Rh2BG404500
NAC Family

Inactive leucine-rich repeat receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
N/A
Physical Location & Seq
Reverse (-)
57343991 .. 57347387
3397 bp
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UTR
Exon/CDS
Intron
Rh2BG404500.1

Sequence Viewer

Length: 411 bp
ATGTCGATCCGAAATCGCCGTCGATCATCATCTTCGTCCTTGGCGAATAGAGAACCAATTCTGGTCGGACCAATTCCGTTTTGGGTGAGCTTCCTCTTTCTTTTTGAGTTCCCATTGGTTTCTCACTCCGCCGTGCCTTCGACGAGTTTAACACCACCCTCGAGACCCAGTTCAGCCAGGAATCTGGGGTCAACTTCCCAACAGAACTATCGTAGTTTCTCTTCACTTGAATATCTGGATTTCAGTTCAAACTCTCTCTTCGGTTCAGTCCCACCTATGATGTATGCAATGGTGAAACTTCAAACTCTTATCATTGTCCAATTTTTTACAACTCATCATAAGCTTGAGGAACAACAAGTTGAAAGGTCCATCACCAAATGTCAGTGGCTTACAAATGCTGGATTTAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

136

Amino Acids

15.44

Weight (kDa)

10.11

Isoelectric Point (pI)

