA 1 cut(s) 621
BstC8I GCNNGC 6 cut(s) 504, 1040, 1399, 1751, 1848, 2039
BstDSI CCRYGG 2 cut(s) 991, 1527
BstENI CCTNNNNNAGG 2 cut(s) 612, 1547
BstF5I GGATG 4 cut(s) 265, 714, 1331, 1369
BstHHI GCGC 2 cut(s) 95, 959
BstKTI GATC 8 cut(s) 76, 931, 1008, 1107, 1162, 1247, 1422, 1978
BstMAI GTCTC 1 cut(s) 231
BstMBI GATC 8 cut(s) 73, 928, 1005, 1104, 1159, 1244, 1419, 1975
BstMCI CGRYCG 1 cut(s) 449
BstMWI GCNNNNNNNGC 8 cut(s) 169, 886, 895, 1523, 1817, 1934, 1999, 2145
BstNI CCWGG 4 cut(s) 639, 1550, 1590, 1648
BstNSI RCATGY 2 cut(s) 1168, 2041
BstSCI CCNGG 5 cut(s) 477, 637, 1548, 1588, 1646
BstSFI CTRYAG 2 cut(s) 178, 1515
BstSLI GKGCMC 1 cut(s) 1040
BstV1I GCAGC 7 cut(s) 192, 208, 885, 1346, 1501, 1507, 1715
BstV2I GAAGAC 2 cut(s) 1153, 1458
BstX2I RGATCY 2 cut(s) 1104, 1244
BstYI RGATCY 2 cut(s) 1104, 1244
Bsu15I ATCGAT 1 cut(s) 767
BsuI GTATCC 1 cut(s) 678
BsuRI GGCC 4 cut(s) 904, 1553, 1646, 1903
BsuTUI ATCGAT 1 cut(s) 767
BtgI CCRYGG 2 cut(s) 991, 1527
BtgZI GCGATG 1 cut(s) 1134
BtsCI GGATG 4 cut(s) 265, 714, 1331, 1369
BtsI GCAGTG 3 cut(s) 190, 1049, 1192
BtsIMutI CAGTG 4 cut(s) 190, 1049, 1192, 2139
Cac8I GCNNGC 6 cut(s) 504, 1040, 1399, 1751, 1848, 2039
CaiI CAGNNNCTG 3 cut(s) 254, 1670, 1706
CciI TCATGA 1 cut(s) 231
CfoI GCGC 2 cut(s) 95, 959
Cfr10I RCCGGY 1 cut(s) 379
Cfr13I GGNCC 5 cut(s) 310, 481, 604, 941, 1863
ClaI ATCGAT 1 cut(s) 767
CseI GACGC 1 cut(s) 886
Csp6I GTAC 4 cut(s) 383, 465, 1429, 1571
CspAI ACCGGT 1 cut(s) 379
CspCI CAANNNNNGTGG 2 cut(s) 776, 811
CviQI GTAC 4 cut(s) 383, 465, 1429, 1571
DpnI GATC 8 cut(s) 75, 930, 1007, 1106, 1161, 1246, 1421, 1977
DpnII GATC 8 cut(s) 73, 928, 1005, 1104, 1159, 1244, 1419, 1975
DraI TTTAAA 1 cut(s) 334
DriI GACNNNNNGTC 1 cut(s) 433
EaeI YGGCCR 1 cut(s) 1644
Eam1104I CTCTTC 3 cut(s) 23, 476, 618
Eam1105I GACNNNNNGTC 1 cut(s) 433
EarI CTCTTC 3 cut(s) 23, 476, 618
EciI GGCGGA 1 cut(s) 611
Ecl136II GAGCTC 1 cut(s) 229
Eco130I CCWWGG 2 cut(s) 991, 1490
Eco24I GRGCYC 1 cut(s) 231
Eco31I GGTCTC 1 cut(s) 231
Eco32I GATATC 1 cut(s) 1771
Eco47I GGWCC 5 cut(s) 310, 481, 604, 941, 1863
