Rh1DG333200
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
N/A
Physical Location & Seq
Forward (+)
55914430 .. 55915719
1290 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG333200.1

Sequence Viewer

Length: 522 bp
ATGTTGGGTTCTGTAATCTCACCAGCTAGGTTGGGAGATCGGTCACACAGGACCGAGAATTCTCTGATACTTATATCAGACACCAAATTGCTTGTCCATCTCCAACTCTATCTTCCCCAAATCCGTCTCTCAGCTGTATATTGCTCGCTTCTTCAAGTTCTTGATCTGAGAATGGCAGAAGCAAGAGGCCGTGCAATTGGGATTGATCTGGGGACAATATATTCTTTTGTTGCTGTGTGGGAGCACGAACAGGGTCATGTGGAAATCCTAATGAATGATCAGGGCAACAGGACAACCCCATCTTATGTTGCATTCACTGATATTGAGAGCTTAGTAGGTGATGCAGCATTTAACCAAATTCTGAGAAACCCTACCAACTCAATCTTTGGTAGGATTATTAATTATCTCAGACCATCAATTTTATTTCAAGTGTTCTCATTGTGCAATTGTTGCTCTGTGAATGTTAGTCTTTTTAATTTGTTGACTGCTACAAATATAGCTACAGAATGTGTGCCTAATTAA
Functional Annotation

Protein Analysis

173

Amino Acids

19.23

Weight (kDa)

6.04

Isoelectric Point (pI)

