Rh2BG201000

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
N/A
Physical Location & Seq
Reverse (-)
18458500 .. 18460083
1584 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG201000.1

Sequence Viewer

Length: 780 bp
ATGAATAGTACAATTAGCAGGCCAGCCAATTCCTCCAACATAACATGGTCATTTAGTGTGAGCAGGAATGCTACGTACATTATCCGTGTACACTTCTGTGACATTGTTTCTAGTTCCCCTCATACTATAGTCTTTGACTTGTATTCGAATGGCAACTTCCGTAAGCAGATCGTTGGATTGGATTCCCCTTTTGCTAAAGCGTTGGCTACTCCTTTCTACTATGATTTTGTGGTGAATGCTACTGAGCCTAAACTCATTAACATCAGTATAGCCCCTAACTTGGCGAATACAACAATAGAAAATGCCTTTCTGAATGGACTGGAAATATTGGAGATATTGGAGCGAACAGCTCTAATTTATAATTTGGAAGAGTCCAAGAAGGTAAGTATGGCTCTTGTGGTTGGATCAGTTCTCGGAGGAGGCCTGTTTCTTTTCATCATTGGATTCATGTTGTGTTTGAGACACAAAAAGGCGAGAAAGAGGAACAGAGGAGGGATTTCCCACAACCTTCGGTTGAAGATATCTTTTGCTCAAATCCGGCCCACTATGGCTGAGGTGCTGTGGGATTTGGAGTATACATTGAAGCTTCATCAAACTGCGAGGCTTGGAGAAGCCCATGAGGACAGCACTACCAGTGCTTCATCAGCTTTTTTACTACCAAACATTCGGCATTTTGCTTCACTTGGTTCGACAGTTAACGGAGCTGATATAAGAAACGATGAGATGGAGTCCACAGAAAGCGAAATTTTCTCCCAACTGAGAATCGGCGAGGCCAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

259

Amino Acids

28.83

Weight (kDa)

8.54

Isoelectric Point (pI)