Eco53kI GAGCTC 1 cut(s) 229
Eco57I CTGAAG 2 cut(s) 41, 68
EcoICRI GAGCTC 1 cut(s) 229
EcoNI CCTNNNNNAGG 2 cut(s) 612, 1547
EcoO109I RGGNCCY 2 cut(s) 310, 1863
EcoRII CCWGG 4 cut(s) 637, 1548, 1588, 1646
EcoRV GATATC 1 cut(s) 1771
EcoT14I CCWWGG 2 cut(s) 991, 1490
EcoT38I GRGCYC 1 cut(s) 231
ErhI CCWWGG 2 cut(s) 991, 1490
FaqI GGGAC 4 cut(s) 1072, 1640, 1723, 1876
FauI CCCGC 2 cut(s) 1047, 1894
FbaI TGATCA 1 cut(s) 1159
FblI GTMKAC 1 cut(s) 267
FokI GGATG 4 cut(s) 272, 701, 1318, 1356
FriOI GRGCYC 1 cut(s) 231
FspBI CTAG 3 cut(s) 23, 386, 1604
GlaI GCGC 2 cut(s) 94, 958
GsaI CCCAGC 1 cut(s) 1710
GsuI CTGGAG 1 cut(s) 981
HaeIII GGCC 4 cut(s) 904, 1553, 1646, 1903
HapII CCGG 6 cut(s) 380, 442, 449, 462, 479, 602
HgaI GACGC 1 cut(s) 886
HhaI GCGC 2 cut(s) 95, 959
Hin1I GRCGYC 1 cut(s) 219
Hin6I GCGC 2 cut(s) 93, 957
HinP1I GCGC 2 cut(s) 93, 957
HincII GTYRAC 1 cut(s) 268
HindII GTYRAC 1 cut(s) 268
HindIII AAGCTT 2 cut(s) 830, 1080
HpaII CCGG 6 cut(s) 380, 442, 449, 462, 479, 602
HphI GGTGA 4 cut(s) 73, 1060, 1101, 1538
Hpy166II GTNNAC 4 cut(s) 268, 404, 635, 1573
Hpy188III TCNNGA 8 cut(s) 232, 884, 1197, 1269, 1335, 1895, 2118, 2188
Hpy8I GTNNAC 4 cut(s) 268, 404, 635, 1573
Hpy99I CGWCG 5 cut(s) 224, 272, 275, 704, 1470
HpyAV CCTTC 8 cut(s) 65, 128, 295, 686, 706, 1182, 1553, 1876
HpyCH4III ACNGT 3 cut(s) 945, 1457, 1577
HpyCH4IV ACGT 2 cut(s) 219, 2192
HpyCH4V TGCA 7 cut(s) 180, 708, 772, 813, 914, 1362, 1517
HpyF10VI GCNNNNNNNGC 8 cut(s) 169, 886, 895, 1523, 1817, 1934, 1999, 2145
HpySE526I ACGT 2 cut(s) 219, 2192
Hsp92I GRCGYC 1 cut(s) 219
HspAI GCGC 2 cut(s) 93, 957
KpnI GGTACC 1 cut(s) 468
Ksp22I TGATCA 1 cut(s) 1159
Kzo9I GATC 8 cut(s) 73, 928, 1005, 1104, 1159, 1244, 1419, 1975
LmnI GCTCC 6 cut(s) 598, 642, 860, 1394, 1443, 2054
Lsp1109I GCAGC 7 cut(s) 192, 208, 885, 1346, 1501, 1507, 1715
LweI GCATC 5 cut(s) 104, 279, 723, 759, 1866
MaeI CTAG 3 cut(s) 23, 386, 1604
MaeII ACGT 2 cut(s) 219, 2192
MaeIII GTNAC 5 cut(s) 998, 1046, 1472, 1577, 1678
MalI GATC 8 cut(s) 75, 930, 1007, 1106, 1161, 1246, 1421, 1977
MboI GATC 8 cut(s) 73, 928, 1005, 1104, 1159, 1244, 1419, 1975
