Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

61535085 .. 61540070

Gene Structure 4986 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG414900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGAAGCTTCAATGGACACCTTTAGCAATCCTACTATGCCTTCTTTTTCTTCAGTTTACCTCAGCAGAGCCAACACCCATGAAGTGTACCGACACAACTCGCCTCTGCACATCGTTCCTGGCCTTCAAGCCCGAACCCAATCAGACCCTGCCGGTGATTCAGTCCATGTTCGACGTGTTACCGGAAGACGTCACCGTCGGCGACCGTGGCTACGTCTTCATAAAAAAGAACTGTTCTTGCGCTTCTAGGGTCAACGAGTATTTGACAAACACGACGTTTACGGTGAGATCGAGTGAAGGGTTTGTGTCTGACGTGGTGAATGAGGCCTATGGTGGCCTGACTTTCCTGCCCAACTCGACGAGGCGGGCCAGAAACGGCGCCGTTGTGTGGCTGAGGCTGCTGTGCGGGTGTTCGAGTGGGCTGTGGAACTATTTGATGAGCTATGTGATGGGGGAGGGGGATAGCATTGAGTCTTTGGCGAGTCGGTTCGGGGTTAGTATGGATAGTATTGAGAAAGTTAATGGGATTGTTGATCCTGATAATGTCACTGTTGGTGCTCTGTATTACATACCTTTGAATTCAGTTCCTGGTGAGCCTTATCCTTTGGAGACTATTTCTCCTGCTCCTGTTCCTGCTCCACCTGTTGACAATTTGTCAGCAAATCATGTGAATCATAAGGCGCATTTGCCCTATTTATGGATCGTAGGAAGTCTGGGGTTAGTTCTTGTTGTGATAGTAATAGGTATAGTTCTATATGTTTGCCTGAGGTCATCAAACTGCTGCAGTGAAGCACAAAGAAGTCACTCAAAAGATCCTGATCGTAAGATTAGGTTTCACATTCTTCGGAGCCCCAGTTTCTTTTGTGGTTCAGGAAGGTTCACCTGTTGCACGTCTGCTGATTGGAAGCAAACCAATGGGGATTCTAGCAACCAGCAGATAACTATTCCCAAAGTTCTTGGCAGTCATGTACTTGACATGGAAAAACCGGTGGTTTTTACATATGAAGAAATCTTTTCCTCAACAGATGGATTCTCTGATTCACGTCTTCTGGGAAATGGAACTTATGGTTCTGTGTATTATGGCTTACTTCATGAGCAGGAAGTTGCTATTAAAAGAATGACTGTTACAAAAACCAAAGAATTTCTAGCAGAAGTAAAAGTTCTATGCAGGGTTCATCATTCTAATCTGGTAGAATTGATTGGTTATGCAGCAACTGAAGATGAGCTCTTCTTAATATATGAGTACGCCCAAAAAGGTTCACTTAAAAGCCATTTGCATGATCCTCAGAACAAGGGGTCAGATCCAAGTTCAGCAGAGGTTGTTGAGCCTTGTATTACAAGGCTCAACTTGCCCTGGCCAGGCTGGTTTCCACCCTACCTGTTTAACCGAAATCGGTCCCTAGATACGGAAATATTTCACAAAATTCTCTCTTCAAGTTCCTCGCTGGGGCATACCCTTACTCTAAATATAATTTTGGATTGGCAAAACTTGTTGGTAAAACAGGTGAAGGAGAAGCTACGATACTTGAGCGATGGGCGTGCTACTACAAAAAGTGATATTTATGCTTTTGGAGTTGTTCTCTTCGAGATTTTATCAGGGAAGGAGGCTGTTATACGAACTGAAGGCACAGTTACAAAAACTCCTGAAAGACGCTCACTGGTATCCATTATGCAAGCAGCTCTTAAAAGCGCATCTGACTCCATGAGTATGTCAATCTTGAAAGATTACATTGATCCAAATCTGATGGACTTGTATCCCCATGATTGTCTACTCAAGGTGGCCATGATAGCTAAGCAATGTGTAGATGAAGATCCCATCCTACGGCCTGACATGAAACAAATTGTTATTTCCCTGTCACAAATCCTCCTATCCTCGGTCGAGTGGGAAGCTACTCTTGCGGGGAACAGCCAGGTATTCAGTGGCCTTGTTCAGGGAAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010646 GO:0010647 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023051 GO:0023052 GO:0023056 