48.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 8 - 111 6.9e-07 Malectin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 360
AccI GTMKAC 1 cut(s) 575
AclWI GGATC 1 cut(s) 412
AcsI RAATTY 1 cut(s) 744
AfaI GTAC 3 cut(s) 10, 77, 90
AfiI CCNNNNNNNGG 1 cut(s) 280
AgsI TTSAA 2 cut(s) 517, 583
AleI CACNNNNGTG 1 cut(s) 96
AluBI AGCT 4 cut(s) 350, 586, 647, 704
AluI AGCT 4 cut(s) 350, 586, 647, 704
Alw26I GTCTC 1 cut(s) 454
AlwI GGATC 1 cut(s) 412
AoxI GGCC 4 cut(s) 20, 421, 539, 771
ApoI RAATTY 1 cut(s) 744
AspS9I GGNCC 1 cut(s) 540
AsuHPI GGTGA 1 cut(s) 244
AsuII TTCGAA 1 cut(s) 146
BbvCI CCTCAGC 1 cut(s) 552
BccI CCATC 1 cut(s) 718
BcoDI GTCTC 1 cut(s) 454
BfaI CTAG 1 cut(s) 111
BfmI CTRYAG 1 cut(s) 126
BmgT120I GGNCC 1 cut(s) 540
Bpu10I CCTNAGC 1 cut(s) 552
Bpu14I TTCGAA 1 cut(s) 146
BsaAI YACGTR 1 cut(s) 75
Bsc4I CCNNNNNNNGG 1 cut(s) 280
Bse1I ACTGG 2 cut(s) 324, 633
BseLI CCNNNNNNNGG 1 cut(s) 280
BseMII CTCAG 3 cut(s) 234, 543, 749
BseNI ACTGG 2 cut(s) 324, 633
BseRI GAGGAG 2 cut(s) 432, 504
BshFI GGCC 4 cut(s) 22, 423, 541, 773
BsiSI CCGG 1 cut(s) 538
BslI CCNNNNNNNGG 1 cut(s) 280
BsmAI GTCTC 1 cut(s) 454
BsmI GAATGC 2 cut(s) 73, 241
BsnI GGCC 4 cut(s) 22, 423, 541, 773
Bsp119I TTCGAA 1 cut(s) 146
Bsp1407I TGTACA 1 cut(s) 88
Bsp143I GATC 2 cut(s) 168, 404
BspANI GGCC 4 cut(s) 22, 423, 541, 773
BspCNI CTCAG 3 cut(s) 235, 544, 750
BspPI GGATC 1 cut(s) 412
BspT104I TTCGAA 1 cut(s) 146
BsrGI TGTACA 1 cut(s) 88
BsrI ACTGG 2 cut(s) 324, 633
BssMI GATC 2 cut(s) 168, 404
BssNAI GTATAC 1 cut(s) 576
Bst1107I GTATAC 1 cut(s) 576
Bst4CI ACNGT 1 cut(s) 694
Bst6I CTCTTC 1 cut(s) 363
BstAUI TGTACA 1 cut(s) 88
BstBAI YACGTR 1 cut(s) 75
BstBI TTCGAA 1 cut(s) 146
BstC8I GCNNGC 2 cut(s) 20, 24
BstDEI CTNAG 3 cut(s) 243, 552, 758
BstKTI GATC 2 cut(s) 171, 407
BstMAI GTCTC 1 cut(s) 454
BstMBI GATC 2 cut(s) 168, 404
BstMWI GCNNNNNNNGC 1 cut(s) 644
BstSFI CTRYAG 1 cut(s) 126
BstSNI TACGTA 1 cut(s) 75
BstZ17I GTATAC 1 cut(s) 576
BsuRI GGCC 4 cut(s) 22, 423, 541, 773
BtsIMutI CAGTG 1 cut(s) 640
Cac8I GCNNGC 2 cut(s) 20, 24
Cfr13I GGNCC 1 cut(s) 540
Csp6I GTAC 3 cut(s) 9, 76, 89
CviAII CATG 3 cut(s) 45, 448, 617
CviQI GTAC 3 cut(s) 9, 76, 89
DdeI CTNAG 3 cut(s) 243, 552, 758
DpnI GATC 2 cut(s) 170, 406
DpnII GATC 2 cut(s) 168, 404
Eam1104I CTCTTC 1 cut(s) 363
EarI CTCTTC 1 cut(s) 363
Eco105I TACGTA 1 cut(s) 75
Eco147I AGGCCT 1 cut(s) 423
Eco32I GATATC 1 cut(s) 522
EcoRV GATATC 1 cut(s) 522
FaeI CATG 3 cut(s) 48, 451, 620
FatI CATG 3 cut(s) 44, 447, 616
FblI GTMKAC 1 cut(s) 575
FspBI CTAG 1 cut(s) 111
HaeIII GGCC 4 cut(s) 22, 423, 541, 773