MfeI CAATTG 1 cut(s) 1851
MflI RGATCY 2 cut(s) 1104, 1244
MhlI GDGCHC 5 cut(s) 231, 1040, 1848, 2078, 2150
MlsI TGGCCA 1 cut(s) 1646
MluCI AATT 8 cut(s) 140, 335, 524, 657, 779, 1521, 1851, 2140
MluNI TGGCCA 1 cut(s) 1646
MlyI GAGTC 6 cut(s) 60, 398, 659, 1034, 1667, 1825
MmeI TCCRAC 3 cut(s) 372, 906, 2161
Mox20I TGGCCA 1 cut(s) 1646
MroXI GAANNNNTTC 1 cut(s) 117
MscI TGGCCA 1 cut(s) 1646
MseI TTAA 4 cut(s) 333, 1583, 2004, 2043
MslI CAYNNNNRTG 3 cut(s) 1286, 1614, 1942
Msp20I TGGCCA 1 cut(s) 1646
MspA1I CMGCKG 2 cut(s) 1706, 1889
MspI CCGG 6 cut(s) 380, 442, 449, 462, 479, 602
MspR9I CCNGG 5 cut(s) 479, 639, 1550, 1590, 1648
MunI CAATTG 1 cut(s) 1851
Mva1269I GAATGC 1 cut(s) 2057
MvaI CCWGG 4 cut(s) 639, 1550, 1590, 1648
MwoI GCNNNNNNNGC 8 cut(s) 169, 886, 895, 1523, 1817, 1934, 1999, 2145
NciI CCSGG 1 cut(s) 479
NcoI CCATGG 1 cut(s) 991
NdeII GATC 8 cut(s) 73, 928, 1005, 1104, 1159, 1244, 1419, 1975
NlaIV GGNNCC 8 cut(s) 312, 466, 600, 606, 822, 1396, 1505, 1864
NmeAIII GCCGAG 1 cut(s) 2001
NmuCI GTSAC 3 cut(s) 998, 1577, 1678
NspI RCATGY 2 cut(s) 1168, 2041
NspV TTCGAA 1 cut(s) 621
PaeI GCATGC 1 cut(s) 2041
PagI TCATGA 1 cut(s) 231
PciI ACATGT 1 cut(s) 1164
PcsI WCGNNNNNNNCGW 1 cut(s) 685
PctI GAATGC 1 cut(s) 2057
PdmI GAANNNNTTC 1 cut(s) 117
PfeI GAWTC 6 cut(s) 251, 365, 458, 1193, 1509, 2184
PflFI GACNNNGTC 2 cut(s) 945, 1676
PflMI CCANNNNNTGG 1 cut(s) 1409
PinAI ACCGGT 1 cut(s) 379
PleI GAGTC 6 cut(s) 59, 397, 658, 1033, 1667, 1825
PpsI GAGTC 6 cut(s) 59, 397, 658, 1033, 1667, 1825
PpuMI RGGWCCY 2 cut(s) 310, 1863
PscI ACATGT 1 cut(s) 1164
Psp124BI GAGCTC 1 cut(s) 231
Psp5II RGGWCCY 2 cut(s) 310, 1863
Psp6I CCWGG 4 cut(s) 637, 1548, 1588, 1646
PspFI CCCAGC 1 cut(s) 1706
PspGI CCWGG 4 cut(s) 637, 1548, 1588, 1646
PspN4I GGNNCC 8 cut(s) 312, 466, 600, 606, 822, 1396, 1505, 1864
PspPI GGNCC 5 cut(s) 310, 481, 604, 941, 1863
PspPPI RGGWCCY 2 cut(s) 310, 1863
PsrI GAACNNNNNNTAC 2 cut(s) 1554, 1586
PstI CTGCAG 2 cut(s) 182, 1519
PstNI CAGNNNCTG 3 cut(s) 254, 1670, 1706
PsuI RGATCY 2 cut(s) 1104, 1244
