Rh2BG483400

Protein kinase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
N/A
Physical Location & Seq
Forward (+)
68384648 .. 68397962
13315 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG483400.1

Sequence Viewer

Length: 786 bp
ATGAGTGAATCAGACTATTTTAAGGCCATGGAAAAGCTCGAGAAGAAGAGGAAAAGAATTCAGGAGGAAGAGCCGGATTCTGGCAACGTCGGTCGGACCAAACGGTGGGTTCGACAAAGGTTCCTCGGCGCAGGACAATTCGGTACGGTTTTCTTGGCTAGTCCGGCCAAACCAGGTTCCAAACTGCCGCCGGTTATGGCCGTGAAGTCGGCGATGCTCTCGGAATCTGCCGACTTGGTTAAAGAAAGTCGACTTCTCAAGAAATTCAAGAACTGCCCTTTTATCCTTGACACTTACGGCAGCGATGTGACTAAAGATGTTGAAGTGATGAGTGAATCAGACTATTTTAAGGCCATGGAAAAGCTCGAGAAGAAGAGGAAAAGAATCCAGGAGGAAGAGCCGGATTCTGGCAACGTCGGTCGTACCAAACGGTGGGTTCGACAAAGGTTCCTCGGCGCAGGACAATTCGGTACGGTTTTCTTGGCTAGTCCGGCCAAACCAGGTTCCAAACTGCCGCCGGTTATGGCCGTGAAGTCGGCGATGCTCTCGGAATCTGCCGACTTGGTTAAAGAAAGTCGACTTCTCAAGAAATTCAAGAACTGCCCTTTTATCCTTGACACTTACGGCAGCGATGTGACTAAAGATGTTGAAGCTTGCGAATATGGACAGTCTCGTCTGGTGAATTGGTTCCAAGAAGCCGGGTTTGCCAAGGACCAGCTGCAATTCCTCTACTGGGTGCGGCATAATGTCATTGTTCTAATTGTGTTCTGTAACTGTAAAGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

261

Amino Acids

29.63

Weight (kDa)

9.47

Isoelectric Point (pI)