40.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 65 - 129 1.1e-19 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 58, 357
AgsI TTSAA 2 cut(s) 155, 428
AjuI GAANNNNNNNTTGG 2 cut(s) 96, 128
AluBI AGCT 4 cut(s) 26, 134, 330, 500
AluI AGCT 4 cut(s) 26, 134, 330, 500
Alw21I GWGCWC 1 cut(s) 246
Alw26I GTCTC 1 cut(s) 131
AoxI GGCC 1 cut(s) 187
ApeKI GCWGC 1 cut(s) 344
ApoI RAATTY 2 cut(s) 58, 357
ArsI GACNNNNNNTTYG 2 cut(s) 78, 110
AseI ATTAAT 1 cut(s) 399
AspS9I GGNCC 1 cut(s) 51
AsuHPI GGTGA 2 cut(s) 12, 350
AvaII GGWCC 1 cut(s) 51
Bbv12I GWGCWC 1 cut(s) 246
BbvI GCAGC 1 cut(s) 356
BccI CCATC 3 cut(s) 105, 307, 421
BceAI ACGGC 1 cut(s) 174
BclI TGATCA 1 cut(s) 277
BcoDI GTCTC 1 cut(s) 131
BfaI CTAG 1 cut(s) 27
BfmI CTRYAG 1 cut(s) 501
BisI GCNGC 1 cut(s) 345
BlsI GCNGC 1 cut(s) 346
Bme18I GGWCC 1 cut(s) 51
BmgT120I GGNCC 1 cut(s) 51
BmsI GCATC 1 cut(s) 331
BseMII CTCAG 4 cut(s) 144, 158, 353, 421
BseXI GCAGC 1 cut(s) 356
BshFI GGCC 1 cut(s) 189
BsiHKAI GWGCWC 1 cut(s) 246
BslFI GGGAC 1 cut(s) 226
BsmAI GTCTC 1 cut(s) 131
BsmBI CGTCTC 1 cut(s) 131
BsmFI GGGAC 1 cut(s) 226
BsmI GAATGC 1 cut(s) 311
BsnI GGCC 1 cut(s) 189
Bsp1286I GDGCHC 1 cut(s) 246
Bsp143I GATC 4 cut(s) 37, 163, 205, 277
BspANI GGCC 1 cut(s) 189
BspCNI CTCAG 4 cut(s) 143, 159, 354, 420
BssMI GATC 4 cut(s) 37, 163, 205, 277
BstAPI GCANNNNNTGC 1 cut(s) 450
BstC8I GCNNGC 1 cut(s) 146
BstDEI CTNAG 5 cut(s) 130, 167, 331, 362, 407
BstKTI GATC 4 cut(s) 40, 166, 208, 280
BstMAI GTCTC 1 cut(s) 131
BstMBI GATC 4 cut(s) 37, 163, 205, 277
BstMWI GCNNNNNNNGC 1 cut(s) 450
BstSFI CTRYAG 1 cut(s) 501
BstV1I GCAGC 1 cut(s) 356
BsuRI GGCC 1 cut(s) 189
BtsIMutI CAGTG 1 cut(s) 315
Cac8I GCNNGC 1 cut(s) 146
Cfr13I GGNCC 1 cut(s) 51
CviAII CATG 1 cut(s) 257
CviJI RGCY 5 cut(s) 26, 134, 189, 330, 500
CviKI_1 RGCY 5 cut(s) 26, 134, 189, 330, 500
DdeI CTNAG 5 cut(s) 130, 167, 331, 362, 407
DpnI GATC 4 cut(s) 39, 165, 207, 279
DpnII GATC 4 cut(s) 37, 163, 205, 277
Eco47I GGWCC 1 cut(s) 51
EcoRI GAATTC 1 cut(s) 58
Esp3I CGTCTC 1 cut(s) 131
FaeI CATG 1 cut(s) 260
FaiI YATR 6 cut(s) 74, 139, 220, 258, 306, 497
FaqI GGGAC 1 cut(s) 226
FatI CATG 1 cut(s) 256
FbaI TGATCA 1 cut(s) 277
Fnu4HI GCNGC 1 cut(s) 345
Fsp4HI GCNGC 1 cut(s) 345
FspBI CTAG 1 cut(s) 27
GluI GCNGC 1 cut(s) 345
HaeIII GGCC 1 cut(s) 189
Hin1II CATG 1 cut(s) 260
HincII GTYRAC 1 cut(s) 483
HindII GTYRAC 1 cut(s) 483
HphI GGTGA 2 cut(s) 12, 350
Hpy166II GTNNAC 1 cut(s) 483
Hpy188I TCNGA 5 cut(s) 66, 79, 168, 363, 410
Hpy188III TCNNGA 1 cut(s) 161
Hpy8I GTNNAC 1 cut(s) 483
HpyCH4V TGCA 4 cut(s) 194, 311, 344, 444
HpyF10VI GCNNNNNNNGC 1 cut(s) 450
HpyF3I CTNAG 5 cut(s) 130, 167, 331, 362, 407
Hsp92II CATG 1 cut(s) 260
Ksp22I TGATCA 1 cut(s) 277
Kzo9I GATC 4 cut(s) 37, 163, 205, 277
LmnI GCTCC 1 cut(s) 241
LpnPI CCDG 6 cut(s) 34, 36, 194, 236, 266, 274
Lsp1109I GCAGC 1 cut(s) 356
LweI GCATC 1 cut(s) 331
MaeI CTAG 1 cut(s) 27
MaeIII GTNAC 1 cut(s) 42
MalI GATC 4 cut(s) 39, 165, 207, 279
MboI GATC 4 cut(s) 37, 163, 205, 277
MboII GAAGA 2 cut(s) 104, 143
MfeI CAATTG 2 cut(s) 195, 445
MhlI GDGCHC 1 cut(s) 246
MluCI AATT 9 cut(s) 58, 86, 195, 357, 400, 417, 445, 475, 517
MmeI TCCRAC 1 cut(s) 127
MnlI CCTC 1 cut(s) 179
MseI TTAA 4 cut(s) 351, 399, 474, 520
MspA1I CMGCKG 1 cut(s) 134
MunI CAATTG 2 cut(s) 195, 445
Mva1269I GAATGC 1 cut(s) 311
MwoI GCNNNNNNNGC 1 cut(s) 450
NdeII GATC 4 cut(s) 37, 163, 205, 277
NlaIII CATG 1 cut(s) 260
NmuCI GTSAC 1 cut(s) 42
PctI GAATGC 1 cut(s) 311
PkrI GCNGC 1 cut(s) 346
PshBI ATTAAT 1 cut(s) 399
PspPI GGNCC 1 cut(s) 51
PvuII CAGCTG 1 cut(s) 134
SaqAI TTAA 4 cut(s) 351, 399, 474, 520
SatI GCNGC 1 cut(s) 345
Sau3AI GATC 4 cut(s) 37, 163, 205, 277
Sau96I GGNCC 1 cut(s) 51
SduI GDGCHC 1 cut(s) 246
SetI ASST 6 cut(s) 28, 32, 136, 332, 340, 502
SfaNI GCATC 1 cut(s) 331
SfcI CTRYAG 1 cut(s) 501
SinI GGWCC 1 cut(s) 51
Sse9I AATT 9 cut(s) 58, 86, 195, 357, 400, 417, 445, 475, 517
SspMI CTAG 1 cut(s) 27
TaqII GACCGA 2 cut(s) 30, 68
TasI AATT 9 cut(s) 58, 86, 195, 357, 400, 417, 445, 475, 517
Tru1I TTAA 4 cut(s) 351, 399, 474, 520
Tru9I TTAA 4 cut(s) 351, 399, 474, 520
TscAI CASTG 1 cut(s) 322
TseFI GTSAC 1 cut(s) 42
TseI GCWGC 1 cut(s) 344
Tsp45I GTSAC 1 cut(s) 42
TspDTI ATGAA 1 cut(s) 287
TspGWI ACGGA 1 cut(s) 113
TspRI CASTG 1 cut(s) 322
VpaK11BI GGWCC 1 cut(s) 51
VspI ATTAAT 1 cut(s) 399
XapI RAATTY 2 cut(s) 58, 357
XspI CTAG 1 cut(s) 27
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.