GO:0031347 GO:0031348 GO:0032870 GO:0033993 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0048518 GO:0048519 GO:0048522 GO:0048583 GO:0048584 GO:0048585 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0097305 GO:0097306 GO:0098542 GO:0140096 GO:1901419 GO:1901421 GO:1901564 GO:1901700 GO:1901701 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

646

Amino Acids

71.77

Weight (kDa)

6.09

Isoelectric Point (pI)

45.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM3_LYK4_5	PF23473	144 - 181	7.8e-06	LYK4/5 LysM3 domain
LysM	PF01476	152 - 185	8e-06	LysM domain
Pkinase	PF00069	345 - 427	6.4e-13	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	348 - 433	7.7e-16	Protein tyrosine and serine/threonine kinase
PK_Tyr_Ser-Thr	PF07714	509 - 617	2.8e-07	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	194
AatII	GACGTC	1 cut(s)	192
AccB1I	GGYRCC	1 cut(s)	377
AccI	GTMKAC	1 cut(s)	1768
AciI	CCGC	3 cut(s)	364, 405, 1898
AclWI	GGATC	7 cut(s)	527, 707, 806, 1274, 1295, 1727, 1805
AcoI	YGGCCR	2 cut(s)	1355, 1779
AcsI	RAATTY	3 cut(s)	577, 1139, 1422
AcuI	CTGAAG	3 cut(s)	35, 1236, 1641
AcyI	GRCGYC	2 cut(s)	189, 378
AfaI	GTAC	3 cut(s)	88, 969, 1244
AfiI	CCNNNNNNNGG	8 cut(s)	387, 696, 1358, 1405, 1446, 1821, 1873, 1930
AflIII	ACRYGT	1 cut(s)	174
AgeI	ACCGGT	1 cut(s)	985
AgsI	TTSAA	5 cut(s)	11, 127, 577, 1434, 1720
AhdI	GACNNNNNGTC	1 cut(s)	652
AjiI	CACGTC	4 cut(s)	175, 313, 891, 1043
AjnI	CCWGG	5 cut(s)	117, 586, 1352, 1357, 1908
AluBI	AGCT	7 cut(s)	7, 441, 1225, 1516, 1679, 1790, 1889
AluI	AGCT	7 cut(s)	7, 441, 1225, 1516, 1679, 1790, 1889
Alw21I	GWGCWC	2 cut(s)	559, 1227
Alw26I	GTCTC	1 cut(s)	602
AlwI	GGATC	7 cut(s)	527, 707, 806, 1274, 1295, 1727, 1805
AlwNI	CAGNNNCTG	3 cut(s)	148, 587, 1214
AoxI	GGCC	8 cut(s)	120, 324, 334, 366, 1355, 1779, 1823, 1921
ApeKI	GCWGC	4 cut(s)	397, 780, 1208, 1676
ApoI	RAATTY	3 cut(s)	577, 1139, 1422
AsiGI	ACCGGT	1 cut(s)	985
Asp700I	GAANNNNTTC	1 cut(s)	1413
AspLEI	GCGC	4 cut(s)	242, 380, 682, 1691
AspS9I	GGNCC	2 cut(s)	366, 1395
AsuHPI	GGTGA	7 cut(s)	166, 184, 295, 328, 602, 871, 1516
AvaII	GGWCC	1 cut(s)	1395
AxyI	CCTNAGG	1 cut(s)	764
BalI	TGGCCA	2 cut(s)	1357, 1781
BanI	GGYRCC	1 cut(s)	377
BanII	GRGCYC	2 cut(s)	851, 1227
BarI	GAAGNNNNNNTAC	2 cut(s)	1505, 1537
BbsI	GAAGAC	3 cut(s)	192, 208, 1037
