Rh2CG062900
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
N/A
Physical Location & Seq
Forward (+)
5151620 .. 5152658
1039 bp
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UTR
Exon/CDS
Intron
Rh2CG062900.1

Sequence Viewer

Length: 366 bp
ATGACCTGTTTAGGTGGTATTCCGAGCATAAAATGGTCGGGGATAGACGGCGAGGACAATGTGCTGGTTCTTGATCTGCTGGGACCAAGTCTTGAGGATTTGTTTGTGTATTGCGGGAGAAAGTTTTCGCTCAAGAGTGTCTTGCTGGAGAATAAAAACTTGACAGGAACTGCTCGTTATGCTAGCTGCAACACTCATCTTGGAATTGAGCAAAGCCGGAGGGATGATTTGGAGTCTCTTGGATATGTTCTTCTATATTTTCTGAGAGGAAGGTATAAATTCTTTTGTTCTTTGCTCAACTGCTCAAGACAACAATTTTCTTCTCTGGGGTTGGTAGTCATAAAAGGATGTTTAAACTACTTTTAA

Protein Analysis

121

Amino Acids

13.59

Weight (kDa)

8.23

Isoelectric Point (pI)

39.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 114
AcsI RAATTY 1 cut(s) 278
AluBI AGCT 1 cut(s) 186
AluI AGCT 1 cut(s) 186
Alw26I GTCTC 1 cut(s) 240
AlwNI CAGNNNCTG 1 cut(s) 170
ApeKI GCWGC 1 cut(s) 186
ApoI RAATTY 1 cut(s) 278
Asp700I GAANNNNTTC 1 cut(s) 124
AspS9I GGNCC 1 cut(s) 83
AsuNHI GCTAGC 1 cut(s) 182
AvaII GGWCC 1 cut(s) 83
BbvI GCAGC 1 cut(s) 173
BceAI ACGGC 1 cut(s) 64
BcoDI GTCTC 1 cut(s) 240
BfaI CTAG 1 cut(s) 183
BisI GCNGC 1 cut(s) 187
BlsI GCNGC 1 cut(s) 188
Bme18I GGWCC 1 cut(s) 83
BmgT120I GGNCC 1 cut(s) 83
BmiI GGNNCC 1 cut(s) 84
BmtI GCTAGC 1 cut(s) 186
BpmI CTGGAG 1 cut(s) 167
BpuEI CTTGAG 3 cut(s) 113, 116, 289
BseGI GGATG 2 cut(s) 229, 353
BseMII CTCAG 1 cut(s) 254
BseXI GCAGC 1 cut(s) 173
BseYI CCCAGC 1 cut(s) 79
BsiSI CCGG 1 cut(s) 217
BslFI GGGAC 1 cut(s) 96
BsmAI GTCTC 1 cut(s) 240
BsmFI GGGAC 1 cut(s) 96
Bsp143I GATC 1 cut(s) 73
BspACI CCGC 1 cut(s) 114
BspCNI CTCAG 1 cut(s) 255
BspLI GGNNCC 1 cut(s) 84
BspOI GCTAGC 1 cut(s) 186
BssMI GATC 1 cut(s) 73
BstC8I GCNNGC 1 cut(s) 184
BstDEI CTNAG 1 cut(s) 263
BstF5I GGATG 2 cut(s) 229, 353
BstKTI GATC 1 cut(s) 76
BstMAI GTCTC 1 cut(s) 240
BstMBI GATC 1 cut(s) 73
BstMWI GCNNNNNNNGC 1 cut(s) 179
BstV1I GCAGC 1 cut(s) 173
BtsCI GGATG 2 cut(s) 229, 353
Cac8I GCNNGC 1 cut(s) 184
CaiI CAGNNNCTG 1 cut(s) 170
Cfr13I GGNCC 1 cut(s) 83
CviJI RGCY 2 cut(s) 186, 216
CviKI_1 RGCY 2 cut(s) 186, 216