51.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 672
AccB7I CCANNNNNTGG 2 cut(s) 105, 432
AccI GTMKAC 2 cut(s) 250, 577
AciI CCGC 3 cut(s) 188, 515, 739
AcoI YGGCCR 4 cut(s) 165, 198, 492, 525
AcsI RAATTY 3 cut(s) 57, 263, 590
AfaI GTAC 3 cut(s) 145, 424, 472
AfiI CCNNNNNNNGG 5 cut(s) 80, 105, 407, 432, 733
AgsI TTSAA 4 cut(s) 268, 323, 595, 650
AjnI CCWGG 3 cut(s) 172, 387, 499
AluBI AGCT 4 cut(s) 37, 364, 653, 718
AluI AGCT 4 cut(s) 37, 364, 653, 718
Alw26I GTCTC 1 cut(s) 675
Ama87I CYCGRG 2 cut(s) 38, 365
AoxI GGCC 6 cut(s) 24, 165, 198, 351, 492, 525
ApeKI GCWGC 3 cut(s) 300, 627, 718
ApoI RAATTY 3 cut(s) 57, 263, 590
Asp700I GAANNNNTTC 1 cut(s) 686
AspLEI GCGC 2 cut(s) 131, 458
AspS9I GGNCC 2 cut(s) 96, 712
AsuC2I CCSGG 1 cut(s) 700
AsuHPI GGTGA 1 cut(s) 691
AvaI CYCGRG 2 cut(s) 38, 365
AvaII GGWCC 2 cut(s) 96, 712
BbvI GCAGC 3 cut(s) 312, 639, 705
BceAI ACGGC 4 cut(s) 185, 313, 512, 640
BciT130I CCWGG 3 cut(s) 174, 389, 501
BcnI CCSGG 1 cut(s) 700
BcoDI GTCTC 1 cut(s) 675
BfaI CTAG 2 cut(s) 159, 486
BisI GCNGC 6 cut(s) 188, 301, 515, 628, 719, 740
BlsI GCNGC 6 cut(s) 189, 302, 516, 629, 720, 741
Bme1390I CCNGG 4 cut(s) 174, 389, 501, 700
Bme18I GGWCC 2 cut(s) 96, 712
BmeT110I CYCGRG 2 cut(s) 38, 365
BmgT120I GGNCC 2 cut(s) 96, 712
BmiI GGNNCC 5 cut(s) 122, 178, 449, 505, 689
BmrFI CCNGG 4 cut(s) 174, 389, 501, 700
BmrI ACTGGG 1 cut(s) 742
BmsI GCATC 2 cut(s) 204, 531
BmuI ACTGGG 1 cut(s) 742
BpuEI CTTGAG 2 cut(s) 242, 569
BpuMI CCSGG 1 cut(s) 700
BsaJI CCNNGG 5 cut(s) 27, 124, 354, 451, 708
Bsc4I CCNNNNNNNGG 5 cut(s) 80, 105, 407, 432, 733
Bse118I RCCGGY 2 cut(s) 190, 517
Bse1I ACTGG 1 cut(s) 737
BseBI CCWGG 3 cut(s) 174, 389, 501
BseDI CCNNGG 5 cut(s) 27, 124, 354, 451, 708
BseLI CCNNNNNNNGG 5 cut(s) 80, 105, 407, 432, 733
BseNI ACTGG 1 cut(s) 737
BseXI GCAGC 3 cut(s) 312, 639, 705
Bsh1285I CGRYCG 2 cut(s) 94, 421
BshFI GGCC 6 cut(s) 26, 167, 200, 353, 494, 527
BsiEI CGRYCG 2 cut(s) 94, 421
BsiHKCI CYCGRG 2 cut(s) 38, 365
BsiSI CCGG 7 cut(s) 74, 164, 191, 401, 491, 518, 699
BslI CCNNNNNNNGG 5 cut(s) 80, 105, 407, 432, 733
BsmAI GTCTC 1 cut(s) 675
BsnI GGCC 6 cut(s) 26, 167, 200, 353, 494, 527
BsoBI CYCGRG 2 cut(s) 38, 365
Bsp19I CCATGG 2 cut(s) 27, 354
BspACI CCGC 3 cut(s) 188, 515, 739
BspANI GGCC 6 cut(s) 26, 167, 200, 353, 494, 527
BspLI GGNNCC 5 cut(s) 122, 178, 449, 505, 689
BspQI GCTCTTC 2 cut(s) 63, 390
BsrFI RCCGGY 2 cut(s) 190, 517
BsrI ACTGG 1 cut(s) 737
BssAI RCCGGY 2 cut(s) 190, 517
BssECI CCNNGG 5 cut(s) 27, 124, 354, 451, 708
BssT1I CCWWGG 3 cut(s) 27, 354, 708
Bst2UI CCWGG 3 cut(s) 174, 389, 501