Bbv12I	GWGCWC	2 cut(s)	559, 1227
BbvCI	CCTCAGC	2 cut(s)	61, 392
BbvI	GCAGC	4 cut(s)	384, 767, 1220, 1688
BccI	CCATC	5 cut(s)	442, 1019, 1526, 1738, 1823
BceAI	ACGGC	3 cut(s)	365, 391, 1838
BcgI	CGANNNNNNTGC	2 cut(s)	1520, 1554
BciT130I	CCWGG	5 cut(s)	119, 588, 1354, 1359, 1910
BciVI	GTATCC	2 cut(s)	1672, 1764
BcoDI	GTCTC	1 cut(s)	602
BfaI	CTAG	4 cut(s)	246, 924, 1145, 1400
BfmI	CTRYAG	1 cut(s)	781
BfoI	RGCGCY	1 cut(s)	381
BfuI	GTATCC	2 cut(s)	1672, 1764
BisI	GCNGC	4 cut(s)	398, 781, 1209, 1677
BlpI	GCTNAGC	1 cut(s)	1791
BlsI	GCNGC	4 cut(s)	399, 782, 1210, 1678
Bme1390I	CCNGG	5 cut(s)	119, 588, 1354, 1359, 1910
Bme18I	GGWCC	1 cut(s)	1395
BmeRI	GACNNNNNGTC	1 cut(s)	652
BmgBI	CACGTC	4 cut(s)	175, 313, 891, 1043
BmgT120I	GGNCC	2 cut(s)	366, 1395
BmiI	GGNNCC	3 cut(s)	379, 848, 1397
BmrFI	CCNGG	5 cut(s)	119, 588, 1354, 1359, 1910
BmrI	ACTGGG	1 cut(s)	846
BmsI	GCATC	1 cut(s)	1700
BmuI	ACTGGG	1 cut(s)	846
BpiI	GAAGAC	3 cut(s)	192, 208, 1037
BplI	GAGNNNNNCTC	2 cut(s)	1563, 1595
Bpu10I	CCTNAGC	2 cut(s)	61, 392
Bpu1102I	GCTNAGC	1 cut(s)	1791
BpuEI	CTTGAG	2 cut(s)	1546, 1757
BsaBI	GATNNNNATC	3 cut(s)	816, 1737, 1809
BsaHI	GRCGYC	2 cut(s)	189, 378
BsaJI	CCNNGG	3 cut(s)	205, 1352, 1872
BsaWI	WCCGGW	2 cut(s)	181, 985
BsaXI	ACNNNNNCTCC	8 cut(s)	601, 631, 838, 868, 1624, 1654, 1848, 1878
Bsc4I	CCNNNNNNNGG	8 cut(s)	387, 696, 1358, 1405, 1446, 1821, 1873, 1930
Bse118I	RCCGGY	2 cut(s)	151, 985
Bse1I	ACTGG	2 cut(s)	852, 1662
Bse21I	CCTNAGG	1 cut(s)	764
Bse3DI	GCAATG	1 cut(s)	1802
Bse8I	GATNNNNATC	3 cut(s)	816, 1737, 1809
BseBI	CCWGG	5 cut(s)	119, 588, 1354, 1359, 1910
BseDI	CCNNGG	3 cut(s)	205, 1352, 1872
BseGI	GGATG	1 cut(s)	1815
BseJI	GATNNNNATC	3 cut(s)	816, 1737, 1809
BseLI	CCNNNNNNNGG	8 cut(s)	387, 696, 1358, 1405, 1446, 1821, 1873, 1930
BseMI	GCAATG	1 cut(s)	1802
BseMII	CTCAG	4 cut(s)	75, 383, 755, 1298
BseNI	ACTGG	2 cut(s)	852, 1662
BseXI	GCAGC	4 cut(s)	384, 767, 1220, 1688
BseYI	CCCAGC	1 cut(s)	1444
BsgI	GTGCAG	1 cut(s)	91
Bsh1285I	CGRYCG	2 cut(s)	205, 1878
BshFI	GGCC	8 cut(s)	122, 326, 336, 368, 1357, 1781, 1825, 1923
BshNI	GGYRCC	1 cut(s)	377
BshTI	ACCGGT	1 cut(s)	985
BsiEI	CGRYCG	2 cut(s)	205, 1878
BsiHKAI	GWGCWC	2 cut(s)	559, 1227
BsiSI	CCGG	3 cut(s)	152, 182, 986
BslFI	GGGAC	1 cut(s)	1381
BslI	CCNNNNNNNGG	8 cut(s)	387, 696, 1358, 1405, 1446, 1821, 1873, 1930
BsmAI	GTCTC	1 cut(s)	602