HapII CCGG 1 cut(s) 538
Hin1II CATG 3 cut(s) 48, 451, 620
HincII GTYRAC 1 cut(s) 697
HindII GTYRAC 1 cut(s) 697
HindIII AAGCTT 1 cut(s) 584
HinfI GANTC 5 cut(s) 182, 371, 444, 728, 762
HpaI GTTAAC 1 cut(s) 697
HpaII CCGG 1 cut(s) 538
HphI GGTGA 1 cut(s) 244
Hpy166II GTNNAC 5 cut(s) 89, 91, 576, 697, 732
Hpy188I TCNGA 2 cut(s) 312, 416
Hpy8I GTNNAC 5 cut(s) 89, 91, 576, 697, 732
HpyAV CCTTC 2 cut(s) 373, 518
HpyCH4III ACNGT 1 cut(s) 694
HpyCH4IV ACGT 1 cut(s) 74
HpyF10VI GCNNNNNNNGC 1 cut(s) 644
HpyF3I CTNAG 3 cut(s) 243, 552, 758
HpySE526I ACGT 1 cut(s) 74
Hsp92II CATG 3 cut(s) 48, 451, 620
KspAI GTTAAC 1 cut(s) 697
Kzo9I GATC 2 cut(s) 168, 404
LmnI GCTCC 2 cut(s) 340, 701
LpnPI CCDG 7 cut(s) 4, 36, 49, 305, 437, 551, 646
MaeI CTAG 1 cut(s) 111
MaeII ACGT 1 cut(s) 74
MaeIII GTNAC 1 cut(s) 98
MalI GATC 2 cut(s) 170, 406
MboI GATC 2 cut(s) 168, 404
MboII GAAGA 2 cut(s) 380, 529
MluCI AATT 5 cut(s) 12, 28, 354, 361, 744
MlyI GAGTC 2 cut(s) 380, 737
MmeI TCCRAC 3 cut(s) 60, 154, 382
MseI TTAA 2 cut(s) 258, 696
MslI CAYNNNNRTG 1 cut(s) 96
MspI CCGG 1 cut(s) 538
Mva1269I GAATGC 2 cut(s) 73, 241
MwoI GCNNNNNNNGC 1 cut(s) 644
NdeII GATC 2 cut(s) 168, 404
NlaIII CATG 3 cut(s) 48, 451, 620
NmuCI GTSAC 1 cut(s) 98
NspV TTCGAA 1 cut(s) 146
OliI CACNNNNGTG 1 cut(s) 96
PceI AGGCCT 1 cut(s) 423
PctI GAATGC 2 cut(s) 73, 241
PfeI GAWTC 3 cut(s) 182, 444, 762
PleI GAGTC 2 cut(s) 379, 736
PpsI GAGTC 2 cut(s) 379, 736
Ppu21I YACGTR 1 cut(s) 75
PsiI TTATAA 1 cut(s) 360
PspPI GGNCC 1 cut(s) 540
RsaI GTAC 3 cut(s) 10, 77, 90
RsaNI GTAC 3 cut(s) 9, 76, 89
RseI CAYNNNNRTG 1 cut(s) 96
SaqAI TTAA 2 cut(s) 258, 696
Sau3AI GATC 2 cut(s) 168, 404
Sau96I GGNCC 1 cut(s) 540
SchI GAGTC 2 cut(s) 380, 737
SetI ASST 8 cut(s) 77, 352, 384, 510, 558, 588, 649, 706
SfcI CTRYAG 1 cut(s) 126
SfuI TTCGAA 1 cut(s) 146
SmiMI CAYNNNNRTG 1 cut(s) 96
SnaBI TACGTA 1 cut(s) 75
Sse9I AATT 5 cut(s) 12, 28, 354, 361, 744
SseBI AGGCCT 1 cut(s) 423
SspI AATATT 1 cut(s) 327
SspMI CTAG 1 cut(s) 111
StuI AGGCCT 1 cut(s) 423
TaaI ACNGT 1 cut(s) 694
TaiI ACGT 1 cut(s) 77
TaqI TCGA 2 cut(s) 146, 689
TasI AATT 5 cut(s) 12, 28, 354, 361, 744
TatI WGTACW 2 cut(s) 8, 88
TfiI GAWTC 3 cut(s) 182, 444, 762
Tru1I TTAA 2 cut(s) 258, 696
Tru9I TTAA 2 cut(s) 258, 696
TscAI CASTG 1 cut(s) 640
TseFI GTSAC 1 cut(s) 98
Tsp45I GTSAC 1 cut(s) 98
TspDTI ATGAA 5 cut(s) 17, 424, 436, 578, 630
TspGWI ACGGA 3 cut(s) 74, 149, 714
TspRI CASTG 1 cut(s) 640
XapI RAATTY 1 cut(s) 744
XmiI GTMKAC 1 cut(s) 575
XspI CTAG 1 cut(s) 111
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.