Bst4CI ACNGT 6 cut(s) 105, 148, 432, 475, 669, 776
Bst6I CTCTTC 4 cut(s) 41, 63, 368, 390
BstC8I GCNNGC 1 cut(s) 655
BstDSI CCRYGG 2 cut(s) 27, 354
BstHHI GCGC 2 cut(s) 131, 458
BstMAI GTCTC 1 cut(s) 675
BstMCI CGRYCG 2 cut(s) 94, 421
BstMWI GCNNNNNNNGC 3 cut(s) 164, 491, 704
BstNI CCWGG 3 cut(s) 174, 389, 501
BstSCI CCNGG 4 cut(s) 172, 387, 499, 698
BstV1I GCAGC 3 cut(s) 312, 639, 705
BsuRI GGCC 6 cut(s) 26, 167, 200, 353, 494, 527
BtgI CCRYGG 2 cut(s) 27, 354
BtgZI GCGATG 4 cut(s) 227, 318, 554, 645
Cac8I GCNNGC 1 cut(s) 655
CfoI GCGC 2 cut(s) 131, 458
Cfr10I RCCGGY 2 cut(s) 190, 517
Cfr13I GGNCC 2 cut(s) 96, 712
CsiI ACCWGGT 2 cut(s) 172, 499
Csp6I GTAC 3 cut(s) 144, 423, 471
CviAII CATG 2 cut(s) 28, 355
CviQI GTAC 3 cut(s) 144, 423, 471
DrdI GACNNNNNNGTC 1 cut(s) 672
DseDI GACNNNNNNGTC 1 cut(s) 672
EaeI YGGCCR 4 cut(s) 165, 198, 492, 525
Eam1104I CTCTTC 4 cut(s) 41, 63, 368, 390
EarI CTCTTC 4 cut(s) 41, 63, 368, 390
Eco130I CCWWGG 3 cut(s) 27, 354, 708
Eco47I GGWCC 2 cut(s) 96, 712
Eco88I CYCGRG 2 cut(s) 38, 365
EcoRI GAATTC 1 cut(s) 57
EcoRII CCWGG 3 cut(s) 172, 387, 499
EcoT14I CCWWGG 3 cut(s) 27, 354, 708
ErhI CCWWGG 3 cut(s) 27, 354, 708
FaeI CATG 2 cut(s) 31, 358
FaiI YATR 6 cut(s) 29, 197, 356, 524, 663, 744
FatI CATG 2 cut(s) 27, 354
FblI GTMKAC 2 cut(s) 250, 577
Fnu4HI GCNGC 6 cut(s) 188, 301, 515, 628, 719, 740
Fsp4HI GCNGC 6 cut(s) 188, 301, 515, 628, 719, 740
FspBI CTAG 2 cut(s) 159, 486
GlaI GCGC 2 cut(s) 130, 457
GluI GCNGC 6 cut(s) 188, 301, 515, 628, 719, 740
HaeIII GGCC 6 cut(s) 26, 167, 200, 353, 494, 527
HapII CCGG 7 cut(s) 74, 164, 191, 401, 491, 518, 699
HhaI GCGC 2 cut(s) 131, 458
Hin1II CATG 2 cut(s) 31, 358
Hin6I GCGC 2 cut(s) 129, 456
HinP1I GCGC 2 cut(s) 129, 456
HincII GTYRAC 2 cut(s) 251, 578
HindII GTYRAC 2 cut(s) 251, 578
HindIII AAGCTT 1 cut(s) 651
HinfI GANTC 7 cut(s) 8, 77, 224, 335, 384, 404, 551
HpaII CCGG 7 cut(s) 74, 164, 191, 401, 491, 518, 699
HphI GGTGA 1 cut(s) 691
Hpy166II GTNNAC 2 cut(s) 251, 578
Hpy188I TCNGA 5 cut(s) 13, 96, 223, 340, 550
Hpy188III TCNNGA 7 cut(s) 40, 62, 259, 268, 367, 586, 595
Hpy8I GTNNAC 2 cut(s) 251, 578
Hpy99I CGWCG 2 cut(s) 92, 419
HpyCH4III ACNGT 6 cut(s) 105, 148, 432, 475, 669, 776
HpyCH4IV ACGT 2 cut(s) 87, 414
HpyCH4V TGCA 1 cut(s) 721
HpyF10VI GCNNNNNNNGC 3 cut(s) 164, 491, 704
HpySE526I ACGT 2 cut(s) 87, 414
Hsp92II CATG 2 cut(s) 31, 358
HspAI GCGC 2 cut(s) 129, 456
LguI GCTCTTC 2 cut(s) 63, 390
Lsp1109I GCAGC 3 cut(s) 312, 639, 705
LweI GCATC 2 cut(s) 204, 531
MabI ACCWGGT 2 cut(s) 172, 499
MaeI CTAG 2 cut(s) 159, 486
MaeII ACGT 2 cut(s) 87, 414