BsmFI	GGGAC	1 cut(s)	1381
BsnI	GGCC	8 cut(s)	122, 326, 336, 368, 1357, 1781, 1825, 1923
Bsp1286I	GDGCHC	3 cut(s)	559, 851, 1227
Bsp143I	GATC	9 cut(s)	287, 532, 699, 811, 817, 1279, 1300, 1732, 1810
Bsp1720I	GCTNAGC	1 cut(s)	1791
BspACI	CCGC	3 cut(s)	364, 405, 1898
BspANI	GGCC	8 cut(s)	122, 326, 336, 368, 1357, 1781, 1825, 1923
BspCNI	CTCAG	4 cut(s)	74, 384, 756, 1297
BspHI	TCATGA	1 cut(s)	1090
BspLI	GGNNCC	3 cut(s)	379, 848, 1397
BspMAI	CTGCAG	1 cut(s)	785
BspPI	GGATC	7 cut(s)	527, 707, 806, 1274, 1295, 1727, 1805
BspQI	GCTCTTC	1 cut(s)	1232
BspT107I	GGYRCC	1 cut(s)	377
BsrDI	GCAATG	1 cut(s)	1802
BsrFI	RCCGGY	2 cut(s)	151, 985
BsrI	ACTGG	2 cut(s)	852, 1662
BssAI	RCCGGY	2 cut(s)	151, 985
BssECI	CCNNGG	3 cut(s)	205, 1352, 1872
BssMI	GATC	9 cut(s)	287, 532, 699, 811, 817, 1279, 1300, 1732, 1810
BssNI	GRCGYC	2 cut(s)	189, 378
Bst2UI	CCWGG	5 cut(s)	119, 588, 1354, 1359, 1910
Bst4CI	ACNGT	7 cut(s)	196, 206, 233, 283, 550, 1123, 1630
Bst6I	CTCTTC	3 cut(s)	1232, 1435, 1586
BstACI	GRCGYC	2 cut(s)	189, 378
BstC8I	GCNNGC	3 cut(s)	366, 1539, 1674
BstDEI	CTNAG	5 cut(s)	61, 392, 764, 1284, 1791
BstDSI	CCRYGG	1 cut(s)	205
BstENI	CCTNNNNNAGG	1 cut(s)	1928
BstF5I	GGATG	1 cut(s)	1815
BstH2I	RGCGCY	1 cut(s)	381
BstHHI	GCGC	4 cut(s)	242, 380, 682, 1691
BstKTI	GATC	9 cut(s)	290, 535, 702, 814, 820, 1282, 1303, 1735, 1813
BstMAI	GTCTC	1 cut(s)	602
BstMBI	GATC	9 cut(s)	287, 532, 699, 811, 817, 1279, 1300, 1732, 1810
BstMCI	CGRYCG	2 cut(s)	205, 1878
BstMWI	GCNNNNNNNGC	5 cut(s)	207, 397, 1348, 1787, 1895
BstNI	CCWGG	5 cut(s)	119, 588, 1354, 1359, 1910
BstSCI	CCNGG	5 cut(s)	117, 586, 1352, 1357, 1908
BstSFI	CTRYAG	1 cut(s)	781
BstV1I	GCAGC	4 cut(s)	384, 767, 1220, 1688
BstV2I	GAAGAC	3 cut(s)	192, 208, 1037
BstX2I	RGATCY	3 cut(s)	811, 1300, 1810
BstYI	RGATCY	3 cut(s)	811, 1300, 1810
Bsu36I	CCTNAGG	1 cut(s)	764
BsuI	GTATCC	2 cut(s)	1672, 1764
BsuRI	GGCC	8 cut(s)	122, 326, 336, 368, 1357, 1781, 1825, 1923
BtgI	CCRYGG	1 cut(s)	205
BtgZI	GCGATG	1 cut(s)	1545
BtrI	CACGTC	4 cut(s)	175, 313, 891, 1043
BtsCI	GGATG	1 cut(s)	1815
BtsI	GCAGTG	1 cut(s)	790
BtsIMutI	CAGTG	4 cut(s)	546, 790, 1655, 1924
Cac8I	GCNNGC	3 cut(s)	366, 1539, 1674
CaiI	CAGNNNCTG	3 cut(s)	148, 587, 1214
CciI	TCATGA	1 cut(s)	1090
CfoI	GCGC	4 cut(s)	242, 380, 682, 1691
Cfr10I	RCCGGY	2 cut(s)	151, 985