PsyI GACNNNGTC 2 cut(s) 945, 1676
PvuII CAGCTG 1 cut(s) 1706
RsaI GTAC 4 cut(s) 384, 466, 1430, 1572
RsaNI GTAC 4 cut(s) 383, 465, 1429, 1571
RseI CAYNNNNRTG 3 cut(s) 1286, 1614, 1942
SacI GAGCTC 1 cut(s) 231
SalI GTCGAC 1 cut(s) 266
SaqAI TTAA 4 cut(s) 333, 1583, 2004, 2043
Sau3AI GATC 8 cut(s) 73, 928, 1005, 1104, 1159, 1244, 1419, 1975
Sau96I GGNCC 5 cut(s) 310, 481, 604, 941, 1863
SchI GAGTC 6 cut(s) 60, 398, 659, 1034, 1667, 1825
ScrFI CCNGG 5 cut(s) 479, 639, 1550, 1590, 1648
SduI GDGCHC 5 cut(s) 231, 1040, 1848, 2078, 2150
SfaNI GCATC 5 cut(s) 104, 279, 723, 759, 1866
SfcI CTRYAG 2 cut(s) 178, 1515
SfuI TTCGAA 1 cut(s) 621
SinI GGWCC 5 cut(s) 310, 481, 604, 941, 1863
SmiMI CAYNNNNRTG 3 cut(s) 1286, 1614, 1942
SmlI CTYRAG 1 cut(s) 1267
SmoI CTYRAG 1 cut(s) 1267
SpeI ACTAGT 1 cut(s) 22
SphI GCATGC 1 cut(s) 2041
Sse9I AATT 8 cut(s) 140, 335, 524, 657, 779, 1521, 1851, 2140
SsiI CCGC 6 cut(s) 492, 596, 901, 1040, 1182, 1887
SspI AATATT 2 cut(s) 568, 2173
SspMI CTAG 3 cut(s) 23, 386, 1604
SstI GAGCTC 1 cut(s) 231
StyD4I CCNGG 5 cut(s) 477, 637, 1548, 1588, 1646
StyI CCWWGG 2 cut(s) 991, 1490
TaaI ACNGT 3 cut(s) 945, 1457, 1577
TaiI ACGT 2 cut(s) 222, 2195
TasI AATT 8 cut(s) 140, 335, 524, 657, 779, 1521, 1851, 2140
TatI WGTACW 2 cut(s) 1428, 1570
TauI GCSGC 3 cut(s) 494, 904, 1185
TfiI GAWTC 6 cut(s) 251, 365, 458, 1193, 1509, 2184
Tru1I TTAA 4 cut(s) 333, 1583, 2004, 2043
Tru9I TTAA 4 cut(s) 333, 1583, 2004, 2043
TscAI CASTG 4 cut(s) 190, 1049, 1192, 2139
TseFI GTSAC 3 cut(s) 998, 1577, 1678
TseI GCWGC 7 cut(s) 180, 196, 898, 1359, 1495, 1514, 1703
Tsp45I GTSAC 3 cut(s) 998, 1577, 1678
TspRI CASTG 4 cut(s) 190, 1049, 1192, 2139
Tth111I GACNNNGTC 2 cut(s) 945, 1676
Van91I CCANNNNNTGG 1 cut(s) 1409
VpaK11BI GGWCC 5 cut(s) 310, 481, 604, 941, 1863
XagI CCTNNNNNAGG 2 cut(s) 612, 1547
XapI RAATTY 2 cut(s) 140, 779
XceI RCATGY 2 cut(s) 1168, 2041
XcmI CCANNNNNNNNNTGG 2 cut(s) 1488, 1819
XmiI GTMKAC 1 cut(s) 267
XmnI GAANNNNTTC 1 cut(s) 117
XspI CTAG 3 cut(s) 23, 386, 1604
ZraI GACGTC 1 cut(s) 220
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.