DdeI CTNAG 1 cut(s) 263
DpnI GATC 1 cut(s) 75
DpnII GATC 1 cut(s) 73
DraI TTTAAA 1 cut(s) 354
Eco47I GGWCC 1 cut(s) 83
FaiI YATR 6 cut(s) 29, 180, 246, 256, 276, 341
FalI AAGNNNNNCTT 2 cut(s) 125, 157
FaqI GGGAC 1 cut(s) 96
FauI CCCGC 1 cut(s) 107
Fnu4HI GCNGC 1 cut(s) 187
FokI GGATG 2 cut(s) 236, 360
Fsp4HI GCNGC 1 cut(s) 187
FspBI CTAG 1 cut(s) 183
GluI GCNGC 1 cut(s) 187
GsaI CCCAGC 1 cut(s) 83
GsuI CTGGAG 1 cut(s) 167
HapII CCGG 1 cut(s) 217
HinfI GANTC 1 cut(s) 233
HpaII CCGG 1 cut(s) 217
Hpy188I TCNGA 2 cut(s) 24, 264
Hpy188III TCNNGA 4 cut(s) 71, 92, 133, 306
HpyAV CCTTC 1 cut(s) 264
HpyCH4V TGCA 1 cut(s) 189
HpyF10VI GCNNNNNNNGC 1 cut(s) 179
HpyF3I CTNAG 1 cut(s) 263
Kzo9I GATC 1 cut(s) 73
LpnPI CCDG 7 cut(s) 19, 50, 65, 131, 150, 230, 311
Lsp1109I GCAGC 1 cut(s) 173
MaeI CTAG 1 cut(s) 183
MalI GATC 1 cut(s) 75
MboI GATC 1 cut(s) 73
MboII GAAGA 2 cut(s) 242, 312
MluCI AATT 3 cut(s) 204, 278, 314
MlyI GAGTC 1 cut(s) 242
MnlI CCTC 4 cut(s) 46, 88, 213, 260
MroXI GAANNNNTTC 1 cut(s) 124
MseI TTAA 2 cut(s) 353, 364
MspI CCGG 1 cut(s) 217
MssI GTTTAAAC 1 cut(s) 354
MwoI GCNNNNNNNGC 1 cut(s) 179
NdeII GATC 1 cut(s) 73
NheI GCTAGC 1 cut(s) 182
NlaIV GGNNCC 1 cut(s) 84
PdmI GAANNNNTTC 1 cut(s) 124
PflFI GACNNNGTC 1 cut(s) 87
PkrI GCNGC 1 cut(s) 188
PleI GAGTC 1 cut(s) 241
PmeI GTTTAAAC 1 cut(s) 354
PpsI GAGTC 1 cut(s) 241
PspFI CCCAGC 1 cut(s) 79
PspN4I GGNNCC 1 cut(s) 84
PspPI GGNCC 1 cut(s) 83
PstNI CAGNNNCTG 1 cut(s) 170
PsyI GACNNNGTC 1 cut(s) 87
SaqAI TTAA 2 cut(s) 353, 364
SatI GCNGC 1 cut(s) 187
Sau3AI GATC 1 cut(s) 73
Sau96I GGNCC 1 cut(s) 83
SchI GAGTC 1 cut(s) 242
SetI ASST 4 cut(s) 8, 16, 188, 275
SinI GGWCC 1 cut(s) 83
SmlI CTYRAG 3 cut(s) 92, 131, 304
SmoI CTYRAG 3 cut(s) 92, 131, 304
Sse9I AATT 3 cut(s) 204, 278, 314
SsiI CCGC 1 cut(s) 114
SspMI CTAG 1 cut(s) 183
TasI AATT 3 cut(s) 204, 278, 314
Tru1I TTAA 2 cut(s) 353, 364
Tru9I TTAA 2 cut(s) 353, 364
TseI GCWGC 1 cut(s) 186
Tth111I GACNNNGTC 1 cut(s) 87
VpaK11BI GGWCC 1 cut(s) 83
XapI RAATTY 1 cut(s) 278
XmnI GAANNNNTTC 1 cut(s) 124
XspI CTAG 1 cut(s) 183
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.