Cfr13I	GGNCC	2 cut(s)	366, 1395
CseI	GACGC	1 cut(s)	1659
Csp6I	GTAC	3 cut(s)	87, 968, 1243
CspAI	ACCGGT	1 cut(s)	985
CviQI	GTAC	3 cut(s)	87, 968, 1243
DdeI	CTNAG	5 cut(s)	61, 392, 764, 1284, 1791
DinI	GGCGCC	1 cut(s)	379
DpnI	GATC	9 cut(s)	289, 534, 701, 813, 819, 1281, 1302, 1734, 1812
DpnII	GATC	9 cut(s)	287, 532, 699, 811, 817, 1279, 1300, 1732, 1810
DrdI	GACNNNNNNGTC	1 cut(s)	194
DriI	GACNNNNNGTC	1 cut(s)	652
DseDI	GACNNNNNNGTC	1 cut(s)	194
EaeI	YGGCCR	2 cut(s)	1355, 1779
Eam1104I	CTCTTC	3 cut(s)	1232, 1435, 1586
Eam1105I	GACNNNNNGTC	1 cut(s)	652
EarI	CTCTTC	3 cut(s)	1232, 1435, 1586
Ecl136II	GAGCTC	1 cut(s)	1225
Eco147I	AGGCCT	1 cut(s)	326
Eco24I	GRGCYC	2 cut(s)	851, 1227
Eco47I	GGWCC	1 cut(s)	1395
Eco53kI	GAGCTC	1 cut(s)	1225
Eco57I	CTGAAG	3 cut(s)	35, 1236, 1641
Eco81I	CCTNAGG	1 cut(s)	764
EcoICRI	GAGCTC	1 cut(s)	1225
EcoNI	CCTNNNNNAGG	1 cut(s)	1928
EcoRI	GAATTC	1 cut(s)	577
EcoRII	CCWGG	5 cut(s)	117, 586, 1352, 1357, 1908
EcoT38I	GRGCYC	2 cut(s)	851, 1227
EgeI	GGCGCC	1 cut(s)	379
EheI	GGCGCC	1 cut(s)	379
FalI	AAGNNNNNCTT	6 cut(s)	1245, 1277, 1665, 1697, 1878, 1910
FaqI	GGGAC	1 cut(s)	1381
FauI	CCCGC	3 cut(s)	357, 398, 1891
FauNDI	CATATG	1 cut(s)	1000
FblI	GTMKAC	1 cut(s)	1768
Fnu4HI	GCNGC	4 cut(s)	398, 781, 1209, 1677
FokI	GGATG	1 cut(s)	1802
FriOI	GRGCYC	2 cut(s)	851, 1227
Fsp4HI	GCNGC	4 cut(s)	398, 781, 1209, 1677
FspBI	CTAG	4 cut(s)	246, 924, 1145, 1400
GlaI	GCGC	4 cut(s)	241, 379, 681, 1690
GluI	GCNGC	4 cut(s)	398, 781, 1209, 1677
GsaI	CCCAGC	1 cut(s)	1448
HaeII	RGCGCY	1 cut(s)	381
HaeIII	GGCC	8 cut(s)	122, 326, 336, 368, 1357, 1781, 1825, 1923
HapII	CCGG	3 cut(s)	152, 182, 986
HgaI	GACGC	1 cut(s)	1659
HhaI	GCGC	4 cut(s)	242, 380, 682, 1691
Hin1I	GRCGYC	2 cut(s)	189, 378
Hin6I	GCGC	4 cut(s)	240, 378, 680, 1689
HinP1I	GCGC	4 cut(s)	240, 378, 680, 1689
HincII	GTYRAC	2 cut(s)	253, 646
HindII	GTYRAC	2 cut(s)	253, 646
HindIII	AAGCTT	1 cut(s)	5
HinfI	GANTC	8 cut(s)	157, 470, 481, 670, 920, 1029, 1037, 1697
HpaII	CCGG	3 cut(s)	152, 182, 986
HphI	GGTGA	7 cut(s)	166, 184, 295, 328, 602, 871, 1516
Hpy166II	GTNNAC	8 cut(s)	57, 87, 253, 279, 646, 879, 1259, 1769
Hpy188I	TCNGA	8 cut(s)	144, 310, 846, 1036, 1287, 1300, 1696, 1743
Hpy188III	TCNNGA	7 cut(s)	536, 815, 870, 1091, 1585, 1643, 1717
Hpy8I	GTNNAC	8 cut(s)	57, 87, 253, 279, 646, 879, 1259, 1769