68.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 129
AgsI TTSAA 4 cut(s) 230, 249, 302, 362
AjnI CCWGG 1 cut(s) 176
AluBI AGCT 2 cut(s) 90, 343
AluI AGCT 2 cut(s) 90, 343
Alw26I GTCTC 1 cut(s) 157
Ama87I CYCGRG 1 cut(s) 160
ArsI GACNNNNNNTTYG 1 cut(s) 36
Asp700I GAANNNNTTC 1 cut(s) 57
AspS9I GGNCC 2 cut(s) 68, 366
AsuHPI GGTGA 3 cut(s) 97, 304, 364
AvaI CYCGRG 1 cut(s) 160
AvaII GGWCC 2 cut(s) 68, 366
BarI GAAGNNNNNNTAC 2 cut(s) 205, 237
BccI CCATC 1 cut(s) 377
BceAI ACGGC 2 cut(s) 3, 116
BciT130I CCWGG 1 cut(s) 178
BcoDI GTCTC 1 cut(s) 157
Bme1390I CCNGG 1 cut(s) 178
Bme18I GGWCC 2 cut(s) 68, 366
BmeT110I CYCGRG 1 cut(s) 160
BmgT120I GGNCC 2 cut(s) 68, 366
BmrFI CCNGG 1 cut(s) 178
BmrI ACTGGG 1 cut(s) 162
BmuI ACTGGG 1 cut(s) 162
BpuEI CTTGAG 1 cut(s) 365
BsaBI GATNNNNATC 1 cut(s) 28
BsaI GGTCTC 1 cut(s) 157
BsaJI CCNNGG 1 cut(s) 39
Bse1I ACTGG 1 cut(s) 168
Bse3DI GCAATG 1 cut(s) 294
Bse8I GATNNNNATC 1 cut(s) 28
BseBI CCWGG 1 cut(s) 178
BseDI CCNNGG 1 cut(s) 39
BseJI GATNNNNATC 1 cut(s) 28
BseMI GCAATG 1 cut(s) 294
BseNI ACTGG 1 cut(s) 168
BsiHKCI CYCGRG 1 cut(s) 160
BslFI GGGAC 1 cut(s) 254
BsmAI GTCTC 1 cut(s) 157
BsmFI GGGAC 1 cut(s) 254
Bso31I GGTCTC 1 cut(s) 157
BsoBI CYCGRG 1 cut(s) 160
Bsp143I GATC 2 cut(s) 6, 23
BspACI CCGC 1 cut(s) 129
BspTNI GGTCTC 1 cut(s) 157
BsrDI GCAATG 1 cut(s) 294
BsrI ACTGG 1 cut(s) 168
BssECI CCNNGG 1 cut(s) 39
BssMI GATC 2 cut(s) 6, 23
BssT1I CCWWGG 1 cut(s) 39
Bst2UI CCWGG 1 cut(s) 178
Bst6I CTCTTC 2 cut(s) 226, 263
BstKTI GATC 2 cut(s) 9, 26
BstMAI GTCTC 1 cut(s) 157
BstMBI GATC 2 cut(s) 6, 23
BstNI CCWGG 1 cut(s) 178
BstSCI CCNGG 1 cut(s) 176
BstXI CCANNNNNNTGG 1 cut(s) 184
BtsIMutI CAGTG 1 cut(s) 389
Cfr13I GGNCC 2 cut(s) 68, 366
CviJI RGCY 4 cut(s) 90, 176, 343, 388
CviKI_1 RGCY 4 cut(s) 90, 176, 343, 388
DpnI GATC 2 cut(s) 8, 25
DpnII GATC 2 cut(s) 6, 23
Eam1104I CTCTTC 2 cut(s) 226, 263
EarI CTCTTC 2 cut(s) 226, 263
EciI GGCGGA 1 cut(s) 118
Eco130I CCWWGG 1 cut(s) 39
Eco31I GGTCTC 1 cut(s) 157
Eco47I GGWCC 2 cut(s) 68, 366
Eco88I CYCGRG 1 cut(s) 160
EcoRII CCWGG 1 cut(s) 176
EcoT14I CCWWGG 1 cut(s) 39
ErhI CCWWGG 1 cut(s) 39
FaiI YATR 3 cut(s) 278, 285, 339
FaqI GGGAC 1 cut(s) 254
HincII GTYRAC 1 cut(s) 192
HindII GTYRAC 1 cut(s) 192
HindIII AAGCTT 1 cut(s) 341
HinfI GANTC 1 cut(s) 181
HphI GGTGA 3 cut(s) 97, 304, 364
Hpy166II GTNNAC 1 cut(s) 192
Hpy188I TCNGA 2 cut(s) 11, 68
Hpy188III TCNNGA 2 cut(s) 162, 236
Hpy8I GTNNAC 1 cut(s) 192
Hpy99I CGWCG 2 cut(s) 24, 145
HpyAV CCTTC 1 cut(s) 147
HpyCH4V TGCA 1 cut(s) 287
Kzo9I GATC 2 cut(s) 6, 23
LpnPI CCDG 7 cut(s) 47, 163, 170, 181, 190, 221, 384
MalI GATC 2 cut(s) 8, 25
MboI GATC 2 cut(s) 6, 23
MboII GAAGA 3 cut(s) 24, 213, 250
MluCI AATT 3 cut(s) 57, 72, 320
MmeI TCCRAC 1 cut(s) 46
MnlI CCTC 3 cut(s) 104, 169, 340
MroXI GAANNNNTTC 1 cut(s) 57
MseI TTAA 2 cut(s) 149, 405
MspR9I CCNGG 1 cut(s) 178
MvaI CCWGG 1 cut(s) 178
NdeII GATC 2 cut(s) 6, 23
PaeR7I CTCGAG 1 cut(s) 160
PcsI WCGNNNNNNNCGW 1 cut(s) 41
PdmI GAANNNNTTC 1 cut(s) 57
PfeI GAWTC 1 cut(s) 181
Psp6I CCWGG 1 cut(s) 176
PspGI CCWGG 1 cut(s) 176
PspPI GGNCC 2 cut(s) 68, 366
SaqAI TTAA 2 cut(s) 149, 405
Sau3AI GATC 2 cut(s) 6, 23
Sau96I GGNCC 2 cut(s) 68, 366
ScrFI CCNGG 1 cut(s) 178
SetI ASST 4 cut(s) 92, 277, 345, 368
Sfr274I CTCGAG 1 cut(s) 160
SinI GGWCC 2 cut(s) 68, 366
SlaI CTCGAG 1 cut(s) 160
SmlI CTYRAG 2 cut(s) 160, 344
SmoI CTYRAG 2 cut(s) 160, 344
Sse9I AATT 3 cut(s) 57, 72, 320
SsiI CCGC 1 cut(s) 129
StyD4I CCNGG 1 cut(s) 176
StyI CCWWGG 1 cut(s) 39
TaqI TCGA 4 cut(s) 5, 22, 140, 161
TasI AATT 3 cut(s) 57, 72, 320
TfiI GAWTC 1 cut(s) 181
Tru1I TTAA 2 cut(s) 149, 405
Tru9I TTAA 2 cut(s) 149, 405
TscAI CASTG 1 cut(s) 389
TspGWI ACGGA 1 cut(s) 66
TspRI CASTG 1 cut(s) 389
VpaK11BI GGWCC 2 cut(s) 68, 366
XcmI CCANNNNNNNNNTGG 1 cut(s) 78
XhoI CTCGAG 1 cut(s) 160
XmnI GAANNNNTTC 1 cut(s) 57
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.