MaeIII GTNAC 3 cut(s) 307, 634, 770
MboII GAAGA 6 cut(s) 55, 58, 80, 382, 385, 407
MluCI AATT 8 cut(s) 57, 137, 263, 464, 590, 682, 722, 759
MmeI TCCRAC 1 cut(s) 74
MnlI CCTC 7 cut(s) 42, 58, 134, 369, 385, 461, 737
MroXI GAANNNNTTC 1 cut(s) 686
MseI TTAA 4 cut(s) 21, 240, 348, 567
MspA1I CMGCKG 1 cut(s) 718
MspI CCGG 7 cut(s) 74, 164, 191, 401, 491, 518, 699
MspR9I CCNGG 4 cut(s) 174, 389, 501, 700
MvaI CCWGG 3 cut(s) 174, 389, 501
MwoI GCNNNNNNNGC 3 cut(s) 164, 491, 704
NciI CCSGG 1 cut(s) 700
NcoI CCATGG 2 cut(s) 27, 354
NlaIII CATG 2 cut(s) 31, 358
NlaIV GGNNCC 5 cut(s) 122, 178, 449, 505, 689
NmeAIII GCCGAG 2 cut(s) 105, 432
NmuCI GTSAC 2 cut(s) 307, 634
PaeR7I CTCGAG 2 cut(s) 38, 365
PciSI GCTCTTC 2 cut(s) 63, 390
PcsI WCGNNNNNNNCGW 2 cut(s) 109, 436
PdmI GAANNNNTTC 1 cut(s) 686
PfeI GAWTC 7 cut(s) 8, 77, 224, 335, 384, 404, 551
PflMI CCANNNNNTGG 2 cut(s) 105, 432
PfoI TCCNGGA 1 cut(s) 387
PkrI GCNGC 6 cut(s) 189, 302, 516, 629, 720, 741
Psp6I CCWGG 3 cut(s) 172, 387, 499
PspGI CCWGG 3 cut(s) 172, 387, 499
PspN4I GGNNCC 5 cut(s) 122, 178, 449, 505, 689
PspPI GGNCC 2 cut(s) 96, 712
PvuII CAGCTG 1 cut(s) 718
RsaI GTAC 3 cut(s) 145, 424, 472
RsaNI GTAC 3 cut(s) 144, 423, 471
SalI GTCGAC 2 cut(s) 249, 576
SapI GCTCTTC 2 cut(s) 63, 390
SaqAI TTAA 4 cut(s) 21, 240, 348, 567
SatI GCNGC 6 cut(s) 188, 301, 515, 628, 719, 740
Sau96I GGNCC 2 cut(s) 96, 712
ScrFI CCNGG 4 cut(s) 174, 389, 501, 700
SexAI ACCWGGT 2 cut(s) 172, 499
SfaNI GCATC 2 cut(s) 204, 531
Sfr274I CTCGAG 2 cut(s) 38, 365
SinI GGWCC 2 cut(s) 96, 712
SlaI CTCGAG 2 cut(s) 38, 365
SmlI CTYRAG 4 cut(s) 38, 257, 365, 584
SmoI CTYRAG 4 cut(s) 38, 257, 365, 584
Sse9I AATT 8 cut(s) 57, 137, 263, 464, 590, 682, 722, 759
SsiI CCGC 3 cut(s) 188, 515, 739
SspMI CTAG 2 cut(s) 159, 486
StyD4I CCNGG 4 cut(s) 172, 387, 499, 698
StyI CCWWGG 3 cut(s) 27, 354, 708
TaaI ACNGT 6 cut(s) 105, 148, 432, 475, 669, 776
TaiI ACGT 2 cut(s) 90, 417
TaqI TCGA 6 cut(s) 39, 112, 250, 366, 439, 577
TaqII GACCGA 2 cut(s) 80, 407
TasI AATT 8 cut(s) 57, 137, 263, 464, 590, 682, 722, 759
TauI GCSGC 3 cut(s) 190, 517, 742
TfiI GAWTC 7 cut(s) 8, 77, 224, 335, 384, 404, 551
Tru1I TTAA 4 cut(s) 21, 240, 348, 567
Tru9I TTAA 4 cut(s) 21, 240, 348, 567
TseFI GTSAC 2 cut(s) 307, 634
TseI GCWGC 3 cut(s) 300, 627, 718
Tsp45I GTSAC 2 cut(s) 307, 634
Van91I CCANNNNNTGG 2 cut(s) 105, 432
VpaK11BI GGWCC 2 cut(s) 96, 712
XapI RAATTY 3 cut(s) 57, 263, 590
XhoI CTCGAG 2 cut(s) 38, 365
XmiI GTMKAC 2 cut(s) 250, 577
XmnI GAANNNNTTC 1 cut(s) 686
XspI CTAG 2 cut(s) 159, 486
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.