Hpy99I	CGWCG	4 cut(s)	176, 200, 277, 361
HpyAV	CCTTC	8 cut(s)	50, 133, 290, 867, 1501, 1594, 1616, 1929
HpyCH4III	ACNGT	7 cut(s)	196, 206, 233, 283, 550, 1123, 1630
HpyCH4IV	ACGT	7 cut(s)	174, 189, 213, 275, 312, 890, 1042
HpyCH4V	TGCA	7 cut(s)	108, 783, 888, 1167, 1208, 1276, 1672
HpyF10VI	GCNNNNNNNGC	5 cut(s)	207, 397, 1348, 1787, 1895
HpyF3I	CTNAG	5 cut(s)	61, 392, 764, 1284, 1791
HpySE526I	ACGT	7 cut(s)	174, 189, 213, 275, 312, 890, 1042
Hsp92I	GRCGYC	2 cut(s)	189, 378
HspAI	GCGC	4 cut(s)	240, 378, 680, 1689
KasI	GGCGCC	1 cut(s)	377
Kzo9I	GATC	9 cut(s)	287, 532, 699, 811, 817, 1279, 1300, 1732, 1810
LguI	GCTCTTC	1 cut(s)	1232
LmnI	GCTCC	3 cut(s)	628, 640, 846
Lsp1109I	GCAGC	4 cut(s)	384, 767, 1220, 1688
LweI	GCATC	1 cut(s)	1700
MaeI	CTAG	4 cut(s)	246, 924, 1145, 1400
MaeII	ACGT	7 cut(s)	174, 189, 213, 275, 312, 890, 1042
MaeIII	GTNAC	7 cut(s)	177, 190, 544, 800, 1123, 1630, 1854
MalI	GATC	9 cut(s)	289, 534, 701, 813, 819, 1281, 1302, 1734, 1812
MboI	GATC	9 cut(s)	287, 532, 699, 811, 817, 1279, 1300, 1732, 1810
MflI	RGATCY	3 cut(s)	811, 1300, 1810
MhlI	GDGCHC	3 cut(s)	559, 851, 1227
MlsI	TGGCCA	2 cut(s)	1357, 1781
MluCI	AATT	7 cut(s)	577, 649, 1139, 1193, 1422, 1470, 1839
MluNI	TGGCCA	2 cut(s)	1357, 1781
Mly113I	GGCGCC	1 cut(s)	378
MlyI	GAGTC	3 cut(s)	479, 490, 1691
Mox20I	TGGCCA	2 cut(s)	1357, 1781
MroXI	GAANNNNTTC	1 cut(s)	1413
MscI	TGGCCA	2 cut(s)	1357, 1781
MseI	TTAA	6 cut(s)	519, 1110, 1232, 1263, 1383, 1683
MslI	CAYNNNNRTG	2 cut(s)	1275, 1706
Msp20I	TGGCCA	2 cut(s)	1357, 1781
MspI	CCGG	3 cut(s)	152, 182, 986
MspR9I	CCNGG	5 cut(s)	119, 588, 1354, 1359, 1910
MvaI	CCWGG	5 cut(s)	119, 588, 1354, 1359, 1910
MwoI	GCNNNNNNNGC	5 cut(s)	207, 397, 1348, 1787, 1895
NarI	GGCGCC	1 cut(s)	378
NdeI	CATATG	1 cut(s)	1000
NdeII	GATC	9 cut(s)	287, 532, 699, 811, 817, 1279, 1300, 1732, 1810
NlaIV	GGNNCC	3 cut(s)	379, 848, 1397
NmuCI	GTSAC	4 cut(s)	190, 544, 800, 1854
PagI	TCATGA	1 cut(s)	1090
PceI	AGGCCT	1 cut(s)	326
PciSI	GCTCTTC	1 cut(s)	1232
PcsI	WCGNNNNNNNCGW	1 cut(s)	287
PdmI	GAANNNNTTC	1 cut(s)	1413
PfeI	GAWTC	5 cut(s)	157, 670, 920, 1029, 1037
PinAI	ACCGGT	1 cut(s)	985
PkrI	GCNGC	4 cut(s)	399, 782, 1210, 1678
PleI	GAGTC	3 cut(s)	478, 489, 1691
PluTI	GGCGCC	1 cut(s)	381
PpsI	GAGTC	3 cut(s)	478, 489, 1691
Psp124BI	GAGCTC	1 cut(s)	1227
Psp6I	CCWGG	5 cut(s)	117, 586, 1352, 1357, 1908
PspFI	CCCAGC	1 cut(s)	1444
PspGI	CCWGG	5 cut(s)	117, 586, 1352, 1357, 1908
PspN4I	GGNNCC	3 cut(s)	379, 848, 1397
PspPI	GGNCC	2 cut(s)	366, 1395
PstI	CTGCAG	1 cut(s)	785
PstNI	CAGNNNCTG	3 cut(s)	148, 587, 1214
PsuI	RGATCY	3 cut(s)	811, 1300, 1810
RsaI	GTAC	3 cut(s)	88, 969, 1244
RsaNI	GTAC	3 cut(s)	87, 968, 1243
RseI	CAYNNNNRTG	2 cut(s)	1275, 1706
SacI	GAGCTC	1 cut(s)	1227
SapI	GCTCTTC	1 cut(s)	1232
SaqAI	TTAA	6 cut(s)	519, 1110, 1232, 1263, 1383, 1683
SatI	GCNGC	4 cut(s)	398, 781, 1209, 1677
Sau3AI	GATC	9 cut(s)	287, 532, 699, 811, 817, 1279, 1300, 1732, 1810
Sau96I	GGNCC	2 cut(s)	366, 1395
SchI	GAGTC	3 cut(s)	479, 490, 1691
ScrFI	CCNGG	5 cut(s)	119, 588, 1354, 1359, 1910
SduI	GDGCHC	3 cut(s)	559, 851, 1227
SfaNI	GCATC	1 cut(s)	1700
SfcI	CTRYAG	1 cut(s)	781
SfoI	GGCGCC	1 cut(s)	379
SinI	GGWCC	1 cut(s)	1395
SmiMI	CAYNNNNRTG	2 cut(s)	1275, 1706
SmlI	CTYRAG	2 cut(s)	1525, 1772
SmoI	CTYRAG	2 cut(s)	1525, 1772
Sse9I	AATT	7 cut(s)	577, 649, 1139, 1193, 1422, 1470, 1839
SseBI	AGGCCT	1 cut(s)	326
SsiI	CCGC	3 cut(s)	364, 405, 1898
SspDI	GGCGCC	1 cut(s)	377
SspI	AATATT	1 cut(s)	1413
SspMI	CTAG	4 cut(s)	246, 924, 1145, 1400
SstI	GAGCTC	1 cut(s)	1227
StuI	AGGCCT	1 cut(s)	326
StyD4I	CCNGG	5 cut(s)	117, 586, 1352, 1357, 1908
TaaI	ACNGT	7 cut(s)	196, 206, 233, 283, 550, 1123, 1630
TaiI	ACGT	7 cut(s)	177, 192, 216, 278, 315, 893, 1045
TaqI	TCGA	6 cut(s)	171, 290, 356, 413, 1584, 1878
TaqII	GACCGA	2 cut(s)	1383, 1864
TasI	AATT	7 cut(s)	577, 649, 1139, 1193, 1422, 1470, 1839
TatI	WGTACW	1 cut(s)	967
TfiI	GAWTC	5 cut(s)	157, 670, 920, 1029, 1037
Tru1I	TTAA	6 cut(s)	519, 1110, 1232, 1263, 1383, 1683
Tru9I	TTAA	6 cut(s)	519, 1110, 1232, 1263, 1383, 1683
TscAI	CASTG	4 cut(s)	553, 790, 1662, 1924
TseFI	GTSAC	4 cut(s)	190, 544, 800, 1854
TseI	GCWGC	4 cut(s)	397, 780, 1208, 1676
Tsp45I	GTSAC	4 cut(s)	190, 544, 800, 1854
TspDTI	ATGAA	8 cut(s)	17, 95, 208, 1017, 1079, 1163, 1821, 1847
TspGWI	ACGGA	1 cut(s)	1421
TspRI	CASTG	4 cut(s)	553, 790, 1662, 1924
VpaK11BI	GGWCC	1 cut(s)	1395
XagI	CCTNNNNNAGG	1 cut(s)	1928
XapI	RAATTY	3 cut(s)	577, 1139, 1422
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1916
XmiI	GTMKAC	1 cut(s)	1768
XmnI	GAANNNNTTC	1 cut(s)	1413
XspI	CTAG	4 cut(s)	246, 924, 1145, 1400
ZraI	GACGTC	1 cut(s)	190

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.